Click here to switch to the map view.

The map label for this gene is iscR [H]

Identifier: 83593363

GI number: 83593363

Start: 2341253

End: 2341717

Strand: Reverse

Name: iscR [H]

Synonym: Rru_A2028

Alternate gene names: 83593363

Gene position: 2341717-2341253 (Counterclockwise)

Preceding gene: 83593364

Following gene: 83593362

Centisome position: 53.8

GC content: 63.23

Gene sequence:

>465_bases
ATGAGGTTGAGCACGAAGGGTCGCTATGCGGTGATGGCCATGGCCGACCTTGCCGCCCATTCCGGGGGCAAGCCGGTGGC
TTTGGCCGATATCGCCGATCGCCAGGAAATTTCCCTGTCCTATCTGGAGCAGCTGTTTGGCCGCTTGCGCAAGGGCGGGC
TGGTCAAAAGCGTGCGCGGCCCCGGCGGCGGCTATCTTCTGTCGCGCGAGGCCGGAGATATGCGGATTTCCGATATCATC
CTGGCCGTCGACGAACCGATCCAGACCACCCGCTGCTCGCCGGGCTCGCCGGCCGGCTGCCACAACAACAAGGGCCGCTG
TATGACCCATGACCTGTGGGAAGAACTGGCCAATCAGATCTATCTTTATCTCAGCAGCGTCTCGCTTGAAGATGTCACCC
AGCGCCGGGTCCTTGGCACCAGCGGCCTGATCGGCGAGATGCCCCCCATCGTCGCGGTGCAGTGA

Upstream 100 bases:

>100_bases
CGGAGCGCGGGTTAATGGATAACAACGAACGCACGCCCAAGCGTGTGGTGAATGGCACCGCGCATCCATGCGCGCCCGAC
GTCTGAGAGGAATTTAAGTC

Downstream 100 bases:

>100_bases
CCCACGCCGGCGTCTATCTCGACCACAACGCCACCACGGCGCTGCGCCCCGAAGCGGTCGCGGCGATCACCGCCGCCCTG
GAGGTTCTTGGCAATCCGTC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRLSTKGRYAVMAMADLAAHSGGKPVALADIADRQEISLSYLEQLFGRLRKGGLVKSVRGPGGGYLLSREAGDMRISDII
LAVDEPIQTTRCSPGSPAGCHNNKGRCMTHDLWEELANQIYLYLSSVSLEDVTQRRVLGTSGLIGEMPPIVAVQ

Sequences:

>Translated_154_residues
MRLSTKGRYAVMAMADLAAHSGGKPVALADIADRQEISLSYLEQLFGRLRKGGLVKSVRGPGGGYLLSREAGDMRISDII
LAVDEPIQTTRCSPGSPAGCHNNKGRCMTHDLWEELANQIYLYLSSVSLEDVTQRRVLGTSGLIGEMPPIVAVQ
>Mature_154_residues
MRLSTKGRYAVMAMADLAAHSGGKPVALADIADRQEISLSYLEQLFGRLRKGGLVKSVRGPGGGYLLSREAGDMRISDII
LAVDEPIQTTRCSPGSPAGCHNNKGRCMTHDLWEELANQIYLYLSSVSLEDVTQRRVLGTSGLIGEMPPIVAVQ

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=143, Percent_Identity=51.0489510489511, Blast_Score=136, Evalue=8e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16614; Mature: 16614

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSTKGRYAVMAMADLAAHSGGKPVALADIADRQEISLSYLEQLFGRLRKGGLVKSVRG
CCCCCCCCEEEEHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCC
PGGGYLLSREAGDMRISDIILAVDEPIQTTRCSPGSPAGCHNNKGRCMTHDLWEELANQI
CCCCEEEECCCCCEEEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCEECHHHHHHHHHHH
YLYLSSVSLEDVTQRRVLGTSGLIGEMPPIVAVQ
HHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MRLSTKGRYAVMAMADLAAHSGGKPVALADIADRQEISLSYLEQLFGRLRKGGLVKSVRG
CCCCCCCCEEEEHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCC
PGGGYLLSREAGDMRISDIILAVDEPIQTTRCSPGSPAGCHNNKGRCMTHDLWEELANQI
CCCCEEEECCCCCEEEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCEECHHHHHHHHHHH
YLYLSSVSLEDVTQRRVLGTSGLIGEMPPIVAVQ
HHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]