| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593321
Identifier: 83593321
GI number: 83593321
Start: 2295831
End: 2296550
Strand: Reverse
Name: 83593321
Synonym: Rru_A1986
Alternate gene names: NA
Gene position: 2296550-2295831 (Counterclockwise)
Preceding gene: 83593322
Following gene: 83593318
Centisome position: 52.76
GC content: 59.58
Gene sequence:
>720_bases ATGGGCGACCAGGAGTTCGTGGTCAAGAGCGCCTTCTCGTATTCCGATGCGGTGATCGACGCCTTGGAGACGTCGTTGTC GCCGGAACGTATGGAGACCTACGCCAAACGGTCGGGCAATGATCGCGAGAAGGCTGTTCGCCTTTATACATGGAACACGG CGATCAGCGCGGCCTTCTATGGGCCCCTTCAGGGGTTGGAAGTCGCCTTGCGTAACGCGTTGCATCGCGAGCTTGCGGAA AAATACGGCACCAATTGGTATGATAATCCTGCGGCGGGGCTGGATGACGGAACGCTTAAGCGCCTATCAAGGGCTCGATC GGAGCTGCGCCGGGGCAGATACGCCGATGATCCGTCCCATATGGTGGCGGCGCTTTCGTTTGGGTTTTGGGTCGCCCTTC TGGGGGCCGGCGGGCGGACGCCCGATGGAGGGAAGGCCAACTACGAAATGACCATCTGGCGTTCTGGCGTATTCCGGTCT TTTCCTCACGTCCGTCTCAGTCGTAAAGCTGTCCATGAGCCGCTCGATTATCTACGGACGTTTCGTAACCGGATCGCGCA CCACGAACCCATTTTCGATCGGCATCTAGCCGCCGACTATGACTCCCTGCTGCGCGTCGTCGGGTGGATCAATCCCAAGA CACGGGACTGGATCGAGCATCACAGCCGCGTACCGACGCTTCTTGCGCAGTCGGCCGACGACCCGGGACTGACATTCTAG
Upstream 100 bases:
>100_bases GCTTTGGCATGGGGGAGGGGAAAACGTCTCAGCCCTAAAAAAGCTGAGCCCCGGGCGCATGCCAATGGCAGAGGCGAACC CAGGGCCTACGGGGGGTAAT
Downstream 100 bases:
>100_bases AGTGGTGTGGGTGAACTCCGCTCTAAGCGCCGTTTTCGGGAAACAGGGCTATGAAAAAGAGAGGGGGGAGGTGAAGCGTC TGGCGGCTTTTTGGGGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MGDQEFVVKSAFSYSDAVIDALETSLSPERMETYAKRSGNDREKAVRLYTWNTAISAAFYGPLQGLEVALRNALHRELAE KYGTNWYDNPAAGLDDGTLKRLSRARSELRRGRYADDPSHMVAALSFGFWVALLGAGGRTPDGGKANYEMTIWRSGVFRS FPHVRLSRKAVHEPLDYLRTFRNRIAHHEPIFDRHLAADYDSLLRVVGWINPKTRDWIEHHSRVPTLLAQSADDPGLTF
Sequences:
>Translated_239_residues MGDQEFVVKSAFSYSDAVIDALETSLSPERMETYAKRSGNDREKAVRLYTWNTAISAAFYGPLQGLEVALRNALHRELAE KYGTNWYDNPAAGLDDGTLKRLSRARSELRRGRYADDPSHMVAALSFGFWVALLGAGGRTPDGGKANYEMTIWRSGVFRS FPHVRLSRKAVHEPLDYLRTFRNRIAHHEPIFDRHLAADYDSLLRVVGWINPKTRDWIEHHSRVPTLLAQSADDPGLTF >Mature_238_residues GDQEFVVKSAFSYSDAVIDALETSLSPERMETYAKRSGNDREKAVRLYTWNTAISAAFYGPLQGLEVALRNALHRELAEK YGTNWYDNPAAGLDDGTLKRLSRARSELRRGRYADDPSHMVAALSFGFWVALLGAGGRTPDGGKANYEMTIWRSGVFRSF PHVRLSRKAVHEPLDYLRTFRNRIAHHEPIFDRHLAADYDSLLRVVGWINPKTRDWIEHHSRVPTLLAQSADDPGLTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27081; Mature: 26949
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDQEFVVKSAFSYSDAVIDALETSLSPERMETYAKRSGNDREKAVRLYTWNTAISAAFY CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHEEEEEEEHHHHHHHHH GPLQGLEVALRNALHRELAEKYGTNWYDNPAAGLDDGTLKRLSRARSELRRGRYADDPSH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH MVAALSFGFWVALLGAGGRTPDGGKANYEMTIWRSGVFRSFPHVRLSRKAVHEPLDYLRT HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHH FRNRIAHHEPIFDRHLAADYDSLLRVVGWINPKTRDWIEHHSRVPTLLAQSADDPGLTF HHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GDQEFVVKSAFSYSDAVIDALETSLSPERMETYAKRSGNDREKAVRLYTWNTAISAAFY CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHEEEEEEEHHHHHHHHH GPLQGLEVALRNALHRELAEKYGTNWYDNPAAGLDDGTLKRLSRARSELRRGRYADDPSH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH MVAALSFGFWVALLGAGGRTPDGGKANYEMTIWRSGVFRSFPHVRLSRKAVHEPLDYLRT HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHH FRNRIAHHEPIFDRHLAADYDSLLRVVGWINPKTRDWIEHHSRVPTLLAQSADDPGLTF HHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA