| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is guaB [H]
Identifier: 83593293
GI number: 83593293
Start: 2266376
End: 2267533
Strand: Direct
Name: guaB [H]
Synonym: Rru_A1958
Alternate gene names: 83593293
Gene position: 2266376-2267533 (Clockwise)
Preceding gene: 83593292
Following gene: 83593294
Centisome position: 52.07
GC content: 70.64
Gene sequence:
>1158_bases ATGATCGAGGGATTGCGCAGCGGCCTCAGCTTCGACGACGTGCTGCTGGTTCCCGGGCGGACCCGGGCGCGCAGCCGCGC CGATATCACCCTTGCCAGCCGCTTCTCCCGGCGCATCGCCTTGGCCTTGCCGCTGGTCTCGGCCAATGTGCCGTGGTGCA CGCAAGCGCCGATGGCGATCGCCCTGGGCCGCTTGGGCGGGCTGGGCGTTCTTCACCGCATGTGCGCCATCGAGGATCAG GAACGTCAGGTCGCCCTGGTCAAGGCGGCGCCCGTCGATGGCGAAGACGCGGCGCGGGCAACCGTCGATGACGGGGGCGC CCTAATCGCCGCCGCCGCCGTCGGCGCCAAGCCCGAGGATCTGGAGCGCGCCGACCGCTTGGTGGCGGCGGGCTGCGACG CCCTGGTCGTCGATATCGCCCATGGCCATGCCGATTACGCCCTCGATACCATCGCCGCGCTGAAAAGCCGCCATCCGCAA ATTGATGTCATCGGCGGCAATGTTGCCACCGCCGAGGGCACGGCCGATCTGATCGCCGCCGGGGCCGATGCCATCAAGGT CGGCATCGGTCCGGGCGGCATCTGCACCACCCGGCGGGTGGCCGGGGCCGGGGTGCCGCAGATGACGGCGATCGCCGATT GCGTCGGCGTCGCCCGCGCCCGGAACGTGCCGGTGATCGCCGATGGCGGCATCCGCTTCTCGGGCGATATCGTCAAGGCC CTGGCCGTCGGCGCCGCCTCGGTGATGCTGGGCAGCCTGCTGGCCGGAACCGATGAAAGCGCCGCCGTCTTCATCGACCA CCAGGGGCGGCGCTGCAAGGCGACCACCGGCTTCGTCACCCTCGGCGTCGGACTGACCCGCAAACGCCTGCGCGGCGAGA AGATCAACGCCGAGGATCTCGACGCCTATGTCGCCGAAGGGGTGGAATCGACCTTCGAGGCCTCGGGTCCGCTGGCCCGG CTGATCGGTCAGCTTGCCGGGGGGATACGCTCGGGCGTCAGCTATGGCGGCGCCCTGAGCATCGCCGAACTTCAGGACAA GGCCCGCTTCATCCGCGTCAGCGAAGCCGGGCGGGCGGAAAGCCGCCCCCATGCCCTGGACCGCGCCCCCGCCCCGCCCC CCGATTACGCGAGGCTGTTCGTCGAGGAGGAGGCCTGA
Upstream 100 bases:
>100_bases GTGATTCCTGCCTGCTGCGCTTGAAGGGCTTCGCCGAGAACGGCCTGGAGGATCCGGTGCGCTATGTCGGGGCGCGGTCA CGGGCGGCGGGGTGAGCGCG
Downstream 100 bases:
>100_bases GCATGTTCGGCCGGAACCCTGCGCGCGGCCCCGACCCCGGCGATGGTGAAAGCCTGTGGATCCAGGAAGTTTTCTACACC TTGCAGGGCGAAGGGCCGTT
Product: GMP reductase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MIEGLRSGLSFDDVLLVPGRTRARSRADITLASRFSRRIALALPLVSANVPWCTQAPMAIALGRLGGLGVLHRMCAIEDQ ERQVALVKAAPVDGEDAARATVDDGGALIAAAAVGAKPEDLERADRLVAAGCDALVVDIAHGHADYALDTIAALKSRHPQ IDVIGGNVATAEGTADLIAAGADAIKVGIGPGGICTTRRVAGAGVPQMTAIADCVGVARARNVPVIADGGIRFSGDIVKA LAVGAASVMLGSLLAGTDESAAVFIDHQGRRCKATTGFVTLGVGLTRKRLRGEKINAEDLDAYVAEGVESTFEASGPLAR LIGQLAGGIRSGVSYGGALSIAELQDKARFIRVSEAGRAESRPHALDRAPAPPPDYARLFVEEEA
Sequences:
>Translated_385_residues MIEGLRSGLSFDDVLLVPGRTRARSRADITLASRFSRRIALALPLVSANVPWCTQAPMAIALGRLGGLGVLHRMCAIEDQ ERQVALVKAAPVDGEDAARATVDDGGALIAAAAVGAKPEDLERADRLVAAGCDALVVDIAHGHADYALDTIAALKSRHPQ IDVIGGNVATAEGTADLIAAGADAIKVGIGPGGICTTRRVAGAGVPQMTAIADCVGVARARNVPVIADGGIRFSGDIVKA LAVGAASVMLGSLLAGTDESAAVFIDHQGRRCKATTGFVTLGVGLTRKRLRGEKINAEDLDAYVAEGVESTFEASGPLAR LIGQLAGGIRSGVSYGGALSIAELQDKARFIRVSEAGRAESRPHALDRAPAPPPDYARLFVEEEA >Mature_385_residues MIEGLRSGLSFDDVLLVPGRTRARSRADITLASRFSRRIALALPLVSANVPWCTQAPMAIALGRLGGLGVLHRMCAIEDQ ERQVALVKAAPVDGEDAARATVDDGGALIAAAAVGAKPEDLERADRLVAAGCDALVVDIAHGHADYALDTIAALKSRHPQ IDVIGGNVATAEGTADLIAAGADAIKVGIGPGGICTTRRVAGAGVPQMTAIADCVGVARARNVPVIADGGIRFSGDIVKA LAVGAASVMLGSLLAGTDESAAVFIDHQGRRCKATTGFVTLGVGLTRKRLRGEKINAEDLDAYVAEGVESTFEASGPLAR LIGQLAGGIRSGVSYGGALSIAELQDKARFIRVSEAGRAESRPHALDRAPAPPPDYARLFVEEEA
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPDH/GMPR family [H]
Homologues:
Organism=Homo sapiens, GI50541956, Length=353, Percent_Identity=31.1614730878187, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI50541954, Length=353, Percent_Identity=31.1614730878187, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI50541952, Length=353, Percent_Identity=31.1614730878187, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI50541948, Length=353, Percent_Identity=31.1614730878187, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI217035146, Length=300, Percent_Identity=33, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI217035152, Length=276, Percent_Identity=34.7826086956522, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI34328930, Length=300, Percent_Identity=33, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI217035148, Length=300, Percent_Identity=33, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI156616279, Length=276, Percent_Identity=34.7826086956522, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI34328928, Length=276, Percent_Identity=34.7826086956522, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI217035150, Length=300, Percent_Identity=33, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI156104880, Length=354, Percent_Identity=29.3785310734463, Blast_Score=155, Evalue=4e-38, Organism=Homo sapiens, GI66933016, Length=295, Percent_Identity=34.2372881355932, Blast_Score=154, Evalue=2e-37, Organism=Escherichia coli, GI1788855, Length=282, Percent_Identity=46.0992907801418, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI1786293, Length=353, Percent_Identity=28.328611898017, Blast_Score=153, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17560440, Length=370, Percent_Identity=30.8108108108108, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI71994385, Length=312, Percent_Identity=32.6923076923077, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71994389, Length=222, Percent_Identity=36.4864864864865, Blast_Score=133, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323464, Length=267, Percent_Identity=34.0823970037453, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6323585, Length=249, Percent_Identity=35.7429718875502, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322012, Length=268, Percent_Identity=33.5820895522388, Blast_Score=145, Evalue=9e-36, Organism=Saccharomyces cerevisiae, GI6319352, Length=125, Percent_Identity=40, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571163, Length=277, Percent_Identity=36.4620938628159, Blast_Score=161, Evalue=6e-40, Organism=Drosophila melanogaster, GI24641071, Length=277, Percent_Identity=36.4620938628159, Blast_Score=161, Evalue=7e-40, Organism=Drosophila melanogaster, GI24641073, Length=277, Percent_Identity=36.4620938628159, Blast_Score=161, Evalue=7e-40,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 39584; Mature: 39584
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEGLRSGLSFDDVLLVPGRTRARSRADITLASRFSRRIALALPLVSANVPWCTQAPMAI CCCCHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEHHCCCCCCCCCCCHHH ALGRLGGLGVLHRMCAIEDQERQVALVKAAPVDGEDAARATVDDGGALIAAAAVGAKPED HHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCHH LERADRLVAAGCDALVVDIAHGHADYALDTIAALKSRHPQIDVIGGNVATAEGTADLIAA HHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEECCCCHHHHHC GADAIKVGIGPGGICTTRRVAGAGVPQMTAIADCVGVARARNVPVIADGGIRFSGDIVKA CCCEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEECHHHHHH LAVGAASVMLGSLLAGTDESAAVFIDHQGRRCKATTGFVTLGVGLTRKRLRGEKINAEDL HHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCEEEECCCHHHHHHCCCCCCHHHH DAYVAEGVESTFEASGPLARLIGQLAGGIRSGVSYGGALSIAELQDKARFIRVSEAGRAE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCHHEEEEECCCCCC SRPHALDRAPAPPPDYARLFVEEEA CCCCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MIEGLRSGLSFDDVLLVPGRTRARSRADITLASRFSRRIALALPLVSANVPWCTQAPMAI CCCCHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEHHCCCCCCCCCCCHHH ALGRLGGLGVLHRMCAIEDQERQVALVKAAPVDGEDAARATVDDGGALIAAAAVGAKPED HHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCHH LERADRLVAAGCDALVVDIAHGHADYALDTIAALKSRHPQIDVIGGNVATAEGTADLIAA HHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEECCCCHHHHHC GADAIKVGIGPGGICTTRRVAGAGVPQMTAIADCVGVARARNVPVIADGGIRFSGDIVKA CCCEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEECHHHHHH LAVGAASVMLGSLLAGTDESAAVFIDHQGRRCKATTGFVTLGVGLTRKRLRGEKINAEDL HHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCEEEECCCHHHHHHCCCCCCHHHH DAYVAEGVESTFEASGPLARLIGQLAGGIRSGVSYGGALSIAELQDKARFIRVSEAGRAE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCHHEEEEECCCCCC SRPHALDRAPAPPPDYARLFVEEEA CCCCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961392; 9403685; 10758003 [H]