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The map label for this gene is nahD [H]

Identifier: 83593279

GI number: 83593279

Start: 2252990

End: 2253592

Strand: Reverse

Name: nahD [H]

Synonym: Rru_A1944

Alternate gene names: 83593279

Gene position: 2253592-2252990 (Counterclockwise)

Preceding gene: 83593280

Following gene: 83593278

Centisome position: 51.77

GC content: 65.17

Gene sequence:

>603_bases
ATGCCCGAGCCTTTGACCTTCTATTTCGACTTTTCCAGCCCCTATAGCTGGATCGCCGCCGAACGGATCGGCGATCTGGC
CGCCCGCTACGGCCGCGATGTCCGCTGGCGGGCGATTCTTCTCGGGCCGCTGTTCAAGGAAAGCGGCAACCGCCCCCTGA
TCAACCAGCCGATCAAAAGCGACTACTTCCGCCGCGATTTCGTCCGCTGCCTGCGCTTGCATGGCCTGGAAGGCGATCTA
CCGGCGAAATTCCCGGTGCCGACCGCCGCGGCGGCGCGGGGATTCCTGTGGTTGAGCGAGATCGGCGAGGCGGCGGCGAT
TGATTACGCCCTGGCGCTGTTTCGCGCCTATTTCCAGGATGAACGCGATATCTCCGACCGTCTGGTCGTCGCCGATATCG
CCGCCGAGCGTGGCCATGACCGGGGGGCGCTGTTGTCGGTGGTCGAGGATCCGGCGTGGAAGGGCCGTTTGGTCGAAGAA
GTGGAGGAGGCCCGGCGCGACGGGGTTTTCGGCGCCCCGTTCTTCCTGGTCGATGGCGAGCCGTTCTGGGGGGCCGACCG
CCTTGACATGGTCGATACCTGGCTGGCTAAGGGGGGCTGGTAA

Upstream 100 bases:

>100_bases
GTATCGCATCTATGATAAAGTGTGAAACGCCCGCCGCCTTTCCACCATAAGCCGGTGTTGCGGCCGGATAAGAAAAGCCA
ACAGGAGGGAGGAGACGCCA

Downstream 100 bases:

>100_bases
GGGAAACCGCGAACCGGCGCCGGCCTTTTTGGCGCGGCGGACCGATGACAGAGTGCCGCGAATCATCGCCAAGGAGCCCG
ATTAAAGGGCCGGTCAGGGG

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: HCCA isomerase [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MPEPLTFYFDFSSPYSWIAAERIGDLAARYGRDVRWRAILLGPLFKESGNRPLINQPIKSDYFRRDFVRCLRLHGLEGDL
PAKFPVPTAAAARGFLWLSEIGEAAAIDYALALFRAYFQDERDISDRLVVADIAAERGHDRGALLSVVEDPAWKGRLVEE
VEEARRDGVFGAPFFLVDGEPFWGADRLDMVDTWLAKGGW

Sequences:

>Translated_200_residues
MPEPLTFYFDFSSPYSWIAAERIGDLAARYGRDVRWRAILLGPLFKESGNRPLINQPIKSDYFRRDFVRCLRLHGLEGDL
PAKFPVPTAAAARGFLWLSEIGEAAAIDYALALFRAYFQDERDISDRLVVADIAAERGHDRGALLSVVEDPAWKGRLVEE
VEEARRDGVFGAPFFLVDGEPFWGADRLDMVDTWLAKGGW
>Mature_199_residues
PEPLTFYFDFSSPYSWIAAERIGDLAARYGRDVRWRAILLGPLFKESGNRPLINQPIKSDYFRRDFVRCLRLHGLEGDLP
AKFPVPTAAAARGFLWLSEIGEAAAIDYALALFRAYFQDERDISDRLVVADIAAERGHDRGALLSVVEDPAWKGRLVEEV
EEARRDGVFGAPFFLVDGEPFWGADRLDMVDTWLAKGGW

Specific function: Catalyzes the isomerization of 2-hydroxychromene-2- carboxylate (HCCA) to trans-O-hydroxybenzylidenepyruvate (THBPA). The reaction is reversible [H]

COG id: COG3917

COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR014440
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 22626; Mature: 22495

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPLTFYFDFSSPYSWIAAERIGDLAARYGRDVRWRAILLGPLFKESGNRPLINQPIKS
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCCCHHH
DYFRRDFVRCLRLHGLEGDLPAKFPVPTAAAARGFLWLSEIGEAAAIDYALALFRAYFQD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
ERDISDRLVVADIAAERGHDRGALLSVVEDPAWKGRLVEEVEEARRDGVFGAPFFLVDGE
CCCCCCCEEHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCC
PFWGADRLDMVDTWLAKGGW
CCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEPLTFYFDFSSPYSWIAAERIGDLAARYGRDVRWRAILLGPLFKESGNRPLINQPIKS
CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCCCHHH
DYFRRDFVRCLRLHGLEGDLPAKFPVPTAAAARGFLWLSEIGEAAAIDYALALFRAYFQD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
ERDISDRLVVADIAAERGHDRGALLSVVEDPAWKGRLVEEVEEARRDGVFGAPFFLVDGE
CCCCCCCEEHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCC
PFWGADRLDMVDTWLAKGGW
CCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002605; 1447127 [H]