| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593272
Identifier: 83593272
GI number: 83593272
Start: 2244769
End: 2245953
Strand: Reverse
Name: 83593272
Synonym: Rru_A1937
Alternate gene names: NA
Gene position: 2245953-2244769 (Counterclockwise)
Preceding gene: 83593275
Following gene: 83593271
Centisome position: 51.6
GC content: 69.37
Gene sequence:
>1185_bases ATGCCGGAGGGCGCTACCATGGCCCGGCCCGATGGCGGACACAAGGGGCCTGCTATGACCAACCCCGATCCAAGCCAGCC AATCCCCGTCCCCGGGGACGGCCGGGATCGCGATATCCGTCAGGCTTCCAAGATCGCGCCGCCCCAGCCGGCTCCCGCCT GCCGTGAGTCGCTGGCGCTCGCCGGGCGAGCTGATCGGGTTATCGCCCATCAGTCGCCGGTGTTCTTCGCCGCCCGTCAG GCCCATGGCGATCCGACCCGGGTGCCGCTTTTCCTGGTGGGGCCGGCGACGCCTTTGGCCAAGCGCGTTCAGGCGATCCT GACCGCCCATTCGCGCATTCACGGCGCCCCCCCCCTTGATCTTATCCCCGGGGTCGTCGAGACCCTGGAAGCCTGGGACC ACGATGCCGGGCGGGCGCGGGTCTTTCCCGAAAGCCTCGATGGCCTGTCGGCGACCGATTCGCTCAAGGTCGCGGGCTGG CTGCTGACCCGGATCCTCCAGGAAGATCCGATGGCCGACCATGTGCTGGACGGCCGCGGCCTGAATGCCGCCCTGGTCGG ACTGGTCCATCTGCTTTTTCCCAAGGCTCCCCTGATCTTTTGCCGCGACGCCCTGGACGAAGCCGGGGAGGGGGGGACGC TGGGCGCCGAGGCCGGCTTGCTGGCGCAAACCCAGAACCGCTTGATCGACCATTGGGCCACGGCCCTGCCCGGGCGGATC ATTGAAATCAGCCGCGAGGCCTTTTTGGCCGATGCCGGGGCGGTGACCCGCCTGCTGCTCGATCGTTTGGAGTTGCCGTT GGAAGACCGGGTGCTTCAGGCGATCACGGCGCCGCCCGGTGAACGGCTGTTCCTGACCCCGGGCGCCGGGGTCAGCGCCG CCGTCGTTCACATTCGCGCCGGTCGATTGGGCCGGGCCGAGGACGTGCTGCGCGGCGTGCTCAAGCGCGTGCCCGAACAT CCCGCCGCCGTGCATCTTTTGGGCGTGGTGATGCATCGGCGGGGCGATCGGCTGCTGGCGGCGCGCTTGATGCGCCAGTC GCTGGCCCTGGCCGGAACGCCGATGCGCGATTGGGAACACAATCTGGCCGTCGTCGAACGCGCCCTGGCGGCGACGCCGC CGCCTTCCGCTTCGCCGTTGGACGCGGCCGGAAAAGCCCCGGGGGAAGACGGAGAAGACCTTTAA
Upstream 100 bases:
>100_bases GTGGTACGCGTGATCGTAATTCATCGATAGCCCGATTGCGCGAGGGAGGAGCAAAATGGATTTCTCCGGTCGGAAGAAGC GGTTGCGCGTCTTGGCGTCG
Downstream 100 bases:
>100_bases AAATAAGGGGTAAACCGGTTTTTTCGGAGCTTGGCCGCAGGGTTGTTGCCGCATTGCATCATGGTGCCTAAAAATCACGA TTGGCCGGCTCCCGTCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MPEGATMARPDGGHKGPAMTNPDPSQPIPVPGDGRDRDIRQASKIAPPQPAPACRESLALAGRADRVIAHQSPVFFAARQ AHGDPTRVPLFLVGPATPLAKRVQAILTAHSRIHGAPPLDLIPGVVETLEAWDHDAGRARVFPESLDGLSATDSLKVAGW LLTRILQEDPMADHVLDGRGLNAALVGLVHLLFPKAPLIFCRDALDEAGEGGTLGAEAGLLAQTQNRLIDHWATALPGRI IEISREAFLADAGAVTRLLLDRLELPLEDRVLQAITAPPGERLFLTPGAGVSAAVVHIRAGRLGRAEDVLRGVLKRVPEH PAAVHLLGVVMHRRGDRLLAARLMRQSLALAGTPMRDWEHNLAVVERALAATPPPSASPLDAAGKAPGEDGEDL
Sequences:
>Translated_394_residues MPEGATMARPDGGHKGPAMTNPDPSQPIPVPGDGRDRDIRQASKIAPPQPAPACRESLALAGRADRVIAHQSPVFFAARQ AHGDPTRVPLFLVGPATPLAKRVQAILTAHSRIHGAPPLDLIPGVVETLEAWDHDAGRARVFPESLDGLSATDSLKVAGW LLTRILQEDPMADHVLDGRGLNAALVGLVHLLFPKAPLIFCRDALDEAGEGGTLGAEAGLLAQTQNRLIDHWATALPGRI IEISREAFLADAGAVTRLLLDRLELPLEDRVLQAITAPPGERLFLTPGAGVSAAVVHIRAGRLGRAEDVLRGVLKRVPEH PAAVHLLGVVMHRRGDRLLAARLMRQSLALAGTPMRDWEHNLAVVERALAATPPPSASPLDAAGKAPGEDGEDL >Mature_393_residues PEGATMARPDGGHKGPAMTNPDPSQPIPVPGDGRDRDIRQASKIAPPQPAPACRESLALAGRADRVIAHQSPVFFAARQA HGDPTRVPLFLVGPATPLAKRVQAILTAHSRIHGAPPLDLIPGVVETLEAWDHDAGRARVFPESLDGLSATDSLKVAGWL LTRILQEDPMADHVLDGRGLNAALVGLVHLLFPKAPLIFCRDALDEAGEGGTLGAEAGLLAQTQNRLIDHWATALPGRII EISREAFLADAGAVTRLLLDRLELPLEDRVLQAITAPPGERLFLTPGAGVSAAVVHIRAGRLGRAEDVLRGVLKRVPEHP AAVHLLGVVMHRRGDRLLAARLMRQSLALAGTPMRDWEHNLAVVERALAATPPPSASPLDAAGKAPGEDGEDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 41725; Mature: 41594
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEGATMARPDGGHKGPAMTNPDPSQPIPVPGDGRDRDIRQASKIAPPQPAPACRESLAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH AGRADRVIAHQSPVFFAARQAHGDPTRVPLFLVGPATPLAKRVQAILTAHSRIHGAPPLD CCCCCHHHHCCCCHHEEHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHH LIPGVVETLEAWDHDAGRARVFPESLDGLSATDSLKVAGWLLTRILQEDPMADHVLDGRG HHHHHHHHHHHHCCCCCCEEECHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCC LNAALVGLVHLLFPKAPLIFCRDALDEAGEGGTLGAEAGLLAQTQNRLIDHWATALPGRI CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE IEISREAFLADAGAVTRLLLDRLELPLEDRVLQAITAPPGERLFLTPGAGVSAAVVHIRA EEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCHHEEEEEEC GRLGRAEDVLRGVLKRVPEHPAAVHLLGVVMHRRGDRLLAARLMRQSLALAGTPMRDWEH CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH NLAVVERALAATPPPSASPLDAAGKAPGEDGEDL HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PEGATMARPDGGHKGPAMTNPDPSQPIPVPGDGRDRDIRQASKIAPPQPAPACRESLAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH AGRADRVIAHQSPVFFAARQAHGDPTRVPLFLVGPATPLAKRVQAILTAHSRIHGAPPLD CCCCCHHHHCCCCHHEEHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHH LIPGVVETLEAWDHDAGRARVFPESLDGLSATDSLKVAGWLLTRILQEDPMADHVLDGRG HHHHHHHHHHHHCCCCCCEEECHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCC LNAALVGLVHLLFPKAPLIFCRDALDEAGEGGTLGAEAGLLAQTQNRLIDHWATALPGRI CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE IEISREAFLADAGAVTRLLLDRLELPLEDRVLQAITAPPGERLFLTPGAGVSAAVVHIRA EEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCHHEEEEEEC GRLGRAEDVLRGVLKRVPEHPAAVHLLGVVMHRRGDRLLAARLMRQSLALAGTPMRDWEH CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH NLAVVERALAATPPPSASPLDAAGKAPGEDGEDL HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]