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The map label for this gene is ahyR [H]

Identifier: 83593270

GI number: 83593270

Start: 2241652

End: 2242416

Strand: Reverse

Name: ahyR [H]

Synonym: Rru_A1935

Alternate gene names: 83593270

Gene position: 2242416-2241652 (Counterclockwise)

Preceding gene: 83593271

Following gene: 83593268

Centisome position: 51.52

GC content: 66.67

Gene sequence:

>765_bases
ATGCGTCGGGAGTTCGAGGCGGCGGGCGTGCCCCATGTGTCCTATGGCGCCTTGTTCTCCCCCCATTATCGCAGCGATCC
GGGCCGCGAGACGGTCTATATGTCCCATTTCGATCAAGCCTTCCTGGATCGCTACAGTCAGGCCGGACACCTTAGCCACG
ATACCGCCGTTCAATGGGTTTTCCGCTTTTCGCAACCGGTTCCCTGGGTTACGCCGCGTCGGCTCGCCGAGCTTTCGGAA
CGCCAGATCCGGGTTTGGGAGGAGGGGGAGGCCTTTGGCGTGCGCAACGGCCTGAGCGTCCCCGTGCGCTTTGGTCGCGA
TGGCAGCGCCGGTGGCCTGTTCTTCAGCGCCACCGGGCTTGGCGATGACGACTGGAGGGGCATTCTGACCGACAAGGGCG
CCACCCTGGTCGCCCTCGCCTATACCTTTCATGAGGCCATGGAGCGGTTCCCGCTGTTTTCGACCCGGGTCAATCCGCAA
GACCACGTCATCCATCTGACCAACCGCGAGCGCGAGAGCCTGATCTGGTCGGCGCGCGGCTGTCAGGTGGGCGAGGTCGC
CGATCGGCTGGGCGTGGCCGATCGAACGGCCGAACACCATCTGGGGGCGGCGCGGCGCAAGCTTATGGCGCGCACCACCG
CCCAGGCGGTGGCCCGCGCCCTGGCCATGGGCCTGCTGTTTGACGGGGTGGCGCCGCTGCGCCGCGCTCCGGGAGACCTG
CCCTTTCCCGATCCCGGGGCCGATCTACAGAGCGTCTCGATCTGA

Upstream 100 bases:

>100_bases
GGGGACAAGTGTGAACAAGGACTGCAGCCTCACCGTTGCCCAATGCGGCTTTCAAACCAGGCTTGCCGCCTGTGACACGC
CCCGGTCGTGTTGGAGTCTG

Downstream 100 bases:

>100_bases
TCGACGGGGTGAAGGGTTTTGTCGATCAGATCGACAGGGTTGAAGGGTTTTGTCGATCAGATCGACAGGGTTGAAGGGTT
TTGTCGATCAGATCGACAGG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MRREFEAAGVPHVSYGALFSPHYRSDPGRETVYMSHFDQAFLDRYSQAGHLSHDTAVQWVFRFSQPVPWVTPRRLAELSE
RQIRVWEEGEAFGVRNGLSVPVRFGRDGSAGGLFFSATGLGDDDWRGILTDKGATLVALAYTFHEAMERFPLFSTRVNPQ
DHVIHLTNRERESLIWSARGCQVGEVADRLGVADRTAEHHLGAARRKLMARTTAQAVARALAMGLLFDGVAPLRRAPGDL
PFPDPGADLQSVSI

Sequences:

>Translated_254_residues
MRREFEAAGVPHVSYGALFSPHYRSDPGRETVYMSHFDQAFLDRYSQAGHLSHDTAVQWVFRFSQPVPWVTPRRLAELSE
RQIRVWEEGEAFGVRNGLSVPVRFGRDGSAGGLFFSATGLGDDDWRGILTDKGATLVALAYTFHEAMERFPLFSTRVNPQ
DHVIHLTNRERESLIWSARGCQVGEVADRLGVADRTAEHHLGAARRKLMARTTAQAVARALAMGLLFDGVAPLRRAPGDL
PFPDPGADLQSVSI
>Mature_254_residues
MRREFEAAGVPHVSYGALFSPHYRSDPGRETVYMSHFDQAFLDRYSQAGHLSHDTAVQWVFRFSQPVPWVTPRRLAELSE
RQIRVWEEGEAFGVRNGLSVPVRFGRDGSAGGLFFSATGLGDDDWRGILTDKGATLVALAYTFHEAMERFPLFSTRVNPQ
DHVIHLTNRERESLIWSARGCQVGEVADRLGVADRTAEHHLGAARRKLMARTTAQAVARALAMGLLFDGVAPLRRAPGDL
PFPDPGADLQSVSI

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 28212; Mature: 28212

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRREFEAAGVPHVSYGALFSPHYRSDPGRETVYMSHFDQAFLDRYSQAGHLSHDTAVQWV
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHH
FRFSQPVPWVTPRRLAELSERQIRVWEEGEAFGVRNGLSVPVRFGRDGSAGGLFFSATGL
HHHCCCCCCCCHHHHHHHHHHHEEEEECCCEEECCCCCCCCEEECCCCCCCCEEEEECCC
GDDDWRGILTDKGATLVALAYTFHEAMERFPLFSTRVNPQDHVIHLTNRERESLIWSARG
CCCCCCEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHEECCCC
CQVGEVADRLGVADRTAEHHLGAARRKLMARTTAQAVARALAMGLLFDGVAPLRRAPGDL
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
PFPDPGADLQSVSI
CCCCCCCCCCCCCC
>Mature Secondary Structure
MRREFEAAGVPHVSYGALFSPHYRSDPGRETVYMSHFDQAFLDRYSQAGHLSHDTAVQWV
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHH
FRFSQPVPWVTPRRLAELSERQIRVWEEGEAFGVRNGLSVPVRFGRDGSAGGLFFSATGL
HHHCCCCCCCCHHHHHHHHHHHEEEEECCCEEECCCCCCCCEEECCCCCCCCEEEEECCC
GDDDWRGILTDKGATLVALAYTFHEAMERFPLFSTRVNPQDHVIHLTNRERESLIWSARG
CCCCCCEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHEECCCC
CQVGEVADRLGVADRTAEHHLGAARRKLMARTTAQAVARALAMGLLFDGVAPLRRAPGDL
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
PFPDPGADLQSVSI
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]