| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593265
Identifier: 83593265
GI number: 83593265
Start: 2236276
End: 2236812
Strand: Reverse
Name: 83593265
Synonym: Rru_A1930
Alternate gene names: NA
Gene position: 2236812-2236276 (Counterclockwise)
Preceding gene: 83593266
Following gene: 83593264
Centisome position: 51.39
GC content: 70.39
Gene sequence:
>537_bases ATGGCTCCGTTGCGGCTTGATCGCCCGGTTCGTCCGGCCTCGGACCTTGTCGTGCTCGACGCCCTGGCGGCGCTTCCCGA CGATGGCAAGGCGCTGGTTCCCTTGTCGCGCTGGAAAGGCGAGCGCGCGGAGCTGATCGCCAATGGCTTCGCCGGCGGCG TCTGGCTCGAGTCGGGCGAGGGGCCGGAAGACTGGGGGCCGACCCTGGTGGCGGATCTCGCCGTCCTGCCGGTGATCGGC CTGCGCTTTCCCCGTTTCACCGATGGCCGCGGCTATTCGGTGGCCCGCCTGCTGCGCGATCGCTTCGGCTATCGCCACGA GCTGCGCGCCCTGGGCGGGATCGGTCTTGATCAGGTGACCTTGCTGGCCCGCTGCGGGATCGATGCCGTCGAGTCCGAGG TGCCGCTCGCCCCGCTGGCGGTCAGCGCCGTGCTCGATCGCCTTCGTCATGTCTATCAGCACGCTTCCGACGGTCGCTCG GCCCTATGGGCGGCCCGCGCGGCGGCATCGGCGCAAGCCGAGGATGGCTTGGCATGA
Upstream 100 bases:
>100_bases GAAACCGTGGTCGATACCTACATCGGCCTGCGCCAGGACGGCGAGACCTTCATCGAGACCTTCCGCCGGGTTGGCGTGAC CCCCTTCAAGGAGGCCCTTT
Downstream 100 bases:
>100_bases CCGCCGAAGTCGATGTCTCGCCGGCGATCGAGGATCTGCTCGGCCGTCATGGCGACAGCGCCGCCGAGGCGATCTTGGAG GATGTTCTGAAGCGGGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAPLRLDRPVRPASDLVVLDALAALPDDGKALVPLSRWKGERAELIANGFAGGVWLESGEGPEDWGPTLVADLAVLPVIG LRFPRFTDGRGYSVARLLRDRFGYRHELRALGGIGLDQVTLLARCGIDAVESEVPLAPLAVSAVLDRLRHVYQHASDGRS ALWAARAAASAQAEDGLA
Sequences:
>Translated_178_residues MAPLRLDRPVRPASDLVVLDALAALPDDGKALVPLSRWKGERAELIANGFAGGVWLESGEGPEDWGPTLVADLAVLPVIG LRFPRFTDGRGYSVARLLRDRFGYRHELRALGGIGLDQVTLLARCGIDAVESEVPLAPLAVSAVLDRLRHVYQHASDGRS ALWAARAAASAQAEDGLA >Mature_177_residues APLRLDRPVRPASDLVVLDALAALPDDGKALVPLSRWKGERAELIANGFAGGVWLESGEGPEDWGPTLVADLAVLPVIGL RFPRFTDGRGYSVARLLRDRFGYRHELRALGGIGLDQVTLLARCGIDAVESEVPLAPLAVSAVLDRLRHVYQHASDGRSA LWAARAAASAQAEDGLA
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18994; Mature: 18863
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLRLDRPVRPASDLVVLDALAALPDDGKALVPLSRWKGERAELIANGFAGGVWLESGE CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHCCCCCCEEEECCC GPEDWGPTLVADLAVLPVIGLRFPRFTDGRGYSVARLLRDRFGYRHELRALGGIGLDQVT CCCHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCHHHHH LLARCGIDAVESEVPLAPLAVSAVLDRLRHVYQHASDGRSALWAARAAASAQAEDGLA HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure APLRLDRPVRPASDLVVLDALAALPDDGKALVPLSRWKGERAELIANGFAGGVWLESGE CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHCCCCCCEEEECCC GPEDWGPTLVADLAVLPVIGLRFPRFTDGRGYSVARLLRDRFGYRHELRALGGIGLDQVT CCCHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCHHHHH LLARCGIDAVESEVPLAPLAVSAVLDRLRHVYQHASDGRSALWAARAAASAQAEDGLA HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA