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The map label for this gene is mcp4 [H]

Identifier: 83593236

GI number: 83593236

Start: 2202238

End: 2204298

Strand: Reverse

Name: mcp4 [H]

Synonym: Rru_A1901

Alternate gene names: 83593236

Gene position: 2204298-2202238 (Counterclockwise)

Preceding gene: 83593237

Following gene: 83593234

Centisome position: 50.64

GC content: 66.04

Gene sequence:

>2061_bases
ATGGGTGTGGTTAACAAGGCAAGCAAGGTCCGGCGAAAGCCCTTCGGGCGGCTTGTGACACTTGTACGGGACATGTCGAT
CAGCCGAAAGATCGGCCTTGGTTTCGGGGTCATCGTTATTCTTTTGATGGTGCTTGGCGCCGGGGGAACCTGGGGGCTTT
TTGACGCTAAGACCAAGGTTGTGCAAATCCAGGCGATCAATCAGGCCCAAACGCAGGTGGCCGAGGCCTATACCACCTTG
CTCAAGGTCGATGCGGCGCTTGCCGACTTCCTGATCTCCAACGAAGCCACCGCCGCCGATTCCGCCGTTGGCGCCCTGGG
CGGCGCCTTGAACGCCCTGAACGAAGCCGGCGCCATTCTGACGGGCGAGGATAAGGAGCGGATCGCCGAGCTGATCGCTC
AGATCGATACCCTCTCAACCCGCATCCGCCGCGTTATCGACCTGCAAAGCGCCGCCGAAGTGGCCTTTTCCAGTGTCTCC
AATCAGGGACTGTCCCTCGAGCAGCGAATTTCCACCTTGTCGAGCGACGCCTTCGGCACCGGGTCGCTCAACGCCATCTT
CAAGGCCGAGGAAGCCCTGGTGAAGCTGGTCGCGGCGCGCACCGCCGCCCAGGCGTTTTTCGTTCGCCCCAAGGCCGTCC
CCTTCGATCCCATCATCAAGGACCTTGATGCCGCCGCCGCCCATGTGACCAGCCTCAAGCGCAGCATGGACGATCCGACC
GTTCTAGAACGGATCACCGAGGCCGAGGCCCTTTTCGTCACCTTTCGCGCCGACCTGTTGAGCGCCCGCGAAGCCGTCAC
GGCCCGGGTGAGCGCCATCGAAAAGGACCTGGTCCCGGTTCAACGCAAGGTTGTTCAGGGGATGCGCAAGGTTGAGCGCA
CCACCGAAAAGCTTCAAGCCGAGATGTCGGCCGATATCGACCAGGGTCTGCAGCGCAACATCGTGTTGTCGGTCGCCGTC
TCCGGCGGGGTGATCTTGTTCGCCATCGTCCTGTCGCTGGGCCTGGGGCGCTCGATTGGCCGGCCGATCGGTCGGCTGAT
CGCCAGTCTCGAGCGCCTGGAGCGCCGCGATCTCGACGCGCCGGTGACCGATACCGACCGCCGCGACGAGGTTGGCCGGC
TGGCCGGCGCCCTGGAAAGCTTCCGGGGCAATATGCGCATCGCCGACGCCCTTGAGCGCGACAAGGAAGAACAGGCCCGC
CAGCTGGCCATTCATGCCAGCCGCCTGGAGGATCTCAATCGCGGCTTCGAAGGCGACTCGCGGGCCCTGCTCGACGAGAC
CCTGGCCCAGGTCGCCCGGTTGCGCGCCATCGCCGATGATATGGCGACCCTGTCCCATCAGACCGACGCCGGGGCCGGCG
ACGCCTCGGAAGCGGCCGAACAGGCCAGCCGCGATACGGATTCGGTGGCGACCGCCGCCGAGGAACTGGCCGCCTCGGTG
CTCGAGATCAGCCGTCAGGTCCAGCATTCCTCGGACGTGGCGACCTCGGCCTCGCAGATGGCCCAAGGCGCGGTCAGCAC
CGTTGACGGTCTGTTGCTCGACGCCAATCGCATCGGCGAGGTGGTCGAACTGATCACCGCCATCGCCAGCCAGACCAATC
TTCTGGCGCTCAACGCCACGATCGAAGCCGCAAGGGCTGGCGATGCCGGCAAGGGCTTCGCCGTCGTCGCCGGCGAGGTC
AAGACCCTGGCCAATCAGACCAGCAAGGCGACCGAGGAAATCGGCTTGCGGGTCACCGCCGTCCAGGCCAAGACCGGCGA
GACGGTGGCCGCCATCGCCGCCATCGCCGACGCCATCGCCGATGTCATGCAGACCGCCGCGGCGATCGCCGCCGCCGTCG
AGGAGCAGGGCTCGGCGACCCACGAGATCGCCCGCAATATCCAGGCGGTTTCCGGGGGAGCGCAAACGGCGGCGAGCAGC
GCCCAAGCGGTGCGCTCGGTCGCCGCCACCGCCCAGGAAAAGGCCGGCGGCGTGGTCGAAGCCGTCGGCAGGCTCGCCCA
GCAATCACAGACCCTGGGCGACACCATCGGCCGCTTTCTTGACGAGGTGCGCACCGCCTGA

Upstream 100 bases:

>100_bases
AAGCGCGGGAGAATGCTCTAATCGGCAAGACAAGAAAAGGCGAGGGGGGGAGGAACGGCCTTCCAATCGTCTGCAATCGG
AATTTGGCGCGAGGGTAATG

Downstream 100 bases:

>100_bases
GCCGGGATGGTTTAGGGGGATTCTGAGCGGTCTTTCACGCGGAAACCGTGATCTTAGGGGTCGGCGGGCTCGTCGACCCC
GATCGCCGTTTCCGATTTAT

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 685

Protein sequence:

>686_residues
MGVVNKASKVRRKPFGRLVTLVRDMSISRKIGLGFGVIVILLMVLGAGGTWGLFDAKTKVVQIQAINQAQTQVAEAYTTL
LKVDAALADFLISNEATAADSAVGALGGALNALNEAGAILTGEDKERIAELIAQIDTLSTRIRRVIDLQSAAEVAFSSVS
NQGLSLEQRISTLSSDAFGTGSLNAIFKAEEALVKLVAARTAAQAFFVRPKAVPFDPIIKDLDAAAAHVTSLKRSMDDPT
VLERITEAEALFVTFRADLLSAREAVTARVSAIEKDLVPVQRKVVQGMRKVERTTEKLQAEMSADIDQGLQRNIVLSVAV
SGGVILFAIVLSLGLGRSIGRPIGRLIASLERLERRDLDAPVTDTDRRDEVGRLAGALESFRGNMRIADALERDKEEQAR
QLAIHASRLEDLNRGFEGDSRALLDETLAQVARLRAIADDMATLSHQTDAGAGDASEAAEQASRDTDSVATAAEELAASV
LEISRQVQHSSDVATSASQMAQGAVSTVDGLLLDANRIGEVVELITAIASQTNLLALNATIEAARAGDAGKGFAVVAGEV
KTLANQTSKATEEIGLRVTAVQAKTGETVAAIAAIADAIADVMQTAAAIAAAVEEQGSATHEIARNIQAVSGGAQTAASS
AQAVRSVAATAQEKAGGVVEAVGRLAQQSQTLGDTIGRFLDEVRTA

Sequences:

>Translated_686_residues
MGVVNKASKVRRKPFGRLVTLVRDMSISRKIGLGFGVIVILLMVLGAGGTWGLFDAKTKVVQIQAINQAQTQVAEAYTTL
LKVDAALADFLISNEATAADSAVGALGGALNALNEAGAILTGEDKERIAELIAQIDTLSTRIRRVIDLQSAAEVAFSSVS
NQGLSLEQRISTLSSDAFGTGSLNAIFKAEEALVKLVAARTAAQAFFVRPKAVPFDPIIKDLDAAAAHVTSLKRSMDDPT
VLERITEAEALFVTFRADLLSAREAVTARVSAIEKDLVPVQRKVVQGMRKVERTTEKLQAEMSADIDQGLQRNIVLSVAV
SGGVILFAIVLSLGLGRSIGRPIGRLIASLERLERRDLDAPVTDTDRRDEVGRLAGALESFRGNMRIADALERDKEEQAR
QLAIHASRLEDLNRGFEGDSRALLDETLAQVARLRAIADDMATLSHQTDAGAGDASEAAEQASRDTDSVATAAEELAASV
LEISRQVQHSSDVATSASQMAQGAVSTVDGLLLDANRIGEVVELITAIASQTNLLALNATIEAARAGDAGKGFAVVAGEV
KTLANQTSKATEEIGLRVTAVQAKTGETVAAIAAIADAIADVMQTAAAIAAAVEEQGSATHEIARNIQAVSGGAQTAASS
AQAVRSVAATAQEKAGGVVEAVGRLAQQSQTLGDTIGRFLDEVRTA
>Mature_685_residues
GVVNKASKVRRKPFGRLVTLVRDMSISRKIGLGFGVIVILLMVLGAGGTWGLFDAKTKVVQIQAINQAQTQVAEAYTTLL
KVDAALADFLISNEATAADSAVGALGGALNALNEAGAILTGEDKERIAELIAQIDTLSTRIRRVIDLQSAAEVAFSSVSN
QGLSLEQRISTLSSDAFGTGSLNAIFKAEEALVKLVAARTAAQAFFVRPKAVPFDPIIKDLDAAAAHVTSLKRSMDDPTV
LERITEAEALFVTFRADLLSAREAVTARVSAIEKDLVPVQRKVVQGMRKVERTTEKLQAEMSADIDQGLQRNIVLSVAVS
GGVILFAIVLSLGLGRSIGRPIGRLIASLERLERRDLDAPVTDTDRRDEVGRLAGALESFRGNMRIADALERDKEEQARQ
LAIHASRLEDLNRGFEGDSRALLDETLAQVARLRAIADDMATLSHQTDAGAGDASEAAEQASRDTDSVATAAEELAASVL
EISRQVQHSSDVATSASQMAQGAVSTVDGLLLDANRIGEVVELITAIASQTNLLALNATIEAARAGDAGKGFAVVAGEVK
TLANQTSKATEEIGLRVTAVQAKTGETVAAIAAIADAIADVMQTAAAIAAAVEEQGSATHEIARNIQAVSGGAQTAASSA
QAVRSVAATAQEKAGGVVEAVGRLAQQSQTLGDTIGRFLDEVRTA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=258, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI2367378, Length=353, Percent_Identity=26.9121813031161, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1788195, Length=242, Percent_Identity=33.0578512396694, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1788194, Length=221, Percent_Identity=35.2941176470588, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1789453, Length=257, Percent_Identity=30.3501945525292, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 71834; Mature: 71703

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVNKASKVRRKPFGRLVTLVRDMSISRKIGLGFGVIVILLMVLGAGGTWGLFDAKTKV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCE
VQIQAINQAQTQVAEAYTTLLKVDAALADFLISNEATAADSAVGALGGALNALNEAGAIL
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEE
TGEDKERIAELIAQIDTLSTRIRRVIDLQSAAEVAFSSVSNQGLSLEQRISTLSSDAFGT
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
GSLNAIFKAEEALVKLVAARTAAQAFFVRPKAVPFDPIIKDLDAAAAHVTSLKRSMDDPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
VLERITEAEALFVTFRADLLSAREAVTARVSAIEKDLVPVQRKVVQGMRKVERTTEKLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMSADIDQGLQRNIVLSVAVSGGVILFAIVLSLGLGRSIGRPIGRLIASLERLERRDLDA
HHHHHHHHCHHHCEEEEEECCCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCCCC
PVTDTDRRDEVGRLAGALESFRGNMRIADALERDKEEQARQLAIHASRLEDLNRGFEGDS
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RALLDETLAQVARLRAIADDMATLSHQTDAGAGDASEAAEQASRDTDSVATAAEELAASV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
LEISRQVQHSSDVATSASQMAQGAVSTVDGLLLDANRIGEVVELITAIASQTNLLALNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEECH
IEAARAGDAGKGFAVVAGEVKTLANQTSKATEEIGLRVTAVQAKTGETVAAIAAIADAIA
HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHH
DVMQTAAAIAAAVEEQGSATHEIARNIQAVSGGAQTAASSAQAVRSVAATAQEKAGGVVE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
AVGRLAQQSQTLGDTIGRFLDEVRTA
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVVNKASKVRRKPFGRLVTLVRDMSISRKIGLGFGVIVILLMVLGAGGTWGLFDAKTKV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCE
VQIQAINQAQTQVAEAYTTLLKVDAALADFLISNEATAADSAVGALGGALNALNEAGAIL
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEE
TGEDKERIAELIAQIDTLSTRIRRVIDLQSAAEVAFSSVSNQGLSLEQRISTLSSDAFGT
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
GSLNAIFKAEEALVKLVAARTAAQAFFVRPKAVPFDPIIKDLDAAAAHVTSLKRSMDDPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
VLERITEAEALFVTFRADLLSAREAVTARVSAIEKDLVPVQRKVVQGMRKVERTTEKLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMSADIDQGLQRNIVLSVAVSGGVILFAIVLSLGLGRSIGRPIGRLIASLERLERRDLDA
HHHHHHHHCHHHCEEEEEECCCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHCCCC
PVTDTDRRDEVGRLAGALESFRGNMRIADALERDKEEQARQLAIHASRLEDLNRGFEGDS
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RALLDETLAQVARLRAIADDMATLSHQTDAGAGDASEAAEQASRDTDSVATAAEELAASV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
LEISRQVQHSSDVATSASQMAQGAVSTVDGLLLDANRIGEVVELITAIASQTNLLALNAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEECH
IEAARAGDAGKGFAVVAGEVKTLANQTSKATEEIGLRVTAVQAKTGETVAAIAAIADAIA
HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHH
DVMQTAAAIAAAVEEQGSATHEIARNIQAVSGGAQTAASSAQAVRSVAATAQEKAGGVVE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
AVGRLAQQSQTLGDTIGRFLDEVRTA
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]