Click here to switch to the map view.

The map label for this gene is tcsA [H]

Identifier: 83593237

GI number: 83593237

Start: 2204594

End: 2205673

Strand: Reverse

Name: tcsA [H]

Synonym: Rru_A1902

Alternate gene names: 83593237

Gene position: 2205673-2204594 (Counterclockwise)

Preceding gene: 83593238

Following gene: 83593236

Centisome position: 50.67

GC content: 64.35

Gene sequence:

>1080_bases
GTGAGGACTTCGATCATCCGCATGCTCGTGGGGGCGGCGCTCGCCGCTGGTCTGGCGACCGGCGGCGCCCAGGCCGACGA
GCCCACCAAGGTCGGTTTCATCTATGTCGGTCCGGTCGGCGACTTCGGGTGGTCGCACCAGCACGACCAGGGCCGTCAGG
CCCTTGAGAAGGCCTTCGGCGACAAGGTGAAGACCTCCTTCGTCGAAAGCGTTCAGGAAGGCGCCGATGCCGAGCGCGTG
GTCCGCCAGTTCGCCGCCGGCGGCTATGATCTTGTTTTCACCACGTCGTTCGGCTTCATGAATCCGACGCTGAAGGTCGC
CCAGCAGTTTCCCAAGGTGAAGTTCGAGCATGCCACCGGCTACAAGCGCTCGGCCAATGTCGCCACCTATGCCGCCCGCT
TCTATGAGGGGCGTTATGTCATCGGCGTCATCGCCGGTCTGACCACCAAATCGAAGGTGGTCGGCTATGTCGCCTCCTTC
CCGATTCCCGAGGTGGTTTCGGGCATCAACGCCTTCGCCCGCGGCCTGCACAGCGTCAACCCCGAAGCCCAGGTCAAGGT
CATCTGGGTCAACTCGTGGTACGATCCCGGCAAGGAGCGCGAGGCCGCCGAGACCCTGATCGCCCAGGGCGCCGACGTTC
TGAGCCAGCATACCGACAGCCCGGCCCCGGTGCAGGTCGCCGAGGAAAAGGGCATCTTCGCCTTCGGTCAGGCCTCGGAC
ATGAGCCGCTTCGGGCCCCATGCCCAATTGACCGCCATCGTCGACAACTGGAACGAATATTACATCGACCGGGTCAAGGC
GGTGATGGACGGCACCTGGAAAGCCGAGGACACCTGGGGCGGTCTCGCCGCCGGCATGGTGCATCTCGCCCCCTATAACG
CCGCCCTGCCCGCCGATGTGGTCGAAAAGGCCGAAGCCGTTCGCAAGGCGATCGTCGACGGCAGCCTGCATCCCTTCGCC
GGCCCTTTGAAAAATCAGGCCGGTCAGGAGATCGTGCCCGCCGGTCAGGTTCTGGCCGACGACAAGATCCTGTCGATGGA
CTGGTACATCGAGGGCGTGCAGGGCCAGCTGCCGAAATAA

Upstream 100 bases:

>100_bases
TTGAACGCGCCGGCCTGCATCGGCAAGGTATTCCATCCGGAAAGCTGAGCGGCCGGCCCCGCGGGGGCGGCCACCACAGA
TCGTAAAAGGGGACATCATC

Downstream 100 bases:

>100_bases
GCCAAAGCGCCTGAGTCGGCGCCGAAAAGCCCGGATAAAGAGCGCGGGCTTTCGCAAGGCGGGAAAATTCTTCGAGTGAT
ACGGATCGGCGGTTCCTGAC

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MRTSIIRMLVGAALAAGLATGGAQADEPTKVGFIYVGPVGDFGWSHQHDQGRQALEKAFGDKVKTSFVESVQEGADAERV
VRQFAAGGYDLVFTTSFGFMNPTLKVAQQFPKVKFEHATGYKRSANVATYAARFYEGRYVIGVIAGLTTKSKVVGYVASF
PIPEVVSGINAFARGLHSVNPEAQVKVIWVNSWYDPGKEREAAETLIAQGADVLSQHTDSPAPVQVAEEKGIFAFGQASD
MSRFGPHAQLTAIVDNWNEYYIDRVKAVMDGTWKAEDTWGGLAAGMVHLAPYNAALPADVVEKAEAVRKAIVDGSLHPFA
GPLKNQAGQEIVPAGQVLADDKILSMDWYIEGVQGQLPK

Sequences:

>Translated_359_residues
MRTSIIRMLVGAALAAGLATGGAQADEPTKVGFIYVGPVGDFGWSHQHDQGRQALEKAFGDKVKTSFVESVQEGADAERV
VRQFAAGGYDLVFTTSFGFMNPTLKVAQQFPKVKFEHATGYKRSANVATYAARFYEGRYVIGVIAGLTTKSKVVGYVASF
PIPEVVSGINAFARGLHSVNPEAQVKVIWVNSWYDPGKEREAAETLIAQGADVLSQHTDSPAPVQVAEEKGIFAFGQASD
MSRFGPHAQLTAIVDNWNEYYIDRVKAVMDGTWKAEDTWGGLAAGMVHLAPYNAALPADVVEKAEAVRKAIVDGSLHPFA
GPLKNQAGQEIVPAGQVLADDKILSMDWYIEGVQGQLPK
>Mature_359_residues
MRTSIIRMLVGAALAAGLATGGAQADEPTKVGFIYVGPVGDFGWSHQHDQGRQALEKAFGDKVKTSFVESVQEGADAERV
VRQFAAGGYDLVFTTSFGFMNPTLKVAQQFPKVKFEHATGYKRSANVATYAARFYEGRYVIGVIAGLTTKSKVVGYVASF
PIPEVVSGINAFARGLHSVNPEAQVKVIWVNSWYDPGKEREAAETLIAQGADVLSQHTDSPAPVQVAEEKGIFAFGQASD
MSRFGPHAQLTAIVDNWNEYYIDRVKAVMDGTWKAEDTWGGLAAGMVHLAPYNAALPADVVEKAEAVRKAIVDGSLHPFA
GPLKNQAGQEIVPAGQVLADDKILSMDWYIEGVQGQLPK

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38635; Mature: 38635

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSIIRMLVGAALAAGLATGGAQADEPTKVGFIYVGPVGDFGWSHQHDQGRQALEKAFG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHC
DKVKTSFVESVQEGADAERVVRQFAAGGYDLVFTTSFGFMNPTLKVAQQFPKVKFEHATG
HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCEEECCCC
YKRSANVATYAARFYEGRYVIGVIAGLTTKSKVVGYVASFPIPEVVSGINAFARGLHSVN
CCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PEAQVKVIWVNSWYDPGKEREAAETLIAQGADVLSQHTDSPAPVQVAEEKGIFAFGQASD
CCCEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCEEEECCCCC
MSRFGPHAQLTAIVDNWNEYYIDRVKAVMDGTWKAEDTWGGLAAGMVHLAPYNAALPADV
HHHCCCCCEEEHHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH
VEKAEAVRKAIVDGSLHPFAGPLKNQAGQEIVPAGQVLADDKILSMDWYIEGVQGQLPK
HHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEECCEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MRTSIIRMLVGAALAAGLATGGAQADEPTKVGFIYVGPVGDFGWSHQHDQGRQALEKAFG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHC
DKVKTSFVESVQEGADAERVVRQFAAGGYDLVFTTSFGFMNPTLKVAQQFPKVKFEHATG
HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCEEECCCC
YKRSANVATYAARFYEGRYVIGVIAGLTTKSKVVGYVASFPIPEVVSGINAFARGLHSVN
CCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PEAQVKVIWVNSWYDPGKEREAAETLIAQGADVLSQHTDSPAPVQVAEEKGIFAFGQASD
CCCEEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCEEEECCCCC
MSRFGPHAQLTAIVDNWNEYYIDRVKAVMDGTWKAEDTWGGLAAGMVHLAPYNAALPADV
HHHCCCCCEEEHHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH
VEKAEAVRKAIVDGSLHPFAGPLKNQAGQEIVPAGQVLADDKILSMDWYIEGVQGQLPK
HHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEECCEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]