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The map label for this gene is 83593195

Identifier: 83593195

GI number: 83593195

Start: 2158112

End: 2158756

Strand: Direct

Name: 83593195

Synonym: Rru_A1860

Alternate gene names: NA

Gene position: 2158112-2158756 (Clockwise)

Preceding gene: 83593194

Following gene: 83593196

Centisome position: 49.58

GC content: 69.77

Gene sequence:

>645_bases
ATGACAGCGTGTAATCCCCAGGCGCCGGGGGTCGATTGCCCCCGGTGCCCGCGACTGGTCGCCTATCGGCTGGCCCTGCG
CCGCGATTTTCCCGACTGGGCGAATGCCCCGGTCCCCTCCTTCGGTCCGCTGGGCGCCCGCCTGCTGGTGGTCGGCTTGG
CGCCCGGCGTGCGCGGCGCCAATCGCACCGGCCGGCCCTTCACCGGCGATTACGCCGGCGACCTGCTCTATGCCACCTTG
ATCGATCTTGGTTTGATGACCGGGGTTTTCGACCGCCGGGCCGATGACGGCCTGACGCCGATCGACGTGCGCATCACCAA
CGCCGTGCGCTGCGTGCCGCCTGAAAACAAGCCGACCGGCCCAGAACAGGTCGCCTGCCGGCCGTTCCTGGCGGCGGAAA
TCGCCGCGATGCCGGCCCTACGCGGCATCCTGGCTTTGGGCCGCGTCGCCCACGAGGCGATCTTGCGCACGCTCGGCCAA
CCCCTGAAGGCCCACCCCTTCGCCCATGGCGCCCTGCACCCGATGCCGGGCGGCCTGCTGCTGGGCGAAAGCTATCACTG
CTCGCGCTACAACCAGAACACCGGCCGCCTGACCAACCCGATGTTCCGCGAGGCGGTCACGCGCTTGGTCGAGGCGATTA
GCTAG

Upstream 100 bases:

>100_bases
TGACGATGATGACGAGGACGATGAGGACGACGAGGACGAGGACGACCAGATCGATCAGTATATGCCCAAGTAAGGATGGC
TTTCGAGACGTTAAACGACA

Downstream 100 bases:

>100_bases
GACGGTGGGCCTGAAACTTGGTCCCCGCTCACCGCTCTAACAGACGGATATTGAAGCAAATCGTCGTCGCGGTCTGGTTC
AGATCGCTCGGAGATTTGCT

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTACNPQAPGVDCPRCPRLVAYRLALRRDFPDWANAPVPSFGPLGARLLVVGLAPGVRGANRTGRPFTGDYAGDLLYATL
IDLGLMTGVFDRRADDGLTPIDVRITNAVRCVPPENKPTGPEQVACRPFLAAEIAAMPALRGILALGRVAHEAILRTLGQ
PLKAHPFAHGALHPMPGGLLLGESYHCSRYNQNTGRLTNPMFREAVTRLVEAIS

Sequences:

>Translated_214_residues
MTACNPQAPGVDCPRCPRLVAYRLALRRDFPDWANAPVPSFGPLGARLLVVGLAPGVRGANRTGRPFTGDYAGDLLYATL
IDLGLMTGVFDRRADDGLTPIDVRITNAVRCVPPENKPTGPEQVACRPFLAAEIAAMPALRGILALGRVAHEAILRTLGQ
PLKAHPFAHGALHPMPGGLLLGESYHCSRYNQNTGRLTNPMFREAVTRLVEAIS
>Mature_213_residues
TACNPQAPGVDCPRCPRLVAYRLALRRDFPDWANAPVPSFGPLGARLLVVGLAPGVRGANRTGRPFTGDYAGDLLYATLI
DLGLMTGVFDRRADDGLTPIDVRITNAVRCVPPENKPTGPEQVACRPFLAAEIAAMPALRGILALGRVAHEAILRTLGQP
LKAHPFAHGALHPMPGGLLLGESYHCSRYNQNTGRLTNPMFREAVTRLVEAIS

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1259 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 22965; Mature: 22834

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTACNPQAPGVDCPRCPRLVAYRLALRRDFPDWANAPVPSFGPLGARLLVVGLAPGVRGA
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
NRTGRPFTGDYAGDLLYATLIDLGLMTGVFDRRADDGLTPIDVRITNAVRCVPPENKPTG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCCC
PEQVACRPFLAAEIAAMPALRGILALGRVAHEAILRTLGQPLKAHPFAHGALHPMPGGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEE
LGESYHCSRYNQNTGRLTNPMFREAVTRLVEAIS
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TACNPQAPGVDCPRCPRLVAYRLALRRDFPDWANAPVPSFGPLGARLLVVGLAPGVRGA
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
NRTGRPFTGDYAGDLLYATLIDLGLMTGVFDRRADDGLTPIDVRITNAVRCVPPENKPTG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCCC
PEQVACRPFLAAEIAAMPALRGILALGRVAHEAILRTLGQPLKAHPFAHGALHPMPGGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEE
LGESYHCSRYNQNTGRLTNPMFREAVTRLVEAIS
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]