| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593196
Identifier: 83593196
GI number: 83593196
Start: 2158994
End: 2159905
Strand: Direct
Name: 83593196
Synonym: Rru_A1861
Alternate gene names: NA
Gene position: 2158994-2159905 (Clockwise)
Preceding gene: 83593195
Following gene: 83593197
Centisome position: 49.6
GC content: 50.11
Gene sequence:
>912_bases ATGAGCGGGAAAGCCTGGAAAAGGGCGGCGGCGTTTACCCTGGCGATCATCGGGAGCGCCGCCATAACTTGGGCGCAGGA CACCCCCCGGTCTTCCCCGGAGACGACTCTCAGGCCCGAAGAACCGGCCCAGGCAAACAGCCCCGGCGACCAAGTTGCCT TGACCAGCGACCGCCTGGAGTTGGACCTGCGGGGCGAGTTGAAACGCCTGAGCCAACGCATCGACGATTTCGATAAGCAG ATCAGCGCCAATCGATCCCTGGTCGAGGGCAACAACGCCCATCTCGACCAGATCCTCTCGCTTCTTGGCCTCTTGCTCAC CTTCTTTTGTTTGGGAGCGGCCACTACGGGCTTTTTCGCATATAAAAACGCCGGTCGCCACGCCCAAGAGCAAGCCGATG AGTGGTTGAAGGCCAACGCGAACCCCCTTCTGGCGAAAACGGAACACGATCTGAGATCGGCGATCGAACCCATGATCAGA GATATGATCGCTCAGGGAGAAAGGGCGAAAGAAAACGCTGATGCAATAGAGAAAATAAAGAATAAAGTCGAACAAGATAT ATCGCCAAAACCATCCCTATCAGACAAAAACGAGATTTCAGCGGAAACAATATGTCAATCAGAAATGACCGCGCACCCTA CAATAAAAGAAGATTATTACAATATTGAATCTTTAAATGAAGAAAATTACTCTCTTGATGAACTTAGGACACTTGGACTC GGTGCTTTTTCTTCTGAAAATTACAGTCAGGCGTTTTCATTTTTTAAACGCATCACGCAAATGACCAACCTTAATAAATC AGATCTTATTCAAGCACATCTTAATATGGCCGCGAGCTTGGTAAAACTCGACCGCCTGGAGGAAGCCTCAAAAACCTACG AAATCATCATCCACATGCTGTCCAACCGCTGA
Upstream 100 bases:
>100_bases GCCAAGGCACCCCTGGAGGAAATCCCCCTCTCCTCCCCTCGCCACCCCCGCGATACCTTGCAAAACGGTAGGCGAAGGCG TGACGACGATCGGGGACGAC
Downstream 100 bases:
>100_bases TGGCCGTTGGATGGCGTCGATAGAGATCCTATTTTGGGGTGGTCAGTGGACTTGGGAATGCCAAGCCTTCACCAAGGCTC ACCGGTGCACGAAGATGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSGKAWKRAAAFTLAIIGSAAITWAQDTPRSSPETTLRPEEPAQANSPGDQVALTSDRLELDLRGELKRLSQRIDDFDKQ ISANRSLVEGNNAHLDQILSLLGLLLTFFCLGAATTGFFAYKNAGRHAQEQADEWLKANANPLLAKTEHDLRSAIEPMIR DMIAQGERAKENADAIEKIKNKVEQDISPKPSLSDKNEISAETICQSEMTAHPTIKEDYYNIESLNEENYSLDELRTLGL GAFSSENYSQAFSFFKRITQMTNLNKSDLIQAHLNMAASLVKLDRLEEASKTYEIIIHMLSNR
Sequences:
>Translated_303_residues MSGKAWKRAAAFTLAIIGSAAITWAQDTPRSSPETTLRPEEPAQANSPGDQVALTSDRLELDLRGELKRLSQRIDDFDKQ ISANRSLVEGNNAHLDQILSLLGLLLTFFCLGAATTGFFAYKNAGRHAQEQADEWLKANANPLLAKTEHDLRSAIEPMIR DMIAQGERAKENADAIEKIKNKVEQDISPKPSLSDKNEISAETICQSEMTAHPTIKEDYYNIESLNEENYSLDELRTLGL GAFSSENYSQAFSFFKRITQMTNLNKSDLIQAHLNMAASLVKLDRLEEASKTYEIIIHMLSNR >Mature_302_residues SGKAWKRAAAFTLAIIGSAAITWAQDTPRSSPETTLRPEEPAQANSPGDQVALTSDRLELDLRGELKRLSQRIDDFDKQI SANRSLVEGNNAHLDQILSLLGLLLTFFCLGAATTGFFAYKNAGRHAQEQADEWLKANANPLLAKTEHDLRSAIEPMIRD MIAQGERAKENADAIEKIKNKVEQDISPKPSLSDKNEISAETICQSEMTAHPTIKEDYYNIESLNEENYSLDELRTLGLG AFSSENYSQAFSFFKRITQMTNLNKSDLIQAHLNMAASLVKLDRLEEASKTYEIIIHMLSNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33804; Mature: 33673
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKAWKRAAAFTLAIIGSAAITWAQDTPRSSPETTLRPEEPAQANSPGDQVALTSDRLE CCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEE LDLRGELKRLSQRIDDFDKQISANRSLVEGNNAHLDQILSLLGLLLTFFCLGAATTGFFA EHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YKNAGRHAQEQADEWLKANANPLLAKTEHDLRSAIEPMIRDMIAQGERAKENADAIEKIK HHCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NKVEQDISPKPSLSDKNEISAETICQSEMTAHPTIKEDYYNIESLNEENYSLDELRTLGL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCCHHHHHHHCC GAFSSENYSQAFSFFKRITQMTNLNKSDLIQAHLNMAASLVKLDRLEEASKTYEIIIHML CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNR HCC >Mature Secondary Structure SGKAWKRAAAFTLAIIGSAAITWAQDTPRSSPETTLRPEEPAQANSPGDQVALTSDRLE CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEE LDLRGELKRLSQRIDDFDKQISANRSLVEGNNAHLDQILSLLGLLLTFFCLGAATTGFFA EHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YKNAGRHAQEQADEWLKANANPLLAKTEHDLRSAIEPMIRDMIAQGERAKENADAIEKIK HHCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NKVEQDISPKPSLSDKNEISAETICQSEMTAHPTIKEDYYNIESLNEENYSLDELRTLGL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCCHHHHHHHCC GAFSSENYSQAFSFFKRITQMTNLNKSDLIQAHLNMAASLVKLDRLEEASKTYEIIIHML CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA