| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593179
Identifier: 83593179
GI number: 83593179
Start: 2143067
End: 2143588
Strand: Direct
Name: 83593179
Synonym: Rru_A1844
Alternate gene names: NA
Gene position: 2143067-2143588 (Clockwise)
Preceding gene: 83593178
Following gene: 83593180
Centisome position: 49.23
GC content: 64.75
Gene sequence:
>522_bases ATGAGGCCGCCCCCCGCCCCCTTGGACGCCGACGCGGCCGATGCCGATGGCGTGATGGTCAAACGCGTCATCGCCTTCTT TATCGATGTGCTGTGCATCGCCCTGCTCTATCTGCCGGTGCTGCTGGTCTTGTCGCTGGCCTCGCTGCTGTCGTTGGGGA TCTTGTCGCCGCTGGTCGCCATCATCCTGGCCCTGGTGCCCGTCGCCTATCACAGCCTGCTGATCGCCGGCCCGTGGTCG GCCACCTTCGGCCAGCGCATGATGGATCTCTCGGTGCGCTCGATCAGCGGCGGTCGCCCCAGCCTGGGGCAGGCGGCGAT CAACGCCATCACCTTTTATACCCTGGGCAGCATAACCGGCTGGGTGATCACCCTGGTCGCCCTGACCAACCGCCAACGCC GCTGTCTCCACGATTTTCTGGCCGGAACCGTGGTTGTCAACCGCACCGGCCGCTCCCCTCTGGTTTTCGATCGAGGGACG TCGGCGGAGGATATTCTTTTCACAGGGGACAAGGACGCGTAG
Upstream 100 bases:
>100_bases GCGGCGGTAATGGCGGGGCGGCGCCCGCCGACCCGCTGAGCGGCCCCAAGCCGCCCAGCATCCTGGCGCCCGCCGACGGC GGTCCCGGAGCGGCCCCGCG
Downstream 100 bases:
>100_bases ACTCGTGATCTGGCGGTTGTTGAAACACGCCGCGCTGTAGAAGAGTTGTGCCCTATGGACCAGGGACCCATCAATCGGCC CCATTTCTTCTTCACCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRPPPAPLDADAADADGVMVKRVIAFFIDVLCIALLYLPVLLVLSLASLLSLGILSPLVAIILALVPVAYHSLLIAGPWS ATFGQRMMDLSVRSISGGRPSLGQAAINAITFYTLGSITGWVITLVALTNRQRRCLHDFLAGTVVVNRTGRSPLVFDRGT SAEDILFTGDKDA
Sequences:
>Translated_173_residues MRPPPAPLDADAADADGVMVKRVIAFFIDVLCIALLYLPVLLVLSLASLLSLGILSPLVAIILALVPVAYHSLLIAGPWS ATFGQRMMDLSVRSISGGRPSLGQAAINAITFYTLGSITGWVITLVALTNRQRRCLHDFLAGTVVVNRTGRSPLVFDRGT SAEDILFTGDKDA >Mature_173_residues MRPPPAPLDADAADADGVMVKRVIAFFIDVLCIALLYLPVLLVLSLASLLSLGILSPLVAIILALVPVAYHSLLIAGPWS ATFGQRMMDLSVRSISGGRPSLGQAAINAITFYTLGSITGWVITLVALTNRQRRCLHDFLAGTVVVNRTGRSPLVFDRGT SAEDILFTGDKDA
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18402; Mature: 18402
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPPPAPLDADAADADGVMVKRVIAFFIDVLCIALLYLPVLLVLSLASLLSLGILSPLVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILALVPVAYHSLLIAGPWSATFGQRMMDLSVRSISGGRPSLGQAAINAITFYTLGSITG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH WVITLVALTNRQRRCLHDFLAGTVVVNRTGRSPLVFDRGTSAEDILFTGDKDA HHHHHHHHHCHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCCCEEECCCCCC >Mature Secondary Structure MRPPPAPLDADAADADGVMVKRVIAFFIDVLCIALLYLPVLLVLSLASLLSLGILSPLVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILALVPVAYHSLLIAGPWSATFGQRMMDLSVRSISGGRPSLGQAAINAITFYTLGSITG HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH WVITLVALTNRQRRCLHDFLAGTVVVNRTGRSPLVFDRGTSAEDILFTGDKDA HHHHHHHHHCHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA