| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ate
Identifier: 83593180
GI number: 83593180
Start: 2143643
End: 2144383
Strand: Direct
Name: ate
Synonym: Rru_A1845
Alternate gene names: 83593180
Gene position: 2143643-2144383 (Clockwise)
Preceding gene: 83593179
Following gene: 83593181
Centisome position: 49.25
GC content: 63.43
Gene sequence:
>741_bases ATGGACCAGGGACCCATCAATCGGCCCCATTTCTTCTTCACCACCGCCCCGATGCCTTGCCCGTACTTGGAAGGGCATCT GGAACGCAAGATGGTGACCGATCTGACCGGCCCGGAAGCCGAACGGCTTCACGAAAGCCTGTCGCGCGCCGGGTTTCGGC GCAGCCACACCATCGCCTATGCCCCGGTCTGCCCGGGCTGCACGGCCTGCGTCCCTGTCCGCATCCGCGCCCGCGCCTTC GTGAAAAACAAATCCTTCCGCCGCATCGTCCGCGCCAATGCCGGGGTGACGGCGGAATACGTGCCGGCCCGGGCCACGGT CGAGCAGTTCCATCTTTTCTCGCAGTACCAGCAGGCCCGCCATGGCGAAAGCGATATGGCGCTGATGGGGTTTTTCGATT ACCGCTCGATGGTCGAAGACAGCCCGATCTCGACCTCGATCGCCGAATTCCGCGAGGCCGGGGGCGAATTGGTCGCCGCC TGCCTGATCGACCATCTCAGCGACGGCCTGTCGGCGGTCTATTCGTTCTTCAATACCACCCTGCCCCAAAGCCGGGGTCT TGGCACCTGGATGATCTTGTGGATGGTGGACGAAACCGTGCGCCGCGACCTCGACCACGTTTATCTCGGCTACTGGATCG CTGAAAGCTCGAAGATGGCCTACAAAGAGCGCTTTCAGCCCCTTGAGGTCTTCGGTCGGCGCGGCTGGATCGCCTTTGAC GAACGCGGCCGCCCGGGCTGA
Upstream 100 bases:
>100_bases GACGTCGGCGGAGGATATTCTTTTCACAGGGGACAAGGACGCGTAGACTCGTGATCTGGCGGTTGTTGAAACACGCCGCG CTGTAGAAGAGTTGTGCCCT
Downstream 100 bases:
>100_bases TCCTTCGGGCGCGCCGGCTGATCCTTGGGTGATTGTCGATACCCCTTTTCCGGCAGCGCAGCGAAAGAGTGTTTCATGGA TCGACGAGAGTTCCTTTCGG
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MDQGPINRPHFFFTTAPMPCPYLEGHLERKMVTDLTGPEAERLHESLSRAGFRRSHTIAYAPVCPGCTACVPVRIRARAF VKNKSFRRIVRANAGVTAEYVPARATVEQFHLFSQYQQARHGESDMALMGFFDYRSMVEDSPISTSIAEFREAGGELVAA CLIDHLSDGLSAVYSFFNTTLPQSRGLGTWMILWMVDETVRRDLDHVYLGYWIAESSKMAYKERFQPLEVFGRRGWIAFD ERGRPG
Sequences:
>Translated_246_residues MDQGPINRPHFFFTTAPMPCPYLEGHLERKMVTDLTGPEAERLHESLSRAGFRRSHTIAYAPVCPGCTACVPVRIRARAF VKNKSFRRIVRANAGVTAEYVPARATVEQFHLFSQYQQARHGESDMALMGFFDYRSMVEDSPISTSIAEFREAGGELVAA CLIDHLSDGLSAVYSFFNTTLPQSRGLGTWMILWMVDETVRRDLDHVYLGYWIAESSKMAYKERFQPLEVFGRRGWIAFD ERGRPG >Mature_246_residues MDQGPINRPHFFFTTAPMPCPYLEGHLERKMVTDLTGPEAERLHESLSRAGFRRSHTIAYAPVCPGCTACVPVRIRARAF VKNKSFRRIVRANAGVTAEYVPARATVEQFHLFSQYQQARHGESDMALMGFFDYRSMVEDSPISTSIAEFREAGGELVAA CLIDHLSDGLSAVYSFFNTTLPQSRGLGTWMILWMVDETVRRDLDHVYLGYWIAESSKMAYKERFQPLEVFGRRGWIAFD ERGRPG
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_RHORT (Q2RTA0)
Other databases:
- EMBL: CP000230 - RefSeq: YP_426932.1 - STRING: Q2RTA0 - GeneID: 3835269 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A1845 - NMPDR: fig|1085.1.peg.2419 - eggNOG: COG2935 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - BioCyc: RRUB269796:RRU_A1845-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 27954; Mature: 27954
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQGPINRPHFFFTTAPMPCPYLEGHLERKMVTDLTGPEAERLHESLSRAGFRRSHTIAY CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEE APVCPGCTACVPVRIRARAFVKNKSFRRIVRANAGVTAEYVPARATVEQFHLFSQYQQAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH HGESDMALMGFFDYRSMVEDSPISTSIAEFREAGGELVAACLIDHLSDGLSAVYSFFNTT CCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC LPQSRGLGTWMILWMVDETVRRDLDHVYLGYWIAESSKMAYKERFQPLEVFGRRGWIAFD CCCCCCCCCEEHHHHHHHHHHHHHHHEEHHHEEECCCHHHHHHHCCHHHHHCCCCCEEEC ERGRPG CCCCCC >Mature Secondary Structure MDQGPINRPHFFFTTAPMPCPYLEGHLERKMVTDLTGPEAERLHESLSRAGFRRSHTIAY CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEE APVCPGCTACVPVRIRARAFVKNKSFRRIVRANAGVTAEYVPARATVEQFHLFSQYQQAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH HGESDMALMGFFDYRSMVEDSPISTSIAEFREAGGELVAACLIDHLSDGLSAVYSFFNTT CCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC LPQSRGLGTWMILWMVDETVRRDLDHVYLGYWIAESSKMAYKERFQPLEVFGRRGWIAFD CCCCCCCCCEEHHHHHHHHHHHHHHHEEHHHEEECCCHHHHHHHCCHHHHHCCCCCEEEC ERGRPG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA