| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is hppA
Identifier: 83593153
GI number: 83593153
Start: 2116926
End: 2119034
Strand: Reverse
Name: hppA
Synonym: Rru_A1818
Alternate gene names: 83593153
Gene position: 2119034-2116926 (Counterclockwise)
Preceding gene: 83593154
Following gene: 83593152
Centisome position: 48.68
GC content: 64.77
Gene sequence:
>2109_bases ATGGCTGGCATCTATCTTTTCGTCGTAGCCGCCGCACTCGCGGCCCTTGGTTATGGCGCTCTCACCATCAAAACAATCAT GGCGGCTGATGCCGGCACCGCGCGGATGCAGGAGATTTCCGGCGCCGTGCAGGAAGGCGCCAGCGCGTTTCTCAATCGTC AGTACAAGACCATCGCCGTCGTCGGCGCGGTTGTTTTCGTTATTCTGACGGCGCTTCTTGGCATCTCGGTCGGCTTCGGC TTTCTGATCGGCGCCGTGTGCTCGGGCATCGCCGGTTATGTCGGCATGTACATCTCGGTGCGCGCCAATGTGCGCGTCGC CGCCGGGGCCCAGCAGGGACTGGCCCGGGGTCTGGAACTCGCCTTCCAGTCGGGCGCGGTGACCGGCATGCTGGTGGCCG GTCTGGCCCTGCTGTCGGTGGCCTTCTATTACATCCTGCTCGTCGGCATCGGCGCGACCGGCCGCGCGCTGATCGATCCG CTGGTGGCTCTGGGCTTTGGCGCCTCGCTGATCTCGATCTTCGCCCGTCTGGGTGGCGGCATCTTCACCAAGGGCGCCGA CGTGGGCGCCGATCTGGTGGGCAAGGTCGAAGCGGGGATCCCCGAGGATGACCCGCGCAATCCCGCCGTCATCGCCGACA ACGTGGGCGATAACGTGGGCGATTGCGCCGGCATGGCGGCCGACCTGTTCGAGACCTATGCCGTGACCGTCGTCGCCACC ATGGTCCTGGCCTCGATCTTCTTCGCCGGCGTTCCGGCGATGACCTCGATGATGGCCTATCCGCTGGCGATCGGCGGGGT CTGCATCCTGGCCTCGATCCTCGGCACCAAGTTCGTGAAGCTTGGCCCCAAGAACAACATCATGGGGGCGCTCTATCGCG GCTTCCTGGTGTCGGCGGGAGCGTCCTTCGTCGGGATCATCCTGGCCACGGCGATCGTCCCGGGCTTTGGCGACATCCAG GGCGCCAACGGGGTGCTCTATTCGGGCTTCGACCTGTTCTTGTGCGCCGTCATCGGCCTGCTGGTCACCGGTTTGCTGAT CTGGGTCACCGAATATTACACCGGCACCAATTTCCGGCCGGTCCGTTCGGTCGCCAAGGCCTCGACCACCGGCCACGGCA CCAACGTGATCCAGGGTCTGGCGATTTCGATGGAGGCGACGGCCCTGCCGGCGCTGATCATCTGCGCGGCCATCATCACC ACCTATCAGCTGTCGGGTCTGTTTGGCATCGCCATCACCGTGACCAGCATGCTGGCTTTGGCCGGGATGGTCGTGGCGCT CGACGCCTATGGTCCGGTGACCGATAACGCCGGCGGCATCGCCGAAATGGCCAATCTGCCCGAGGACGTGCGCAAGACCA CCGATGCGCTCGACGCCGTTGGCAACACCACCAAGGCGGTGACCAAGGGCTATGCTATCGGTTCGGCCGGCCTTGGCGCC CTGGTGCTGTTCGCCGCCTATACCGAGGATCTGGCCTTCTTCAAGGCCAATGTCGACGCCTATCCGGCCTTCGCCGGGGT GGATGTCAACTTCTCGCTGTCGAGCCCCTATGTGGTGGTCGGCCTGTTCATCGGCGGCCTGCTGCCCTATCTGTTCGGCT CGATGGGCATGACCGCCGTCGGCCGCGCCGCTGGCAGCGTCGTCGAGGAGGTTCGCCGTCAGTTCCGCGAAATCCCGGGC ATCATGGAAGGCACCGCCAAGCCGGAATACGGCCGCTGCGTCGACATGCTGACCAAGGCGGCGATCAAGGAGATGATCAT CCCCTCGCTGCTGCCGGTTCTGGCGCCGATCGTGCTGTACTTCGTTATCCTCGGCATCGCCGATAAATCGGCCGCCTTCT CGGCCCTGGGCGCCATGCTGCTCGGCGTGATCGTCACCGGTCTTTTCGTGGCGATCTCGATGACCGCCGGTGGCGGCGCC TGGGACAACGCCAAGAAGTACATCGAAGACGGCCACTACGGTGGCAAGGGGTCGGAAGCCCATAAGGCCGCCGTCACCGG CGACACCGTTGGCGATCCGTACAAGGACACCGCCGGTCCGGCGGTCAATCCGATGATCAAGATCACCAACATCGTCGCCC TGCTGCTGCTGGCGGTGCTGGCCCACTAA
Upstream 100 bases:
>100_bases TTGCGGCGAAGACCCGGCGGTCGATGTGGCTATTCGATCGCGGCGGGGTTTTTCCGCATTGCCCGCCGTTAGGCCCATTC AGGGAGGGATCGAACGAATC
Downstream 100 bases:
>100_bases CTCCGGCGATCGCTGGAAAACGACGCGGGGGCCCGGAGAGTGATCCGGGCCCCCGTTTTCATATGCCCAAGACTGGATTT CAGAGTAAAAAAAAGAGTGT
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound proton-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; H(+)-PPase
Number of amino acids: Translated: 702; Mature: 701
Protein sequence:
>702_residues MAGIYLFVVAAALAALGYGALTIKTIMAADAGTARMQEISGAVQEGASAFLNRQYKTIAVVGAVVFVILTALLGISVGFG FLIGAVCSGIAGYVGMYISVRANVRVAAGAQQGLARGLELAFQSGAVTGMLVAGLALLSVAFYYILLVGIGATGRALIDP LVALGFGASLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTVVAT MVLASIFFAGVPAMTSMMAYPLAIGGVCILASILGTKFVKLGPKNNIMGALYRGFLVSAGASFVGIILATAIVPGFGDIQ GANGVLYSGFDLFLCAVIGLLVTGLLIWVTEYYTGTNFRPVRSVAKASTTGHGTNVIQGLAISMEATALPALIICAAIIT TYQLSGLFGIAITVTSMLALAGMVVALDAYGPVTDNAGGIAEMANLPEDVRKTTDALDAVGNTTKAVTKGYAIGSAGLGA LVLFAAYTEDLAFFKANVDAYPAFAGVDVNFSLSSPYVVVGLFIGGLLPYLFGSMGMTAVGRAAGSVVEEVRRQFREIPG IMEGTAKPEYGRCVDMLTKAAIKEMIIPSLLPVLAPIVLYFVILGIADKSAAFSALGAMLLGVIVTGLFVAISMTAGGGA WDNAKKYIEDGHYGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAVLAH
Sequences:
>Translated_702_residues MAGIYLFVVAAALAALGYGALTIKTIMAADAGTARMQEISGAVQEGASAFLNRQYKTIAVVGAVVFVILTALLGISVGFG FLIGAVCSGIAGYVGMYISVRANVRVAAGAQQGLARGLELAFQSGAVTGMLVAGLALLSVAFYYILLVGIGATGRALIDP LVALGFGASLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTVVAT MVLASIFFAGVPAMTSMMAYPLAIGGVCILASILGTKFVKLGPKNNIMGALYRGFLVSAGASFVGIILATAIVPGFGDIQ GANGVLYSGFDLFLCAVIGLLVTGLLIWVTEYYTGTNFRPVRSVAKASTTGHGTNVIQGLAISMEATALPALIICAAIIT TYQLSGLFGIAITVTSMLALAGMVVALDAYGPVTDNAGGIAEMANLPEDVRKTTDALDAVGNTTKAVTKGYAIGSAGLGA LVLFAAYTEDLAFFKANVDAYPAFAGVDVNFSLSSPYVVVGLFIGGLLPYLFGSMGMTAVGRAAGSVVEEVRRQFREIPG IMEGTAKPEYGRCVDMLTKAAIKEMIIPSLLPVLAPIVLYFVILGIADKSAAFSALGAMLLGVIVTGLFVAISMTAGGGA WDNAKKYIEDGHYGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAVLAH >Mature_701_residues AGIYLFVVAAALAALGYGALTIKTIMAADAGTARMQEISGAVQEGASAFLNRQYKTIAVVGAVVFVILTALLGISVGFGF LIGAVCSGIAGYVGMYISVRANVRVAAGAQQGLARGLELAFQSGAVTGMLVAGLALLSVAFYYILLVGIGATGRALIDPL VALGFGASLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTVVATM VLASIFFAGVPAMTSMMAYPLAIGGVCILASILGTKFVKLGPKNNIMGALYRGFLVSAGASFVGIILATAIVPGFGDIQG ANGVLYSGFDLFLCAVIGLLVTGLLIWVTEYYTGTNFRPVRSVAKASTTGHGTNVIQGLAISMEATALPALIICAAIITT YQLSGLFGIAITVTSMLALAGMVVALDAYGPVTDNAGGIAEMANLPEDVRKTTDALDAVGNTTKAVTKGYAIGSAGLGAL VLFAAYTEDLAFFKANVDAYPAFAGVDVNFSLSSPYVVVGLFIGGLLPYLFGSMGMTAVGRAAGSVVEEVRRQFREIPGI MEGTAKPEYGRCVDMLTKAAIKEMIIPSLLPVLAPIVLYFVILGIADKSAAFSALGAMLLGVIVTGLFVAISMTAGGGAW DNAKKYIEDGHYGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAVLAH
Specific function: Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HPPA_RHORT (O68460)
Other databases:
- EMBL: AF044912 - EMBL: CP000230 - EMBL: AJ549291 - RefSeq: YP_426905.1 - STRING: O68460 - GeneID: 3835242 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A1818 - NMPDR: fig|1085.1.peg.2393 - eggNOG: COG3808 - HOGENOM: HBG593668 - OMA: AYLARQY - ProtClustDB: PRK00733 - BioCyc: RRUB269796:RRU_A1818-MONOMER - BRENDA: 3.6.1.1 - HAMAP: MF_01129 - InterPro: IPR004131 - PIRSF: PIRSF001265 - TIGRFAMs: TIGR01104
Pfam domain/function: PF03030 H_PPase
EC number: =3.6.1.1
Molecular weight: Translated: 71548; Mature: 71417
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xf4f9890)-; HASH(0xf47e2ec)-; HASH(0xf7640e8)-; HASH(0xf9594b0)-; HASH(0xfdf59d4)-; HASH(0xff56184)-; HASH(0xfffbd90)-; HASH(0xfecbf28)-; HASH(0xcbe2fdc)-; HASH(0xfd4309c)-; HASH(0xcbe31e0)-; HASH(0xeea7470)-; HASH(0xf8e69ac)-; HASH(0xf8540f4)-;
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIYLFVVAAALAALGYGALTIKTIMAADAGTARMQEISGAVQEGASAFLNRQYKTIAV CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH VGAVVFVILTALLGISVGFGFLIGAVCSGIAGYVGMYISVRANVRVAAGAQQGLARGLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEECCHHHHHHHHHHH AFQSGAVTGMLVAGLALLSVAFYYILLVGIGATGRALIDPLVALGFGASLISIFARLGGG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCC IFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTVVAT EEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH MVLASIFFAGVPAMTSMMAYPLAIGGVCILASILGTKFVKLGPKNNIMGALYRGFLVSAG HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCC ASFVGIILATAIVPGFGDIQGANGVLYSGFDLFLCAVIGLLVTGLLIWVTEYYTGTNFRP HHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VRSVAKASTTGHGTNVIQGLAISMEATALPALIICAAIITTYQLSGLFGIAITVTSMLAL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGMVVALDAYGPVTDNAGGIAEMANLPEDVRKTTDALDAVGNTTKAVTKGYAIGSAGLGA HHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH LVLFAAYTEDLAFFKANVDAYPAFAGVDVNFSLSSPYVVVGLFIGGLLPYLFGSMGMTAV HHHHHHHHHHHHHHHCCCCCCCCEECCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHH GRAAGSVVEEVRRQFREIPGIMEGTAKPEYGRCVDMLTKAAIKEMIIPSLLPVLAPIVLY HHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVILGIADKSAAFSALGAMLLGVIVTGLFVAISMTAGGGAWDNAKKYIEDGHYGGKGSEA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC HKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAVLAH CHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure AGIYLFVVAAALAALGYGALTIKTIMAADAGTARMQEISGAVQEGASAFLNRQYKTIAV CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH VGAVVFVILTALLGISVGFGFLIGAVCSGIAGYVGMYISVRANVRVAAGAQQGLARGLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEECCHHHHHHHHHHH AFQSGAVTGMLVAGLALLSVAFYYILLVGIGATGRALIDPLVALGFGASLISIFARLGGG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCC IFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTVVAT EEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH MVLASIFFAGVPAMTSMMAYPLAIGGVCILASILGTKFVKLGPKNNIMGALYRGFLVSAG HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCC ASFVGIILATAIVPGFGDIQGANGVLYSGFDLFLCAVIGLLVTGLLIWVTEYYTGTNFRP HHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VRSVAKASTTGHGTNVIQGLAISMEATALPALIICAAIITTYQLSGLFGIAITVTSMLAL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGMVVALDAYGPVTDNAGGIAEMANLPEDVRKTTDALDAVGNTTKAVTKGYAIGSAGLGA HHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH LVLFAAYTEDLAFFKANVDAYPAFAGVDVNFSLSSPYVVVGLFIGGLLPYLFGSMGMTAV HHHHHHHHHHHHHHHCCCCCCCCEECCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHH GRAAGSVVEEVRRQFREIPGIMEGTAKPEYGRCVDMLTKAAIKEMIIPSLLPVLAPIVLY HHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVILGIADKSAAFSALGAMLLGVIVTGLFVAISMTAGGGAWDNAKKYIEDGHYGGKGSEA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC HKAAVTGDTVGDPYKDTAGPAVNPMIKITNIVALLLLAVLAH CHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9630689; 11956221