Click here to switch to the map view.

The map label for this gene is phbC [H]

Identifier: 83593151

GI number: 83593151

Start: 2111959

End: 2113761

Strand: Direct

Name: phbC [H]

Synonym: Rru_A1816

Alternate gene names: 83593151

Gene position: 2111959-2113761 (Clockwise)

Preceding gene: 83593150

Following gene: 83593164

Centisome position: 48.52

GC content: 66.28

Gene sequence:

>1803_bases
ATGACCGACACGCGCGCCGAAGCCGACTTAACCGAGGTTTGGCGGGCCTGGGCGGCCTGGGGCGAGAAAAGCCGGACGAT
GTGGGCAACGGCCCTGGGCGGCGCGGCGCCCCCCTCTTCCCCATCCCCCTCGGGGCCCGACCCGGCCGTTGGGGGCGGCC
CGGCCGTCGGGGGCGACGCGGCGCGGGCCTTCCTTGAGGGGGTTTTGCGCCCTTCCCAACCCGTTCTGGACGCCCAGGCG
GCCTGGGCCCGCGATATCGCGGCGCTGTGTCAGGCCGCCGCTAAGCGGCTGCGGGGCGAAGAGGCGGCGCCGGTGATCGA
ACCGGCGGGCGATGACAAGCGCTTCAAAGATGACGCCTGGACCAAGGATCCGCTGTTTGACACCCTGAAGCAGGGCTATC
TGCTGACCGCCCGGCTGGTCGCCACCACCTTGGAAAACAGCGGCGGCGACCCGGCCTGCCGCCAGCGCCTCGCCTTTTAT
GGGCGTCAGGTGGTCGACGCCCTCGCCCCGACCAATTTCGCCGCCACCAATCCGCTGGTTCGGCGAACCGCCCTAGAAAG
CGGCGGCAAAAGCCTGTTGAACGGGCTGGAAAATCTGTTGCGCGACCTGGAACGCGGCGGCGGCCGGCTGCGCCCGACGA
TGAGCGATGAAACCGCCTTCGAGGTTGGTCGCACCCTGGCCATGACGCCGGGCAAGGTGGTCTTTCAAAACGCCCTGATG
CAGTTGATCTTATATGCGCCGACCACGCCGAAGGTCCACAAACGGCCCTTGCTGGTGGTGCCGCCGTGGATCAATAAATT
CTACATCCTGGATCTGACGGAAAAGAACTCGCTGATCAAATACATGGTCGATCAGGGCTTCAGCGTGTTCGTCATCTCCT
GGGTCAACCCCGATGCCGGCTTGGCGGAAACACGCTTCGAGGATTACCTCAGCCAGGGGCCGCTGGCCGCCATGGAGGTG
ATGGCCGAGATCACCGGCCAGCGCGCTCTCGGACTGGTCGGCTATTGCATCGGCGGCACCCTGACCGCCTGCACCCTGGC
GGTACTGGCGGCGCGACGGGACCATCGGGTGAAATCGGCCACCCTGCTTACTACCCTGGTCGATTTTTCCGAGCCGGGCG
AGTTGGGCGTTTTCATCGACCCGCCCCTGCTTGACGCCCTTGACGACCAGATGGCCCGCGACGGCGGGCTTGACGGCGAC
CTCTTGTCGATGGCCTTCAACATGCTGCGCGACAACGACCTGATCTGGTCGGTCTTCATCAACAACTACCTGCTGGGCAA
GACCCCCGCCGCCTTCGATCTGCTCTATTGGAACGGCGATTCAACGCGGATGCCCGCCGCCATGCAGCGTTATTACCTGC
GCGAGATGTACCAGAAGAACAAGCTCGTCCAGCCCGGCGGCCTGACCGTGCTTGGCCATGCCCTCGACCTGCGGCGCATT
CGCACCCCGGTTTATCTTCTGTCGGCCCGCGACGATCACATCGCGCCGTGGACAAGCACCTTCAAGGCCACCGGGCTTTA
TGGCGGACCGCTGCGCTTCGTGCTGGCGGGCAGCGGCCATATCGCCGGGGTGATCAACCCGCCGGCCAAGGCCCGCTACG
GCTATTGGACCAATGCGGACACCTCCCTGGAGGCCGAGTCCTGGCTAGAGGGCGCCACGCCCCACGGGGGCTCCTGGTGG
CCCGATTGGGCGGCCTGGGCGGCCGGTTACGCTGGCCCCAAAGTCGCCGCCCGCGACCCGACCAAAGGCCCCCGCCCGCC
TTTGGAAGACGCGCCGGGATCTTACGTCAAGGTTAGGATCTGA

Upstream 100 bases:

>100_bases
CTGGATAATCTTGACGCCTATTTCGGCGGCCGCGAGCCGCCCCACCGGATCGCCTGACCGCCCTTGGTCAGGCCGACCGT
CCGAACGGGAGGGAAAGACC

Downstream 100 bases:

>100_bases
GGGGGCGCTTCGAGGGGGGCGGATCGGCATAGGGGCGACTCACTTGTCGCGTTTTACTTCGTGCGTCACAACCAATTGAG
CAATTACCGAGACTGCCCCT

Product: Poly(R)-hydroxyalkanoic acid synthase, class I

Products: NA

Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MTDTRAEADLTEVWRAWAAWGEKSRTMWATALGGAAPPSSPSPSGPDPAVGGGPAVGGDAARAFLEGVLRPSQPVLDAQA
AWARDIAALCQAAAKRLRGEEAAPVIEPAGDDKRFKDDAWTKDPLFDTLKQGYLLTARLVATTLENSGGDPACRQRLAFY
GRQVVDALAPTNFAATNPLVRRTALESGGKSLLNGLENLLRDLERGGGRLRPTMSDETAFEVGRTLAMTPGKVVFQNALM
QLILYAPTTPKVHKRPLLVVPPWINKFYILDLTEKNSLIKYMVDQGFSVFVISWVNPDAGLAETRFEDYLSQGPLAAMEV
MAEITGQRALGLVGYCIGGTLTACTLAVLAARRDHRVKSATLLTTLVDFSEPGELGVFIDPPLLDALDDQMARDGGLDGD
LLSMAFNMLRDNDLIWSVFINNYLLGKTPAAFDLLYWNGDSTRMPAAMQRYYLREMYQKNKLVQPGGLTVLGHALDLRRI
RTPVYLLSARDDHIAPWTSTFKATGLYGGPLRFVLAGSGHIAGVINPPAKARYGYWTNADTSLEAESWLEGATPHGGSWW
PDWAAWAAGYAGPKVAARDPTKGPRPPLEDAPGSYVKVRI

Sequences:

>Translated_600_residues
MTDTRAEADLTEVWRAWAAWGEKSRTMWATALGGAAPPSSPSPSGPDPAVGGGPAVGGDAARAFLEGVLRPSQPVLDAQA
AWARDIAALCQAAAKRLRGEEAAPVIEPAGDDKRFKDDAWTKDPLFDTLKQGYLLTARLVATTLENSGGDPACRQRLAFY
GRQVVDALAPTNFAATNPLVRRTALESGGKSLLNGLENLLRDLERGGGRLRPTMSDETAFEVGRTLAMTPGKVVFQNALM
QLILYAPTTPKVHKRPLLVVPPWINKFYILDLTEKNSLIKYMVDQGFSVFVISWVNPDAGLAETRFEDYLSQGPLAAMEV
MAEITGQRALGLVGYCIGGTLTACTLAVLAARRDHRVKSATLLTTLVDFSEPGELGVFIDPPLLDALDDQMARDGGLDGD
LLSMAFNMLRDNDLIWSVFINNYLLGKTPAAFDLLYWNGDSTRMPAAMQRYYLREMYQKNKLVQPGGLTVLGHALDLRRI
RTPVYLLSARDDHIAPWTSTFKATGLYGGPLRFVLAGSGHIAGVINPPAKARYGYWTNADTSLEAESWLEGATPHGGSWW
PDWAAWAAGYAGPKVAARDPTKGPRPPLEDAPGSYVKVRI
>Mature_599_residues
TDTRAEADLTEVWRAWAAWGEKSRTMWATALGGAAPPSSPSPSGPDPAVGGGPAVGGDAARAFLEGVLRPSQPVLDAQAA
WARDIAALCQAAAKRLRGEEAAPVIEPAGDDKRFKDDAWTKDPLFDTLKQGYLLTARLVATTLENSGGDPACRQRLAFYG
RQVVDALAPTNFAATNPLVRRTALESGGKSLLNGLENLLRDLERGGGRLRPTMSDETAFEVGRTLAMTPGKVVFQNALMQ
LILYAPTTPKVHKRPLLVVPPWINKFYILDLTEKNSLIKYMVDQGFSVFVISWVNPDAGLAETRFEDYLSQGPLAAMEVM
AEITGQRALGLVGYCIGGTLTACTLAVLAARRDHRVKSATLLTTLVDFSEPGELGVFIDPPLLDALDDQMARDGGLDGDL
LSMAFNMLRDNDLIWSVFINNYLLGKTPAAFDLLYWNGDSTRMPAAMQRYYLREMYQKNKLVQPGGLTVLGHALDLRRIR
TPVYLLSARDDHIAPWTSTFKATGLYGGPLRFVLAGSGHIAGVINPPAKARYGYWTNADTSLEAESWLEGATPHGGSWWP
DWAAWAAGYAGPKVAARDPTKGPRPPLEDAPGSYVKVRI

Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 65082; Mature: 64951

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTRAEADLTEVWRAWAAWGEKSRTMWATALGGAAPPSSPSPSGPDPAVGGGPAVGGDA
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
ARAFLEGVLRPSQPVLDAQAAWARDIAALCQAAAKRLRGEEAAPVIEPAGDDKRFKDDAW
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TKDPLFDTLKQGYLLTARLVATTLENSGGDPACRQRLAFYGRQVVDALAPTNFAATNPLV
CCCHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
RRTALESGGKSLLNGLENLLRDLERGGGRLRPTMSDETAFEVGRTLAMTPGKVVFQNALM
HHHHHHCCHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCEEECCCCHHHHHHHHH
QLILYAPTTPKVHKRPLLVVPPWINKFYILDLTEKNSLIKYMVDQGFSVFVISWVNPDAG
HHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCC
LAETRFEDYLSQGPLAAMEVMAEITGQRALGLVGYCIGGTLTACTLAVLAARRDHRVKSA
HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
TLLTTLVDFSEPGELGVFIDPPLLDALDDQMARDGGLDGDLLSMAFNMLRDNDLIWSVFI
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC
NNYLLGKTPAAFDLLYWNGDSTRMPAAMQRYYLREMYQKNKLVQPGGLTVLGHALDLRRI
CCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHH
RTPVYLLSARDDHIAPWTSTFKATGLYGGPLRFVLAGSGHIAGVINPPAKARYGYWTNAD
CCCEEEEECCCCCCCCCCCCCEECCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCC
TSLEAESWLEGATPHGGSWWPDWAAWAAGYAGPKVAARDPTKGPRPPLEDAPGSYVKVRI
CCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
TDTRAEADLTEVWRAWAAWGEKSRTMWATALGGAAPPSSPSPSGPDPAVGGGPAVGGDA
CCCCCCCHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
ARAFLEGVLRPSQPVLDAQAAWARDIAALCQAAAKRLRGEEAAPVIEPAGDDKRFKDDAW
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TKDPLFDTLKQGYLLTARLVATTLENSGGDPACRQRLAFYGRQVVDALAPTNFAATNPLV
CCCHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
RRTALESGGKSLLNGLENLLRDLERGGGRLRPTMSDETAFEVGRTLAMTPGKVVFQNALM
HHHHHHCCHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCEEECCCCHHHHHHHHH
QLILYAPTTPKVHKRPLLVVPPWINKFYILDLTEKNSLIKYMVDQGFSVFVISWVNPDAG
HHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCC
LAETRFEDYLSQGPLAAMEVMAEITGQRALGLVGYCIGGTLTACTLAVLAARRDHRVKSA
HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
TLLTTLVDFSEPGELGVFIDPPLLDALDDQMARDGGLDGDLLSMAFNMLRDNDLIWSVFI
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC
NNYLLGKTPAAFDLLYWNGDSTRMPAAMQRYYLREMYQKNKLVQPGGLTVLGHALDLRRI
CCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHH
RTPVYLLSARDDHIAPWTSTFKATGLYGGPLRFVLAGSGHIAGVINPPAKARYGYWTNAD
CCCEEEEECCCCCCCCCCCCCEECCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCC
TSLEAESWLEGATPHGGSWWPDWAAWAAGYAGPKVAARDPTKGPRPPLEDAPGSYVKVRI
CCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9748438 [H]