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The map label for this gene is ybhR [H]

Identifier: 83593125

GI number: 83593125

Start: 2081263

End: 2082378

Strand: Reverse

Name: ybhR [H]

Synonym: Rru_A1790

Alternate gene names: 83593125

Gene position: 2082378-2081263 (Counterclockwise)

Preceding gene: 83593126

Following gene: 83593122

Centisome position: 47.84

GC content: 60.48

Gene sequence:

>1116_bases
ATGGGCGGAGGAACGCGGCTCAAAGCGTTGATCGTCAAGGAATTCCTGGCGATTTTGCGCGATCCGAAAGGTCGGATGAT
CCTGATCGTCCCGCCGCTGCTCCAGCTTTTCGTCTTTTCCTATGCGACGACTTTGGAGGTCAAGAACGCCGATATCATTC
TGCTGAACCGGGATTCTGGCGGCTGGGGATGGGAGCTGGTTCAGCGCCTCGACGGAACGCCGACGATCGGGCGCATTCTC
ATCACGGGGGATCCGGCGCAGGTGCGCGCCGCGATCGATGGGCAACGGGTTCTGGCGGCCGTTGAAATCGGACCCGCGTT
CTCGCGCGATATCGAAGCCGGTCGACCGGCAACGGTGCAGATCCTTCTCGATGGTCGGCGCTCGAACGCCGCGCAGATCG
TGGCCGGCTATCTCAATCAGATCGTGGCTGATCTCGCCGCCGAAACCCCGCGCGGCCGACGGACGGAGGCGAAGGCGCCC
ACCGTTATCGCCCGCAGTTGGTTCAATCCCAACCTGCTTTCCCAATGGGCGATGGTGCCCGGGCTGGTCGCCATTATCGC
CCTGCTGACCGGGCTGGTGGTCACGGCGCTCTCGATCGCCCGCGAACGGGAATTCGGCACCTTCGATCAGCTTATGGTCT
CGCCCTTGCGGACCCACGAGATTCTGGCGGGGAAGATGATCCCGCCCATCCTCATCGGTTTGGCCCATATCACGGCTTTT
CTGGTGGTTTCGATTTTCGTTTTCGAGATTCCGTTTCGCGGTTCACTTTTTGTTCTTTATGGCAGTTCGGTTGTCTATCT
GGCGGCGGTCGTCGGGCTTGGTCTGTTCATCTCGGCGCTGTCCATGACCCAGCAGCAAGCGATCCTTGGGGCTTTTATGC
TGATGGTGCCGATGGTCTTGTTGTCGGGGTTCGCCTCGCCAATCGACAACATGCCCGAATGGCTCCAGCCGCTGACCCGG
CTTGATCCGCTGCGCTATTATCTGGTGATCGTCAAAGGGCTGTTCTTAAAGGATCTGGCTTTGACCGAGGTGATCGCCAA
TGTCGTTCCTTTGGCGGCCATCGCCGTGGTCACCCTGGGCGCCGCCGCCTGGCTCTTTCGTCGTCGGATGGAATAG

Upstream 100 bases:

>100_bases
ATCTGGCCGATGTTTCTACAAAATATCGCGATCACCTTGGGGATCGGGGCGGTGTTTTTTGCCCTTGCCCTGGTCAATAC
CCGCAAGAGGATTGGTTGAG

Downstream 100 bases:

>100_bases
GCGAAGGCGGCCCACGGGGGCCGCCTTGCTTTGCTATCCGTCGATTAAGAGCGGGATGGCGTCTTACATGCCTTCGGGCT
TGGGCGTTTCGCGGGTGCTG

Product: ABC-2 transporter component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MGGGTRLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWELVQRLDGTPTIGRIL
ITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQILLDGRRSNAAQIVAGYLNQIVADLAAETPRGRRTEAKAP
TVIARSWFNPNLLSQWAMVPGLVAIIALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAF
LVVSIFVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMVPMVLLSGFASPIDNMPEWLQPLTR
LDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTLGAAAWLFRRRME

Sequences:

>Translated_371_residues
MGGGTRLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWELVQRLDGTPTIGRIL
ITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQILLDGRRSNAAQIVAGYLNQIVADLAAETPRGRRTEAKAP
TVIARSWFNPNLLSQWAMVPGLVAIIALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAF
LVVSIFVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMVPMVLLSGFASPIDNMPEWLQPLTR
LDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTLGAAAWLFRRRME
>Mature_370_residues
GGGTRLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWELVQRLDGTPTIGRILI
TGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQILLDGRRSNAAQIVAGYLNQIVADLAAETPRGRRTEAKAPT
VIARSWFNPNLLSQWAMVPGLVAIIALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAFL
VVSIFVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMVPMVLLSGFASPIDNMPEWLQPLTRL
DPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTLGAAAWLFRRRME

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=365, Percent_Identity=43.013698630137, Blast_Score=305, Evalue=3e-84,
Organism=Escherichia coli, GI1787011, Length=342, Percent_Identity=32.1637426900585, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI48994943, Length=374, Percent_Identity=26.4705882352941, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI226510979, Length=293, Percent_Identity=27.3037542662116, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40314; Mature: 40182

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGGTRLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSG
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHEEEECCCEEEEEECCCC
GWGWELVQRLDGTPTIGRILITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQ
CHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCEEE
ILLDGRRSNAAQIVAGYLNQIVADLAAETPRGRRTEAKAPTVIARSWFNPNLLSQWAMVP
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH
GLVAIIALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAF
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVSIFVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMVPMVL
HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGFASPIDNMPEWLQPLTRLDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTLG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAWLFRRRME
HHHHHHHHHCC
>Mature Secondary Structure 
GGGTRLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSG
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHEEEECCCEEEEEECCCC
GWGWELVQRLDGTPTIGRILITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQ
CHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCEEE
ILLDGRRSNAAQIVAGYLNQIVADLAAETPRGRRTEAKAPTVIARSWFNPNLLSQWAMVP
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH
GLVAIIALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAF
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVSIFVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMVPMVL
HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGFASPIDNMPEWLQPLTRLDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTLG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAWLFRRRME
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]