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The map label for this gene is yajC [H]

Identifier: 83593100

GI number: 83593100

Start: 2057914

End: 2058345

Strand: Reverse

Name: yajC [H]

Synonym: Rru_A1765

Alternate gene names: 83593100

Gene position: 2058345-2057914 (Counterclockwise)

Preceding gene: 83593102

Following gene: 83593099

Centisome position: 47.29

GC content: 61.57

Gene sequence:

>432_bases
ATGAAATGGAACGAGGACCTGATGCTTATCTCCCCGGCTTATGCCCAATCGGCTCCCGGAGGCGCGCTGGGCGGCCTGGA
GGCCTTCCTGCCGCTCATTCTGATCTTTGTCATCTTCTACTTCCTGCTCATTCGCCCGCAGCAGCGCCGGATGAAGGAAC
ACAAGGCGATGCTGAGCGCGGTTCGGCGCGGCGACAAGGTCGTTACCAACGGCGGCCTGATCGGCACGGTGGTCAAGGTG
ATCAACGAACAGGAACTGAGCCTGGAGATCGCCGAGAACGTGAAGGTTCGGGTCATGCGCGATATGATCGGCAATGTGTT
GTCCAAGACCGAGCCGGTGCCCGGCGAAGCGTCGAACGATACCGTCGATCCCGCCGCCCCCAAGGATGCCCCGGCCTCGC
GCCTGAAGGGCTTCTTCGGCGGCAAGAAGTAA

Upstream 100 bases:

>100_bases
TAATCCCCGGCCCTGGGTGTTTGCAAGCGGCGACCGGGCTGGGTATAGTCCGCTCTCCCCCGGCGGGTGGAGCCATGGCG
GCTTCCCGCCAAGACCACCC

Downstream 100 bases:

>100_bases
GTATATATCAAGCACACGTCGGTCCGTTGGGGCGATACCGGTTCGATCACCAGGAACCGGAGCCGCCAACGGGGTGACCG
GGCGGAGTTCGGCTTCGGCG

Product: protein translocase subunit yajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKWNEDLMLISPAYAQSAPGGALGGLEAFLPLILIFVIFYFLLIRPQQRRMKEHKAMLSAVRRGDKVVTNGGLIGTVVKV
INEQELSLEIAENVKVRVMRDMIGNVLSKTEPVPGEASNDTVDPAAPKDAPASRLKGFFGGKK

Sequences:

>Translated_143_residues
MKWNEDLMLISPAYAQSAPGGALGGLEAFLPLILIFVIFYFLLIRPQQRRMKEHKAMLSAVRRGDKVVTNGGLIGTVVKV
INEQELSLEIAENVKVRVMRDMIGNVLSKTEPVPGEASNDTVDPAAPKDAPASRLKGFFGGKK
>Mature_143_residues
MKWNEDLMLISPAYAQSAPGGALGGLEAFLPLILIFVIFYFLLIRPQQRRMKEHKAMLSAVRRGDKVVTNGGLIGTVVKV
INEQELSLEIAENVKVRVMRDMIGNVLSKTEPVPGEASNDTVDPAAPKDAPASRLKGFFGGKK

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=101, Percent_Identity=36.6336633663366, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 15606; Mature: 15606

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWNEDLMLISPAYAQSAPGGALGGLEAFLPLILIFVIFYFLLIRPQQRRMKEHKAMLSA
CCCCCCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VRRGDKVVTNGGLIGTVVKVINEQELSLEIAENVKVRVMRDMIGNVLSKTEPVPGEASND
HHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TVDPAAPKDAPASRLKGFFGGKK
CCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKWNEDLMLISPAYAQSAPGGALGGLEAFLPLILIFVIFYFLLIRPQQRRMKEHKAMLSA
CCCCCCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VRRGDKVVTNGGLIGTVVKVINEQELSLEIAENVKVRVMRDMIGNVLSKTEPVPGEASND
HHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TVDPAAPKDAPASRLKGFFGGKK
CCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]