| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593058
Identifier: 83593058
GI number: 83593058
Start: 2015591
End: 2016985
Strand: Reverse
Name: 83593058
Synonym: Rru_A1723
Alternate gene names: NA
Gene position: 2016985-2015591 (Counterclockwise)
Preceding gene: 83593060
Following gene: 83593052
Centisome position: 46.34
GC content: 62.87
Gene sequence:
>1395_bases ATGCTTCGAGGGGGAGAGCGCGAGGTGGTTCACAAGGTTCTTATGCACGCCGGGGCCGCTACCCTGGCCTTGGGGGCGGC CTTGCCGGCCCTGGCCCAGGAAAAATTCCCCGCCGAATTGGCCGGTCAGGCCATGCTGCCGGCGATGACCCTGGTTCAGC CGCCGGCCGACGCCCCGGCCGCCCTTGCGGTCTCGGGCAAATTCACCCTGCCCGGGCAAAGGATCGACGCGGTGGGAACG GTCGCCGGCACCTCGTTCCTGTCGGATAAGACGGCGCCGCGGCCGACCGGCTTGTCGCTGCCCTTCGCCGGGCAGCCGGT TCAGGGGTTCTCCGGCATCGAAACCCTCAAGGATGGCACCTTCCGGGTGATTACCGATAACGGCTTCGGCGCCAAGGCCA ATTCCGCCGACGCCATGCTGATGGTCCACACCCTGCGCCCCGATTGGGCGAGCGGCGTTCTCAGCCGGCTTTCGACGACC TTCCTCGCCGATCCCGACCGCAAGCTGCCCTTCGTCATCGTCAATGAAGGGACCGAAACGCGCTATCTGACCGGTGCCGA TCTCGATATCGAATCCGTCCAGCAGATCGGCGAGGATTTGTGGTTCGGCGAGGAATTCGGCCCCTATCTGCTGCGCACCG ATCGAGCGGGCAAGGTGACGGGCTTCTTCCAGACCGAGGTTGACGGCAAGGTCGTTCATTCGCCCGACCATCTGGCGGTG GCGACCCCGGCGGTTCCGGGCAAGGTGAGCTTCGAGATCCGCCGCTCGCGCGGTTTCGAAGGCATGGCCGCCTCGCCCGA TGGCCGCTTCCTTTATCCGCTGCTTGAAGGGCCGTTGTGGATCGACGCCACCCAGACCTGGGAAACCAAGGACGGCAAGG AAGTCCTGCGCATCTTGGAATTCGATGTGCAAAAGCAGGCCTGGAGCGGGCGCAGCTGGAAATACGCCCTGGAGGCCAAC GGCAATAACATCGGCGATTTCAATATGATCGACGGCGAAACCGGCCTGATCATCGAACGCGACAACGGCGAGGGCGAGGC CGCCCAGGCCTGTCCGGCCGAGCCTAAGCCCGAGTGCTTCAACATCCCGGCCCGTTTCAAGCGCGTCTATAAGATCGATT TGTCGCAAGCCGATGGCGAAGGCGTCGTCAAGAAGATCGGCTATATCGATCTGCTCGATATCGACGATCCCAAGGGCCTC GCCCACCAGGGCGGCCACGATGGCAAGCTGACCTTCCCCTTCGTCACCATCGAGAACGTCGACATCGTCGATGCCGATCA CATCATCGTCGGCAATGACAACAATCTTCCCTATTCGACGGGGCGGGCCATCGGCCGCAACGACGATAACGAGATGATCT TGCTGAAAGTCAGCGACTTCCTCAAAGCCAGATAA
Upstream 100 bases:
>100_bases CCTGGTCCCCAAGGCCTGTCATCGAAGCTTTGCCATATCGTCACCGACTGTTCACTCGTCGCGCTCCCCCCGGCCTCTTA TTCTCCGGCCGAAAGTCGCC
Downstream 100 bases:
>100_bases GCGAGGGTCGGCAGAGGATTACAGAAATCCGGCTCCGACGTTGATGACCAGGGCGAGAATCGTCGTATTAAACAAAAATG ATAAGATCGAATGGGATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Signal Peptide; Periplasmic Protein; Glycerophosphoryl Diester Phosphodiesterase Family; PEP-CTERM Exosortase Interaction Domain Protein
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPAALAVSGKFTLPGQRIDAVGT VAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGTFRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTT FLADPDRKLPFVIVNEGTETRYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILEFDVQKQAWSGRSWKYALEAN GNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECFNIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGL AHQGGHDGKLTFPFVTIENVDIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR
Sequences:
>Translated_464_residues MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPAALAVSGKFTLPGQRIDAVGT VAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGTFRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTT FLADPDRKLPFVIVNEGTETRYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILEFDVQKQAWSGRSWKYALEAN GNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECFNIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGL AHQGGHDGKLTFPFVTIENVDIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR >Mature_464_residues MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPAALAVSGKFTLPGQRIDAVGT VAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGTFRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTT FLADPDRKLPFVIVNEGTETRYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILEFDVQKQAWSGRSWKYALEAN GNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECFNIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGL AHQGGHDGKLTFPFVTIENVDIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50101; Mature: 50101
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPA CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCHHCCCHHEECCCCCCCC ALAVSGKFTLPGQRIDAVGTVAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGT EEEEECEEECCCCCCCCEEHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC FRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTTFLADPDRKLPFVIVNEGTET EEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCE RYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEECCCCEEE ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILE ECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCEEEECCCCCCCCCHHHHHHHHH FDVQKQAWSGRSWKYALEANGNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECF HHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCEEEEECCCCCCCHHHCCCCCCCCCCC NIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGLAHQGGHDGKLTFPFVTIENV CCCHHHEEEEEEECCCCCCCCHHHHCCEEEEEECCCCCCHHHCCCCCCEEEEEEEEECCE DIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR EEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCC >Mature Secondary Structure MLRGGEREVVHKVLMHAGAATLALGAALPALAQEKFPAELAGQAMLPAMTLVQPPADAPA CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCHHCCCHHEECCCCCCCC ALAVSGKFTLPGQRIDAVGTVAGTSFLSDKTAPRPTGLSLPFAGQPVQGFSGIETLKDGT EEEEECEEECCCCCCCCEEHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC FRVITDNGFGAKANSADAMLMVHTLRPDWASGVLSRLSTTFLADPDRKLPFVIVNEGTET EEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCE RYLTGADLDIESVQQIGEDLWFGEEFGPYLLRTDRAGKVTGFFQTEVDGKVVHSPDHLAV EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEECCCCEEE ATPAVPGKVSFEIRRSRGFEGMAASPDGRFLYPLLEGPLWIDATQTWETKDGKEVLRILE ECCCCCCEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCEEEECCCCCCCCCHHHHHHHHH FDVQKQAWSGRSWKYALEANGNNIGDFNMIDGETGLIIERDNGEGEAAQACPAEPKPECF HHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCEEEEECCCCCCCHHHCCCCCCCCCCC NIPARFKRVYKIDLSQADGEGVVKKIGYIDLLDIDDPKGLAHQGGHDGKLTFPFVTIENV CCCHHHEEEEEEECCCCCCCCHHHHCCEEEEEECCCCCCHHHCCCCCCEEEEEEEEECCE DIVDADHIIVGNDNNLPYSTGRAIGRNDDNEMILLKVSDFLKAR EEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA