Click here to switch to the map view.

The map label for this gene is 83593055

Identifier: 83593055

GI number: 83593055

Start: 2013986

End: 2014300

Strand: Direct

Name: 83593055

Synonym: Rru_A1720

Alternate gene names: NA

Gene position: 2013986-2014300 (Clockwise)

Preceding gene: 83593054

Following gene: 83593056

Centisome position: 46.27

GC content: 65.08

Gene sequence:

>315_bases
ATGGCGGTTTCAAAGGCTTTCGAGAGGTTTTTCGCCGAGGCGCCCGGCCATGCCAAGGCCTGGATGGCGGCGGTTCAGGG
GCTTGATCAGGCGAGCGGGCTTGATAAGAAGACCGAGGAACTGGCCTATCTTGGCGTTCTGGCGGCGGCGCGCCTGCCCT
CGGGCATCGCTTTTCATGTCCAATCGGCCAAGGCGGCCGGGGCGACCCGGGAAGAGATCATCGGCGCCGTGCTGATCGGC
CTGCCCGCCGTTGGCGCCGGCGTGATCGAAGCCCTGCCGATCGCTTTGGACGCCTATGACCAGAGCGGACAATGA

Upstream 100 bases:

>100_bases
CTGACTCTTCCCTCAATTTTCGCTAAGCTCGTTGGATCGATCGTCCGTGGCGCCAGAGAAACGACGGTGCTCGGACCCAA
TCCGTCTTGCGGGGAATATC

Downstream 100 bases:

>100_bases
CCACCGCCCTGCTGATCATCGACGTGCAATGTGCGATCCTCGCCGGCCTCGCCCCGCCCGAGCGCCAGCCGGTGATCGAC
CTGGCCCTGGACGACACCGT

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: Carboxymuconolactone Decarboxylase Family Protein

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MAVSKAFERFFAEAPGHAKAWMAAVQGLDQASGLDKKTEELAYLGVLAAARLPSGIAFHVQSAKAAGATREEIIGAVLIG
LPAVGAGVIEALPIALDAYDQSGQ

Sequences:

>Translated_104_residues
MAVSKAFERFFAEAPGHAKAWMAAVQGLDQASGLDKKTEELAYLGVLAAARLPSGIAFHVQSAKAAGATREEIIGAVLIG
LPAVGAGVIEALPIALDAYDQSGQ
>Mature_103_residues
AVSKAFERFFAEAPGHAKAWMAAVQGLDQASGLDKKTEELAYLGVLAAARLPSGIAFHVQSAKAAGATREEIIGAVLIGL
PAVGAGVIEALPIALDAYDQSGQ

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10634; Mature: 10503

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSKAFERFFAEAPGHAKAWMAAVQGLDQASGLDKKTEELAYLGVLAAARLPSGIAFHV
CCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
QSAKAAGATREEIIGAVLIGLPAVGAGVIEALPIALDAYDQSGQ
CCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AVSKAFERFFAEAPGHAKAWMAAVQGLDQASGLDKKTEELAYLGVLAAARLPSGIAFHV
CHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
QSAKAAGATREEIIGAVLIGLPAVGAGVIEALPIALDAYDQSGQ
CCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA