Click here to switch to the map view.

The map label for this gene is 83593050

Identifier: 83593050

GI number: 83593050

Start: 2007706

End: 2008143

Strand: Reverse

Name: 83593050

Synonym: Rru_A1715

Alternate gene names: NA

Gene position: 2008143-2007706 (Counterclockwise)

Preceding gene: 83593051

Following gene: 83593048

Centisome position: 46.13

GC content: 68.95

Gene sequence:

>438_bases
ATGAGCACCAGAACCGCTTTGCTCCGTCTGGCGCTTGGCCTGCTGGCCGGCGGCCTGTTCGGCTTCGGCCTGGCGCTTTC
GGGCATGATCGATCCGGCCCGGGTTCTCGGCTTCCTCACCCTGGGAAGCGGCGCCTGGGACCCCAGCTTGATGTTCGTTC
TGGGCGGCGCGGTCGGCGTGGCGACCTTGGGCGTGGGGGTAGGGCGGCGCCTGAGCCGTCCGGCCTTTGACGATCACTTC
GCCCTGCCGCCGACAACCGGCATAACCCGCCGGCTGCTGCTTGGCGCGGCGCTGTTTGGCATCGGCTGGGGGCTGGCCGG
TTTCTGCCCCGGTCCGGCGATCGCCGGGCTGAGCCTGGGTTTGGCGCCCGTCGCCATTTTCGTCGGGGCGATGGCGATTG
GCATGATCGTTCACGACCGCTTTTTCGCCCGGCGATAA

Upstream 100 bases:

>100_bases
GGATTGTCGGTCTGGCCCGCCTGTCGCGGCGCTCCCTGGCCGCCACCGCGACCTTCCTGGTCTGCGGCGTTTTGACCGCC
TCGCTGATGGGGATCTTGCG

Downstream 100 bases:

>100_bases
GCGATGCTTTAGCTTGTCTCCAGTCCAGGGATCTGGCCGATCCTTTCGACCAGGAAATCAACCAGCAAGCGAACGCGGGC
GATCGCCGCCCGCTCGGGAA

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSTRTALLRLALGLLAGGLFGFGLALSGMIDPARVLGFLTLGSGAWDPSLMFVLGGAVGVATLGVGVGRRLSRPAFDDHF
ALPPTTGITRRLLLGAALFGIGWGLAGFCPGPAIAGLSLGLAPVAIFVGAMAIGMIVHDRFFARR

Sequences:

>Translated_145_residues
MSTRTALLRLALGLLAGGLFGFGLALSGMIDPARVLGFLTLGSGAWDPSLMFVLGGAVGVATLGVGVGRRLSRPAFDDHF
ALPPTTGITRRLLLGAALFGIGWGLAGFCPGPAIAGLSLGLAPVAIFVGAMAIGMIVHDRFFARR
>Mature_144_residues
STRTALLRLALGLLAGGLFGFGLALSGMIDPARVLGFLTLGSGAWDPSLMFVLGGAVGVATLGVGVGRRLSRPAFDDHFA
LPPTTGITRRLLLGAALFGIGWGLAGFCPGPAIAGLSLGLAPVAIFVGAMAIGMIVHDRFFARR

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 14762; Mature: 14631

Theoretical pI: Translated: 12.26; Mature: 12.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRTALLRLALGLLAGGLFGFGLALSGMIDPARVLGFLTLGSGAWDPSLMFVLGGAVGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ATLGVGVGRRLSRPAFDDHFALPPTTGITRRLLLGAALFGIGWGLAGFCPGPAIAGLSLG
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LAPVAIFVGAMAIGMIVHDRFFARR
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STRTALLRLALGLLAGGLFGFGLALSGMIDPARVLGFLTLGSGAWDPSLMFVLGGAVGV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ATLGVGVGRRLSRPAFDDHFALPPTTGITRRLLLGAALFGIGWGLAGFCPGPAIAGLSLG
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LAPVAIFVGAMAIGMIVHDRFFARR
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]