| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593042
Identifier: 83593042
GI number: 83593042
Start: 1999261
End: 1999929
Strand: Reverse
Name: 83593042
Synonym: Rru_A1707
Alternate gene names: NA
Gene position: 1999929-1999261 (Counterclockwise)
Preceding gene: 83593043
Following gene: 83593041
Centisome position: 45.95
GC content: 59.04
Gene sequence:
>669_bases ATGGACGTATTCGAGAAGGAGACCATCGCTCGTCTTCCACGGCTCGCGCCACCCCGCCCAGTTTGTCTTTCCCGCTTCGC GCAGTTCCCGCCAGAGTCGCTCCGCGAGTTCATCATCGGGATCGGCGCATATTTCGGCGGCACGAGCACGCTCAGCAATC AACGTTACATCTTCTTCCCGGATCGAACCGAGCAGGACGACGCCGGGTACCGACATCGCTTCTTTAAGCAAGACACCCCA GCTTTCCGGTCCATTTCGGCCAATGTCATCCATGACGAAGCCCAAGGGACTGTCTTCCGAGGCGCGGAACGTGCGGATCA ACTGGCGCAGAGATGGAATATCCGCCGCGCTCAGACGACGAATTCGAAACCACCGCACCGTATGGCGCAATATATTAGCG GTTTCCCACATCAAAGCGGATTTGCCGGCCCCAGACGGGCCGACGATCAACGCGGCCCGACGTTGTTCAATGCCTTCCAT CAATGCCGATCTGCTTCGGGGCCGCTCGGATACCAGTCCCGCCGCAATGTGGCCGGGTTCTACATCAACCCCGAGATAGA AGTTCGGGTCATTGAGGGGGGTGAGGAAATCGACCGGTTCGCAGACACCATCCCTGAGGGCGTGTTCGATCGCGTCAACG TCGATAGCGGCCAAGACATCGCGGATTGA
Upstream 100 bases:
>100_bases ATCGCAAAATATCGAGTTCAAGGGAACGCTTCGGATCCGAAATCCTGGCCGCAACCTGATCGGCGAGGAGTTCGTGCATT CGTTGTCCGCGTGTTAAGAT
Downstream 100 bases:
>100_bases GATTTCCGTGTCAGAGATCGAAAGGCCACGATAGTTCTCGGACGCCAACCGGCCGTTGGCGTCGGCCAAGGTGCCTACGC GAATAAGAAGTTCGGCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MDVFEKETIARLPRLAPPRPVCLSRFAQFPPESLREFIIGIGAYFGGTSTLSNQRYIFFPDRTEQDDAGYRHRFFKQDTP AFRSISANVIHDEAQGTVFRGAERADQLAQRWNIRRAQTTNSKPPHRMAQYISGFPHQSGFAGPRRADDQRGPTLFNAFH QCRSASGPLGYQSRRNVAGFYINPEIEVRVIEGGEEIDRFADTIPEGVFDRVNVDSGQDIAD
Sequences:
>Translated_222_residues MDVFEKETIARLPRLAPPRPVCLSRFAQFPPESLREFIIGIGAYFGGTSTLSNQRYIFFPDRTEQDDAGYRHRFFKQDTP AFRSISANVIHDEAQGTVFRGAERADQLAQRWNIRRAQTTNSKPPHRMAQYISGFPHQSGFAGPRRADDQRGPTLFNAFH QCRSASGPLGYQSRRNVAGFYINPEIEVRVIEGGEEIDRFADTIPEGVFDRVNVDSGQDIAD >Mature_222_residues MDVFEKETIARLPRLAPPRPVCLSRFAQFPPESLREFIIGIGAYFGGTSTLSNQRYIFFPDRTEQDDAGYRHRFFKQDTP AFRSISANVIHDEAQGTVFRGAERADQLAQRWNIRRAQTTNSKPPHRMAQYISGFPHQSGFAGPRRADDQRGPTLFNAFH QCRSASGPLGYQSRRNVAGFYINPEIEVRVIEGGEEIDRFADTIPEGVFDRVNVDSGQDIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25127; Mature: 25127
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVFEKETIARLPRLAPPRPVCLSRFAQFPPESLREFIIGIGAYFGGTSTLSNQRYIFFP CCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECC DRTEQDDAGYRHRFFKQDTPAFRSISANVIHDEAQGTVFRGAERADQLAQRWNIRRAQTT CCCCCCCCHHHHHHHCCCCCHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHCCC NSKPPHRMAQYISGFPHQSGFAGPRRADDQRGPTLFNAFHQCRSASGPLGYQSRRNVAGF CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEE YINPEIEVRVIEGGEEIDRFADTIPEGVFDRVNVDSGQDIAD EECCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDVFEKETIARLPRLAPPRPVCLSRFAQFPPESLREFIIGIGAYFGGTSTLSNQRYIFFP CCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECC DRTEQDDAGYRHRFFKQDTPAFRSISANVIHDEAQGTVFRGAERADQLAQRWNIRRAQTT CCCCCCCCHHHHHHHCCCCCHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHCCC NSKPPHRMAQYISGFPHQSGFAGPRRADDQRGPTLFNAFHQCRSASGPLGYQSRRNVAGF CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEE YINPEIEVRVIEGGEEIDRFADTIPEGVFDRVNVDSGQDIAD EECCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA