| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is mltB [H]
Identifier: 83593041
GI number: 83593041
Start: 1996760
End: 1998124
Strand: Reverse
Name: mltB [H]
Synonym: Rru_A1706
Alternate gene names: 83593041
Gene position: 1998124-1996760 (Counterclockwise)
Preceding gene: 83593042
Following gene: 83593040
Centisome position: 45.9
GC content: 71.14
Gene sequence:
>1365_bases ATGGCACGTCTTGGATCCCCTTATAAAAAGCAAAAGAGTGTCCCCATGGCCCGTCGCCCCTTCGCCCTGGCCGCCCTGCC GGTGGTTCTTCTCGCCCTGTCCAGTTGCGCCGGCGCCGACCAAAGCCAGCGCTCGGGCGGGACCGGCGGCGGGCGATCGG CGCCGGGGATGGCGCCGGTGTCGCCCATCGCCCCAGCGGCGGCGCTCAGTCCGGCCGCCGAACAGGCCGCCTTCGCCCAA TGGCTGGTCGGCATGCGGGCCGAGGCCCTGGCGGCGGGCATCAGCCGCGCCACCGTCGACAGCGCCTTGGGCCGGGCGCG GATCGAGCCGCGCATCGTCGAGCTTGATCGCAAGCAGCCCGAATTCAACAAGACCCTGGCGGGCTATTTCGCCTCGACCC TGCCCGACAGCCGCATCGCCAAAGCCCGCGAGATGATGGCGCTGCACGCGCCGTTGCTGCGCTCGCTTGAACAACGCTAT GGCGTGCCGGGGCGCTTCCTGGTCGCTTTCTGGGGGTTGGAAACCAATTTCGGCGGCACGCTCGGCTCGTTCCGCGTCGT CGACGCGCTGTCCACCCTGGCCTTCGAGGGCCGGCGCGGCGCCTTCTTCCGGGCCCAGTTGCTTGACGCCTTGCGCATCA TCGACGCCGGCCATGTCAGCGCCGACGCCATGATCGGCTCGTGGGCCGGGGCGATGGGCCAAACCCAGTTCATGCCCTCG ACCTTCCGCGCCCATGCGGTCGATTACGATGGCGACGGCCGCATCGACATCTGGGGCAGCCTGCCCGACGCCCTGGCCTC GGCGGCGAAATACCTGTCCGATCTGGGCTGGAAGGGCGCCGAGCCCTGGGGGTGGGAGGTGGTGCTGCCCGCCGGGCTGG ATCTGGCGCGGGTCGGCCTGGAAGAACGCCGGCCTTTGGCCGATTGGGCGGCGCTCGGCTTGCGCGGCGCCGATGGCCGG GCGCTGGGGGCGGGGGCCAGAGCCGGGGTGACGGCCGCCCTGCTGCTGCCGGCGGGCTATCGCGGCCCGGCCTTCCTGGT CACCGACAACTATTTCTCTATCCTCAAATGGAACCGCTCGATGCTCTATGCCCTGGCCGTCGGGCTCTTGGCCGATCGGG CGGCGGGCGGCGGGCCGCTGGTCCATCCGCCGCCGGCCGACGAGGCGCCACTGCGCAGCGCCGATGTCGCCGAGATCCAA AGCCGCCTGTCCGCCCTGGGCTATGACGCCGGCACGGCCGATGGCGTGATCGGCGCCCAGACCCGGGTCGCCATCCGCGC CTATCAAGCTTCGATCGGCGCCCCGGCCGATGGCTATGCCAATGACGCCCTGCTCGCCGATCTGCGCCGGCGGAGTGGCC GATGA
Upstream 100 bases:
>100_bases AGGGGGACGGGGAGGGGTGTCAACGGGGGGTTCTTGGGGGAGGGGGCTTTGGGCGGGATCGCGGTTTCCTTGCCCATGGG TTGGACATTGCCGGTGGTTT
Downstream 100 bases:
>100_bases GCGTGAAGAGTTGGCGCGGCGGGCGAAGCTGGCGGGCGCCGCTTGGTCTCTTGCTGATCAGCGCCGCCGCCCTCGCCCTG TCGGGCTGCGCCGAAACCGG
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MARLGSPYKKQKSVPMARRPFALAALPVVLLALSSCAGADQSQRSGGTGGGRSAPGMAPVSPIAPAAALSPAAEQAAFAQ WLVGMRAEALAAGISRATVDSALGRARIEPRIVELDRKQPEFNKTLAGYFASTLPDSRIAKAREMMALHAPLLRSLEQRY GVPGRFLVAFWGLETNFGGTLGSFRVVDALSTLAFEGRRGAFFRAQLLDALRIIDAGHVSADAMIGSWAGAMGQTQFMPS TFRAHAVDYDGDGRIDIWGSLPDALASAAKYLSDLGWKGAEPWGWEVVLPAGLDLARVGLEERRPLADWAALGLRGADGR ALGAGARAGVTAALLLPAGYRGPAFLVTDNYFSILKWNRSMLYALAVGLLADRAAGGGPLVHPPPADEAPLRSADVAEIQ SRLSALGYDAGTADGVIGAQTRVAIRAYQASIGAPADGYANDALLADLRRRSGR
Sequences:
>Translated_454_residues MARLGSPYKKQKSVPMARRPFALAALPVVLLALSSCAGADQSQRSGGTGGGRSAPGMAPVSPIAPAAALSPAAEQAAFAQ WLVGMRAEALAAGISRATVDSALGRARIEPRIVELDRKQPEFNKTLAGYFASTLPDSRIAKAREMMALHAPLLRSLEQRY GVPGRFLVAFWGLETNFGGTLGSFRVVDALSTLAFEGRRGAFFRAQLLDALRIIDAGHVSADAMIGSWAGAMGQTQFMPS TFRAHAVDYDGDGRIDIWGSLPDALASAAKYLSDLGWKGAEPWGWEVVLPAGLDLARVGLEERRPLADWAALGLRGADGR ALGAGARAGVTAALLLPAGYRGPAFLVTDNYFSILKWNRSMLYALAVGLLADRAAGGGPLVHPPPADEAPLRSADVAEIQ SRLSALGYDAGTADGVIGAQTRVAIRAYQASIGAPADGYANDALLADLRRRSGR >Mature_453_residues ARLGSPYKKQKSVPMARRPFALAALPVVLLALSSCAGADQSQRSGGTGGGRSAPGMAPVSPIAPAAALSPAAEQAAFAQW LVGMRAEALAAGISRATVDSALGRARIEPRIVELDRKQPEFNKTLAGYFASTLPDSRIAKAREMMALHAPLLRSLEQRYG VPGRFLVAFWGLETNFGGTLGSFRVVDALSTLAFEGRRGAFFRAQLLDALRIIDAGHVSADAMIGSWAGAMGQTQFMPST FRAHAVDYDGDGRIDIWGSLPDALASAAKYLSDLGWKGAEPWGWEVVLPAGLDLARVGLEERRPLADWAALGLRGADGRA LGAGARAGVTAALLLPAGYRGPAFLVTDNYFSILKWNRSMLYALAVGLLADRAAGGGPLVHPPPADEAPLRSADVAEIQS RLSALGYDAGTADGVIGAQTRVAIRAYQASIGAPADGYANDALLADLRRRSGR
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=221, Percent_Identity=33.0316742081448, Blast_Score=100, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 47615; Mature: 47484
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLGSPYKKQKSVPMARRPFALAALPVVLLALSSCAGADQSQRSGGTGGGRSAPGMAPV CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCC SPIAPAAALSPAAEQAAFAQWLVGMRAEALAAGISRATVDSALGRARIEPRIVELDRKQP CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC EFNKTLAGYFASTLPDSRIAKAREMMALHAPLLRSLEQRYGVPGRFLVAFWGLETNFGGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC LGSFRVVDALSTLAFEGRRGAFFRAQLLDALRIIDAGHVSADAMIGSWAGAMGQTQFMPS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC TFRAHAVDYDGDGRIDIWGSLPDALASAAKYLSDLGWKGAEPWGWEVVLPAGLDLARVGL HHHHEEECCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCH EERRPLADWAALGLRGADGRALGAGARAGVTAALLLPAGYRGPAFLVTDNYFSILKWNRS HHCCCHHHHHHHCCCCCCCCEECCCCHHCCEEEEEECCCCCCCEEEEECCCHHHHHHHHH MLYALAVGLLADRAAGGGPLVHPPPADEAPLRSADVAEIQSRLSALGYDAGTADGVIGAQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH TRVAIRAYQASIGAPADGYANDALLADLRRRSGR HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure ARLGSPYKKQKSVPMARRPFALAALPVVLLALSSCAGADQSQRSGGTGGGRSAPGMAPV CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCC SPIAPAAALSPAAEQAAFAQWLVGMRAEALAAGISRATVDSALGRARIEPRIVELDRKQP CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC EFNKTLAGYFASTLPDSRIAKAREMMALHAPLLRSLEQRYGVPGRFLVAFWGLETNFGGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC LGSFRVVDALSTLAFEGRRGAFFRAQLLDALRIIDAGHVSADAMIGSWAGAMGQTQFMPS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC TFRAHAVDYDGDGRIDIWGSLPDALASAAKYLSDLGWKGAEPWGWEVVLPAGLDLARVGL HHHHEEECCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHCH EERRPLADWAALGLRGADGRALGAGARAGVTAALLLPAGYRGPAFLVTDNYFSILKWNRS HHCCCHHHHHHHCCCCCCCCEECCCCHHCCEEEEEECCCCCCCEEEEECCCHHHHHHHHH MLYALAVGLLADRAAGGGPLVHPPPADEAPLRSADVAEIQSRLSALGYDAGTADGVIGAQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH TRVAIRAYQASIGAPADGYANDALLADLRRRSGR HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]