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The map label for this gene is 83592997

Identifier: 83592997

GI number: 83592997

Start: 1954240

End: 1954707

Strand: Reverse

Name: 83592997

Synonym: Rru_A1662

Alternate gene names: NA

Gene position: 1954707-1954240 (Counterclockwise)

Preceding gene: 83593007

Following gene: 83592996

Centisome position: 44.91

GC content: 58.97

Gene sequence:

>468_bases
ATGCAGACATTCGTTCCCGTCATACGGCGAAGCACCAGGCTGACGGGCGCCTTGTTGGGGACTCTTCTGCTCTGCGCCGG
ATGTTCCAACGATATCAATCCCCACGGCAATTTGCCGACCACCGAGGCTTTGGGGCAGATTCAGGAAGGGGTGCATACGC
GCACCGATATCCAGGCCCTGCTCGGCACCCCCTCGGCCACCTCGATGTTTGGCGGCGAGACGTGGTTTTATATCAGCAAT
GAAACCACCCAGGTCGCCTTCTTCAAGCCCAAGGAATTGGAACGGACCATCATCGCCGTGCATTTCGACGACAACGGCCG
GGTCAAGGGCATAGACCATCTGTCCAAGGACGACGGCCAGCAGGTGGATATCGTCGGCCGCGAAACGCCAACGCGGGGCA
ACGACTCCTCCATCGTTCAGGAATTGTTTGGCAATATCGGCCGCTTCGCTCCCAAGACGGTGGACTGA

Upstream 100 bases:

>100_bases
GATCCCTTCCGTTCCTCGGCCTCAGGCTGTAGGATGCGCCCGGCCGTCCCGCCCGCGCGGGGCGGTCCGTCACCAATCGG
GCGCCAAGGAGAGGCCGTTC

Downstream 100 bases:

>100_bases
CCCCCTTTTTGGCCGCCGGCGGCCTTTGGGAGGTCGCCGATGCGGGCAGGGTACGCGGTTTTGCTGGGGGTCTTGGCGCT
GATCGGCACGGTGGTTCCCC

Product: smpA/OmlA

Products: NA

Alternate protein names: Lipoprotein SmpA/OmlA Family; SmpA/OmlA Domain Protein; SmpA/OmlA; Small Protein A; Outer Membrane Protein; SmpA/OmlA Family Lipoprotein; SmAll Protein A; SmpA Protein; SmpA / OmlA Family; SmpA/OmlA Family Protein; Lipoprotein SmpA/OmlA; Lipoprotein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MQTFVPVIRRSTRLTGALLGTLLLCAGCSNDINPHGNLPTTEALGQIQEGVHTRTDIQALLGTPSATSMFGGETWFYISN
ETTQVAFFKPKELERTIIAVHFDDNGRVKGIDHLSKDDGQQVDIVGRETPTRGNDSSIVQELFGNIGRFAPKTVD

Sequences:

>Translated_155_residues
MQTFVPVIRRSTRLTGALLGTLLLCAGCSNDINPHGNLPTTEALGQIQEGVHTRTDIQALLGTPSATSMFGGETWFYISN
ETTQVAFFKPKELERTIIAVHFDDNGRVKGIDHLSKDDGQQVDIVGRETPTRGNDSSIVQELFGNIGRFAPKTVD
>Mature_155_residues
MQTFVPVIRRSTRLTGALLGTLLLCAGCSNDINPHGNLPTTEALGQIQEGVHTRTDIQALLGTPSATSMFGGETWFYISN
ETTQVAFFKPKELERTIIAVHFDDNGRVKGIDHLSKDDGQQVDIVGRETPTRGNDSSIVQELFGNIGRFAPKTVD

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16900; Mature: 16900

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTFVPVIRRSTRLTGALLGTLLLCAGCSNDINPHGNLPTTEALGQIQEGVHTRTDIQAL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
LGTPSATSMFGGETWFYISNETTQVAFFKPKELERTIIAVHFDDNGRVKGIDHLSKDDGQ
HCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCEECCCCCCCCCCC
QVDIVGRETPTRGNDSSIVQELFGNIGRFAPKTVD
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQTFVPVIRRSTRLTGALLGTLLLCAGCSNDINPHGNLPTTEALGQIQEGVHTRTDIQAL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
LGTPSATSMFGGETWFYISNETTQVAFFKPKELERTIIAVHFDDNGRVKGIDHLSKDDGQ
HCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCEECCCCCCCCCCC
QVDIVGRETPTRGNDSSIVQELFGNIGRFAPKTVD
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA