| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593007
Identifier: 83593007
GI number: 83593007
Start: 1962490
End: 1962810
Strand: Reverse
Name: 83593007
Synonym: Rru_A1672
Alternate gene names: NA
Gene position: 1962810-1962490 (Counterclockwise)
Preceding gene: 83593009
Following gene: 83592997
Centisome position: 45.09
GC content: 67.6
Gene sequence:
>321_bases ATGACGGGGGCAAGCATGGCGGGCGCGGCGACTTCGAAGCGAAAGACGGCCAAACAACCCGGCCTTGGCCGACCAAGCGC CCCGCAGCGGCGCTGGCTGGAACGCGGGTTGACCCAGGCGGGGGGAAAATTGCCGCTGTTTGACGATCAGGGGCGGCGAG TTGACGGCCGCATCATCCGCATCTGCCTGGAGCGCGGATGGGTCGAGCCGTGGTTTGCCAATCCGTTGAAGCCGAATTGG CTGGTCTGCAAATTGACCGACGCCGGACGCGCCGCCCTCGCCCGCTCCGGCAAAGCCGCCGTCACGCCAAGGACCGCCTG A
Upstream 100 bases:
>100_bases GATTGGGGCATGGGGGCTTCCTCGCGCTCTTCGTCCTTTCCCGGGAGAAAAACCATTTTTCCAGGGAACCCTTCGCAAGG CCCGACTTTGGGGGAACACG
Downstream 100 bases:
>100_bases CCTCCGGCCTTGCGGGGGTGGCGGAGCCGCGGCGCCAGACGTCGAAGATCAGCCGGGCGGCCTGAAGAGCGCCGCTTGGC GCCACCGGCGCCGGCCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTGASMAGAATSKRKTAKQPGLGRPSAPQRRWLERGLTQAGGKLPLFDDQGRRVDGRIIRICLERGWVEPWFANPLKPNW LVCKLTDAGRAALARSGKAAVTPRTA
Sequences:
>Translated_106_residues MTGASMAGAATSKRKTAKQPGLGRPSAPQRRWLERGLTQAGGKLPLFDDQGRRVDGRIIRICLERGWVEPWFANPLKPNW LVCKLTDAGRAALARSGKAAVTPRTA >Mature_105_residues TGASMAGAATSKRKTAKQPGLGRPSAPQRRWLERGLTQAGGKLPLFDDQGRRVDGRIIRICLERGWVEPWFANPLKPNWL VCKLTDAGRAALARSGKAAVTPRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11493; Mature: 11362
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGASMAGAATSKRKTAKQPGLGRPSAPQRRWLERGLTQAGGKLPLFDDQGRRVDGRIIR CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHH ICLERGWVEPWFANPLKPNWLVCKLTDAGRAALARSGKAAVTPRTA HHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure TGASMAGAATSKRKTAKQPGLGRPSAPQRRWLERGLTQAGGKLPLFDDQGRRVDGRIIR CCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHH ICLERGWVEPWFANPLKPNWLVCKLTDAGRAALARSGKAAVTPRTA HHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA