| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592955
Identifier: 83592955
GI number: 83592955
Start: 1912788
End: 1913303
Strand: Direct
Name: 83592955
Synonym: Rru_A1620
Alternate gene names: NA
Gene position: 1912788-1913303 (Clockwise)
Preceding gene: 83592954
Following gene: 83592957
Centisome position: 43.94
GC content: 63.57
Gene sequence:
>516_bases ATGGGGCCTTACGGTATCTGGTCAACCTTGACGGCGGTGGTCACGCTTGTCGTGATGAATGGATCGCCAACCTGGGCGGA AGAGGCCATGGCGTTCTCGCCGGCCGAGCAATCGCAGGCGGTCGGCGCTCCGGCTTCGGCCCCCCGGCTGGGCTCTCTCA CCCTGTCGATTTCCGGGCTGCGCTCGGATAAGGGAACGGTTCATGTGGCGCTTTATGATAGTCCCGACCATTTTCCGGCC AATGACGGAATGGTCAGCGTGCTGTCGATCCACCCCGCGAACCAGCGGGCCGAGGCGATCTTTGACGCCCTGCCGGCCGG GCATTATGCCATCGCCTTTTACCATGACGAAAACGCCAATGGCGTCTTCGATCGCGGCCTGCTGGGTGTTCCCTTGGAGG GCTTCGGGTTTTCGCGCGATGCCCGGGTGACCCTGAAGCCCCCCAGTTTTTCCGACGCCGCCCTGGGGTTGGAGGCCGGC CAGCAGCGGGCCATCGAAGCCAAGATGCGGTATTAG
Upstream 100 bases:
>100_bases CGCGGGGGCGACCTTGCGAGAGGGCGGGGGCGATGTTAAGTAAGGATTAAGTCCTTCCTTAATAAGGAAAACTTGGAAAG AGATCGAGGATTTCGTTTTG
Downstream 100 bases:
>100_bases ATTAGGGCAAGTCCCGACCGGTCTTCAGCTCTCGGCCTCGTCAAGGGCGGGGATATGGGCCAGGGCGTCGATCAGCACCT GGGCCGTGGCATCGGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MGPYGIWSTLTAVVTLVVMNGSPTWAEEAMAFSPAEQSQAVGAPASAPRLGSLTLSISGLRSDKGTVHVALYDSPDHFPA NDGMVSVLSIHPANQRAEAIFDALPAGHYAIAFYHDENANGVFDRGLLGVPLEGFGFSRDARVTLKPPSFSDAALGLEAG QQRAIEAKMRY
Sequences:
>Translated_171_residues MGPYGIWSTLTAVVTLVVMNGSPTWAEEAMAFSPAEQSQAVGAPASAPRLGSLTLSISGLRSDKGTVHVALYDSPDHFPA NDGMVSVLSIHPANQRAEAIFDALPAGHYAIAFYHDENANGVFDRGLLGVPLEGFGFSRDARVTLKPPSFSDAALGLEAG QQRAIEAKMRY >Mature_170_residues GPYGIWSTLTAVVTLVVMNGSPTWAEEAMAFSPAEQSQAVGAPASAPRLGSLTLSISGLRSDKGTVHVALYDSPDHFPAN DGMVSVLSIHPANQRAEAIFDALPAGHYAIAFYHDENANGVFDRGLLGVPLEGFGFSRDARVTLKPPSFSDAALGLEAGQ QRAIEAKMRY
Specific function: Unknown
COG id: COG4704
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18075; Mature: 17943
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPYGIWSTLTAVVTLVVMNGSPTWAEEAMAFSPAEQSQAVGAPASAPRLGSLTLSISGL CCCHHHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEEEECC RSDKGTVHVALYDSPDHFPANDGMVSVLSIHPANQRAEAIFDALPAGHYAIAFYHDENAN CCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCC GVFDRGLLGVPLEGFGFSRDARVTLKPPSFSDAALGLEAGQQRAIEAKMRY CCCCCCEECCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCEEEEECCC >Mature Secondary Structure GPYGIWSTLTAVVTLVVMNGSPTWAEEAMAFSPAEQSQAVGAPASAPRLGSLTLSISGL CCHHHHHHHHHHHEEEEECCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEEEECC RSDKGTVHVALYDSPDHFPANDGMVSVLSIHPANQRAEAIFDALPAGHYAIAFYHDENAN CCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCC GVFDRGLLGVPLEGFGFSRDARVTLKPPSFSDAALGLEAGQQRAIEAKMRY CCCCCCEECCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA