| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592954
Identifier: 83592954
GI number: 83592954
Start: 1912054
End: 1912578
Strand: Direct
Name: 83592954
Synonym: Rru_A1619
Alternate gene names: NA
Gene position: 1912054-1912578 (Clockwise)
Preceding gene: 83592952
Following gene: 83592955
Centisome position: 43.93
GC content: 62.67
Gene sequence:
>525_bases ATGGGGGCTTCGATCAGAGGAAAGGCTCGTTCCTTGACGCGCAGTGATCGAAAGCCCGCAGACCTTCCATTATCGGCTTT TTTTTCAGAAATGGGCGATTTTGTTATCATTGATCGAAAATTCGGCTTTTTCAATCGGCCCGAAATCAGTATCCCAAGCC GGCATTCTGTCTTATGCAAGACCGGAGACATCCGGGGCGCCCCCGGCGGCGCTCCATACTTGTCTCTGTTTCGGAGGCGC CATGATCGACGCGTCCTCCTTGCCCAAGGATATCTGGCTATGAGCGCGCCGTCCGACCCGCCCTTTGATTCCAAAACCGC CGCCGCCGTGGTGCTGGCCGGCAAGCGCGCCCAGGGGGGCGAGCGTCCGCCGCTGCGCCCCGGCGACCGCCGCTGCCAGC GCTGCGGCGCGACCTTTCGCTGGGATCGCTCCAGCCATGGCGACGGCTGGGTGATGCGTCTGGTCGGGGGATCGCAGCGC TGCGATTGCGGGTATGGCAAGCGCGGCGGTCCCGATGCCGATTAG
Upstream 100 bases:
>100_bases CAAGATCCACACTTTCTATCCCTTTTCTTTTAGAGGTTTCCCCGCGATCCACAGTCCTTTGATGACGGTGACGTTTTTTT GGCCGATGTCTGGAGCGACG
Downstream 100 bases:
>100_bases GCCGACTTCTTTGGCGATCCGCGGCCAAATGCGGAAGATATTTTTCAATATCAATTGCTTAGGGATGAATATGTAAAGTT TTGTTTACGCGTGCCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MGASIRGKARSLTRSDRKPADLPLSAFFSEMGDFVIIDRKFGFFNRPEISIPSRHSVLCKTGDIRGAPGGAPYLSLFRRR HDRRVLLAQGYLAMSAPSDPPFDSKTAAAVVLAGKRAQGGERPPLRPGDRRCQRCGATFRWDRSSHGDGWVMRLVGGSQR CDCGYGKRGGPDAD
Sequences:
>Translated_174_residues MGASIRGKARSLTRSDRKPADLPLSAFFSEMGDFVIIDRKFGFFNRPEISIPSRHSVLCKTGDIRGAPGGAPYLSLFRRR HDRRVLLAQGYLAMSAPSDPPFDSKTAAAVVLAGKRAQGGERPPLRPGDRRCQRCGATFRWDRSSHGDGWVMRLVGGSQR CDCGYGKRGGPDAD >Mature_173_residues GASIRGKARSLTRSDRKPADLPLSAFFSEMGDFVIIDRKFGFFNRPEISIPSRHSVLCKTGDIRGAPGGAPYLSLFRRRH DRRVLLAQGYLAMSAPSDPPFDSKTAAAVVLAGKRAQGGERPPLRPGDRRCQRCGATFRWDRSSHGDGWVMRLVGGSQRC DCGYGKRGGPDAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19024; Mature: 18893
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASIRGKARSLTRSDRKPADLPLSAFFSEMGDFVIIDRKFGFFNRPEISIPSRHSVLCK CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEE TGDIRGAPGGAPYLSLFRRRHDRRVLLAQGYLAMSAPSDPPFDSKTAAAVVLAGKRAQGG CCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCCCCEEEEEEECCCCCCC ERPPLRPGDRRCQRCGATFRWDRSSHGDGWVMRLVGGSQRCDCGYGKRGGPDAD CCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GASIRGKARSLTRSDRKPADLPLSAFFSEMGDFVIIDRKFGFFNRPEISIPSRHSVLCK CCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEE TGDIRGAPGGAPYLSLFRRRHDRRVLLAQGYLAMSAPSDPPFDSKTAAAVVLAGKRAQGG CCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCCCCEEEEEEECCCCCCC ERPPLRPGDRRCQRCGATFRWDRSSHGDGWVMRLVGGSQRCDCGYGKRGGPDAD CCCCCCCHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA