| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592952
Identifier: 83592952
GI number: 83592952
Start: 1910734
End: 1911645
Strand: Direct
Name: 83592952
Synonym: Rru_A1617
Alternate gene names: NA
Gene position: 1910734-1911645 (Clockwise)
Preceding gene: 83592949
Following gene: 83592954
Centisome position: 43.9
GC content: 68.2
Gene sequence:
>912_bases ATGATCGGTGCCATGCCTTCGCCTTGTATCGGAATTTGCAAGATGACGGACGACGGATCGCTCTGCGTCGGCTGCGCCCG CACCGCCGAGGAGATCGCCCAGTGGTCGGCCCTTGAGGGCGACGCCAAGTTGACGGTCTTTCGCGATCTTCCCCGCCGGC GCGCGGAGAGCGGCCTGGGCTTTCCGGTTCTTGGCCATCCGGTGGCGGCCCTCGATCGCCTGATCCTCGGGTCGCTCGAC AAGCGCGGGGCGGTTTGGCGAATCGGCGTGCCCGCCGCCTTTGGCGAGTTCAATCTCGGCGATGGCTCGGTGGTGACCGC CCGGCTTTGGGAATACGGCGGCGACGCCGTCAGTGGCTGCGGCGGTGTGCGGGTGGTGCTTGATCACACCTCGCAGAAGA TCAAAATGATCGGCCAGACCAACGACTCGGGCGTCGTCGAGCGCATCGATCTCTGTCTCTATACCCGCAAGGCCGCGATG TCGCACCGCAGCCAGATCTGTGAGATCGGCCTCGATACCGAAGCCTTGCGCACCGGCGATCGCCGAGGAACCCTGTTCGA CCTCGGGCTGGGCCTGCCCCATGTCGATTTCTGCGTGCGCGTCGAGGAGGCCTCGCTGCTTGAGCTGCTGCGCGCCCATT GCGGCACCAGCCTGCTTGACCCGGCCTCGCCGGTGCTGGAGGCCATTCGCCAAGCCTCGCCCCAGCGCGTGCTGCTGACG CGCATGGGCCGGGTCGAGGCCTGGACGCCGCTGCCGGGCCCCGGCGAGCCGCCGCTTGATGGTCCCCATACCCATCTCGA CCTTCAGGCCCTGGCCGAGGGCGCGACCCGTGCGGCCGATTCGCCGGTGCCGGCCACCCTTTACCCGGTCATCTCGCTGT TTCCCGGACAGCGGGTGGCCCTGGCCGCCTGA
Upstream 100 bases:
>100_bases TGGGCGGGCGCCACCGCGCGGGCGAGCCCCGGACTGAAGGGGCGCCAAGGCGCGCCTTTCCATGTTTTTTTATCCTGTCG CCTGAACAAGGACCTTGCCG
Downstream 100 bases:
>100_bases CGGCTAGCCAAACGCCAAAAGGCCACGCTTGCGCCTTGTGCCGCCCGGGCCCCGGGGGGGATGGGTCAGTTGGGCATTGG CCGGGGCGGCACCCGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIGAMPSPCIGICKMTDDGSLCVGCARTAEEIAQWSALEGDAKLTVFRDLPRRRAESGLGFPVLGHPVAALDRLILGSLD KRGAVWRIGVPAAFGEFNLGDGSVVTARLWEYGGDAVSGCGGVRVVLDHTSQKIKMIGQTNDSGVVERIDLCLYTRKAAM SHRSQICEIGLDTEALRTGDRRGTLFDLGLGLPHVDFCVRVEEASLLELLRAHCGTSLLDPASPVLEAIRQASPQRVLLT RMGRVEAWTPLPGPGEPPLDGPHTHLDLQALAEGATRAADSPVPATLYPVISLFPGQRVALAA
Sequences:
>Translated_303_residues MIGAMPSPCIGICKMTDDGSLCVGCARTAEEIAQWSALEGDAKLTVFRDLPRRRAESGLGFPVLGHPVAALDRLILGSLD KRGAVWRIGVPAAFGEFNLGDGSVVTARLWEYGGDAVSGCGGVRVVLDHTSQKIKMIGQTNDSGVVERIDLCLYTRKAAM SHRSQICEIGLDTEALRTGDRRGTLFDLGLGLPHVDFCVRVEEASLLELLRAHCGTSLLDPASPVLEAIRQASPQRVLLT RMGRVEAWTPLPGPGEPPLDGPHTHLDLQALAEGATRAADSPVPATLYPVISLFPGQRVALAA >Mature_303_residues MIGAMPSPCIGICKMTDDGSLCVGCARTAEEIAQWSALEGDAKLTVFRDLPRRRAESGLGFPVLGHPVAALDRLILGSLD KRGAVWRIGVPAAFGEFNLGDGSVVTARLWEYGGDAVSGCGGVRVVLDHTSQKIKMIGQTNDSGVVERIDLCLYTRKAAM SHRSQICEIGLDTEALRTGDRRGTLFDLGLGLPHVDFCVRVEEASLLELLRAHCGTSLLDPASPVLEAIRQASPQRVLLT RMGRVEAWTPLPGPGEPPLDGPHTHLDLQALAEGATRAADSPVPATLYPVISLFPGQRVALAA
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32231; Mature: 32231
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGAMPSPCIGICKMTDDGSLCVGCARTAEEIAQWSALEGDAKLTVFRDLPRRRAESGLG CCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCC FPVLGHPVAALDRLILGSLDKRGAVWRIGVPAAFGEFNLGDGSVVTARLWEYGGDAVSGC CCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEHHHCCCCHHCCC GGVRVVLDHTSQKIKMIGQTNDSGVVERIDLCLYTRKAAMSHRSQICEIGLDTEALRTGD CCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC RRGTLFDLGLGLPHVDFCVRVEEASLLELLRAHCGTSLLDPASPVLEAIRQASPQRVLLT CCCCEEEECCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEHHH RMGRVEAWTPLPGPGEPPLDGPHTHLDLQALAEGATRAADSPVPATLYPVISLFPGQRVA HCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEE LAA ECC >Mature Secondary Structure MIGAMPSPCIGICKMTDDGSLCVGCARTAEEIAQWSALEGDAKLTVFRDLPRRRAESGLG CCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCC FPVLGHPVAALDRLILGSLDKRGAVWRIGVPAAFGEFNLGDGSVVTARLWEYGGDAVSGC CCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEHHHCCCCHHCCC GGVRVVLDHTSQKIKMIGQTNDSGVVERIDLCLYTRKAAMSHRSQICEIGLDTEALRTGD CCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC RRGTLFDLGLGLPHVDFCVRVEEASLLELLRAHCGTSLLDPASPVLEAIRQASPQRVLLT CCCCEEEECCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEHHH RMGRVEAWTPLPGPGEPPLDGPHTHLDLQALAEGATRAADSPVPATLYPVISLFPGQRVA HCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEE LAA ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA