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The map label for this gene is 83592906

Identifier: 83592906

GI number: 83592906

Start: 1852294

End: 1853976

Strand: Direct

Name: 83592906

Synonym: Rru_A1571

Alternate gene names: NA

Gene position: 1852294-1853976 (Clockwise)

Preceding gene: 83592905

Following gene: 83592907

Centisome position: 42.55

GC content: 65.66

Gene sequence:

>1683_bases
ATGGCTGACAATTCCCCGCCCGTGCCGCCCCGTTTCGAAAAAAACGCCCTTTATTTCGTGCCTTTGGGCGGCGCCGGCGA
GATCGGGATGAACCTCAATCTCTATGCTCATCAGGGTAAATGGCTGATGGTCGACCTTGGGGTGACCTTCGGCAACGAAA
CCACCCCGGGCGTCGACATCATCCTGCCCGATCCGTCGTTCATCGAGGAACGCAAGGGCGATCTGGTCGGCCTGGTGCTG
ACCCATGCCCATGAGGACCACGTCGGCGCCGTGGCCTATCTGTGGCCCTATCTGGAATGCCCGGTCTACGCCACGCCCTT
TACCGCCGAGTTCCTGCGCCACAAGCTGCGCGAGGAGGGCATCGAGCCCGACGTGAAATTGATCGAGATTCCGCTGGGCG
GCCGCTTCACCGTCGGCCCCTTCGATATCGAGATGATCACCACCACCCATTCGATCCCCGAACCCAACCATCTGGCGATC
CGCACCACGGCCGGAACGGTGCTGCACACCGCCGATTGGAAGTTCGATCCCGAGCCGCTGGTCGGCCCGCCGGCCGACGA
GGCGGCCTTGCGGCGCCTGGGCGACGAGGGCGTGCTGGCCATGGTCGGCGACAGCACCAATATCTTCACCGAAGGCCATT
CCGCTTCCGAAGGCGATGTCCGGCGCTCGATGATCGATCTGTTCGCCCGCTTCCAGGGCCGCATCGCCGTTGGCTGCTTC
GCCTCGAACATCGCGCGCATGGAAACCATCGCCCTGGCCGCCAAGGCCAATGGCCGCGAGGTCGCCCTGGTCGGGCGGTC
GCTGTGGCGGATGATGGAGACGGCGCGGACCTGCGGTTATCTCAAGGGCTGCCCGGCCTTCCTCGGCGACGAGGAGGCGG
CCAAGCTGCCGCGAGACAAGGTGGTGTACATCTGCACCGGCAGCCAGGGCGAACCGCGGGCGGCGCTCAAGCGTATCGCC
AGCGGTAGCCACCCCTATGTCAGCCTGTCGGCCGGCGATGTGGTGATCTTCTCCAGCCGGGTCATTCCCGGCAATGAGCG
CTCGATCCTGCAGCTGCAAAACCAGTTGGTCGAGATGGGCGTCAAGCTCATCACCTCGCGCGACGCCATGGTCCATGTCT
CGGGCCACCCGGGCGCGGAAGAGGTGCGCAGCCTGTATGGCATGGTGCGTCCGAGCATCGCCCTGCCGGTTCACGGCGAG
TTCCTGCATCTTGATCACCATGCCGATGTCGCCCGCGATCTGGGCGTCGCCCATGTGGTGCGGATCACCAATGGCGCCGT
CGTCCGCCTTGACGGCGCGGAACCCACCGTGGTCGGCAAGGTGCCCTTTGGCCGTTTGGCGCTGGATGGCGATCGGCTTT
TGCAGATCGATTGCGAGATCATCCGCGATCGCAAGCGCATGGGCTATAACGGCTCCGTCGCCGTTTCGCTGGCGATCGAC
GACAAGGGCAAGCTGCTGGGAACCCCCAAGATCAGCGCCCGTGGTCTGCTTGACCCCGAAGACGACGCCGATGAGGTCGC
CGATCTGACCAACCGGGTGCGCGGCGCCGTCAACGCCGTCCGCCCCGCCGACCGCAAGGACGACGCCGCCGTGGCCGAGG
CGGTGCGGCTGGCGGTGCGCCGGGTCTTCCGTCAGGGGCAGAACCGCCGCCCGGTGACCGATATTCACGTTTTGCGGGTA
TGA

Upstream 100 bases:

>100_bases
CGGCCTACTCATCATTCACCGGCGTAACCAGCCGGACTGACTTTCACTGGCCGCATCCGGCCCCTTTTCTCTCAGTAGAC
CGATCGGACCTTCCCCACCT

Downstream 100 bases:

>100_bases
GGCAAAGCGGCGAAGGCGTTATACTCCCCGCTGCCGGCGGGGGGTCCGCCGCTGCCGATGTCGAGGAGAGCACAAGACCA
TGATCGGACGTCTTAATCAC

Product: metallo-beta-lactamase

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MADNSPPVPPRFEKNALYFVPLGGAGEIGMNLNLYAHQGKWLMVDLGVTFGNETTPGVDIILPDPSFIEERKGDLVGLVL
THAHEDHVGAVAYLWPYLECPVYATPFTAEFLRHKLREEGIEPDVKLIEIPLGGRFTVGPFDIEMITTTHSIPEPNHLAI
RTTAGTVLHTADWKFDPEPLVGPPADEAALRRLGDEGVLAMVGDSTNIFTEGHSASEGDVRRSMIDLFARFQGRIAVGCF
ASNIARMETIALAAKANGREVALVGRSLWRMMETARTCGYLKGCPAFLGDEEAAKLPRDKVVYICTGSQGEPRAALKRIA
SGSHPYVSLSAGDVVIFSSRVIPGNERSILQLQNQLVEMGVKLITSRDAMVHVSGHPGAEEVRSLYGMVRPSIALPVHGE
FLHLDHHADVARDLGVAHVVRITNGAVVRLDGAEPTVVGKVPFGRLALDGDRLLQIDCEIIRDRKRMGYNGSVAVSLAID
DKGKLLGTPKISARGLLDPEDDADEVADLTNRVRGAVNAVRPADRKDDAAVAEAVRLAVRRVFRQGQNRRPVTDIHVLRV

Sequences:

>Translated_560_residues
MADNSPPVPPRFEKNALYFVPLGGAGEIGMNLNLYAHQGKWLMVDLGVTFGNETTPGVDIILPDPSFIEERKGDLVGLVL
THAHEDHVGAVAYLWPYLECPVYATPFTAEFLRHKLREEGIEPDVKLIEIPLGGRFTVGPFDIEMITTTHSIPEPNHLAI
RTTAGTVLHTADWKFDPEPLVGPPADEAALRRLGDEGVLAMVGDSTNIFTEGHSASEGDVRRSMIDLFARFQGRIAVGCF
ASNIARMETIALAAKANGREVALVGRSLWRMMETARTCGYLKGCPAFLGDEEAAKLPRDKVVYICTGSQGEPRAALKRIA
SGSHPYVSLSAGDVVIFSSRVIPGNERSILQLQNQLVEMGVKLITSRDAMVHVSGHPGAEEVRSLYGMVRPSIALPVHGE
FLHLDHHADVARDLGVAHVVRITNGAVVRLDGAEPTVVGKVPFGRLALDGDRLLQIDCEIIRDRKRMGYNGSVAVSLAID
DKGKLLGTPKISARGLLDPEDDADEVADLTNRVRGAVNAVRPADRKDDAAVAEAVRLAVRRVFRQGQNRRPVTDIHVLRV
>Mature_559_residues
ADNSPPVPPRFEKNALYFVPLGGAGEIGMNLNLYAHQGKWLMVDLGVTFGNETTPGVDIILPDPSFIEERKGDLVGLVLT
HAHEDHVGAVAYLWPYLECPVYATPFTAEFLRHKLREEGIEPDVKLIEIPLGGRFTVGPFDIEMITTTHSIPEPNHLAIR
TTAGTVLHTADWKFDPEPLVGPPADEAALRRLGDEGVLAMVGDSTNIFTEGHSASEGDVRRSMIDLFARFQGRIAVGCFA
SNIARMETIALAAKANGREVALVGRSLWRMMETARTCGYLKGCPAFLGDEEAAKLPRDKVVYICTGSQGEPRAALKRIAS
GSHPYVSLSAGDVVIFSSRVIPGNERSILQLQNQLVEMGVKLITSRDAMVHVSGHPGAEEVRSLYGMVRPSIALPVHGEF
LHLDHHADVARDLGVAHVVRITNGAVVRLDGAEPTVVGKVPFGRLALDGDRLLQIDCEIIRDRKRMGYNGSVAVSLAIDD
KGKLLGTPKISARGLLDPEDDADEVADLTNRVRGAVNAVRPADRKDDAAVAEAVRLAVRRVFRQGQNRRPVTDIHVLRV

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 60857; Mature: 60725

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNSPPVPPRFEKNALYFVPLGGAGEIGMNLNLYAHQGKWLMVDLGVTFGNETTPGVDI
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEEEEEEECCCCCCCEEE
ILPDPSFIEERKGDLVGLVLTHAHEDHVGAVAYLWPYLECPVYATPFTAEFLRHKLREEG
EECCCHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHCC
IEPDVKLIEIPLGGRFTVGPFDIEMITTTHSIPEPNHLAIRTTAGTVLHTADWKFDPEPL
CCCCCEEEEECCCCEEEECCEEEEEEEEECCCCCCCCEEEEEECCEEEEECCCCCCCCCC
VGPPADEAALRRLGDEGVLAMVGDSTNIFTEGHSASEGDVRRSMIDLFARFQGRIAVGCF
CCCCCCHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEH
ASNIARMETIALAAKANGREVALVGRSLWRMMETARTCGYLKGCPAFLGDEEAAKLPRDK
HHHHHHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHCCCCC
VVYICTGSQGEPRAALKRIASGSHPYVSLSAGDVVIFSSRVIPGNERSILQLQNQLVEMG
EEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHH
VKLITSRDAMVHVSGHPGAEEVRSLYGMVRPSIALPVHGEFLHLDHHADVARDLGVAHVV
HHHEECCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCEEEECCHHHHHHHCCCEEEE
RITNGAVVRLDGAEPTVVGKVPFGRLALDGDRLLQIDCEIIRDRKRMGYNGSVAVSLAID
EECCCEEEEECCCCCEEEECCCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCEEEEEEEC
DKGKLLGTPKISARGLLDPEDDADEVADLTNRVRGAVNAVRPADRKDDAAVAEAVRLAVR
CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RVFRQGQNRRPVTDIHVLRV
HHHHCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
ADNSPPVPPRFEKNALYFVPLGGAGEIGMNLNLYAHQGKWLMVDLGVTFGNETTPGVDI
CCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEEEEEEECCCCCCCEEE
ILPDPSFIEERKGDLVGLVLTHAHEDHVGAVAYLWPYLECPVYATPFTAEFLRHKLREEG
EECCCHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHCC
IEPDVKLIEIPLGGRFTVGPFDIEMITTTHSIPEPNHLAIRTTAGTVLHTADWKFDPEPL
CCCCCEEEEECCCCEEEECCEEEEEEEEECCCCCCCCEEEEEECCEEEEECCCCCCCCCC
VGPPADEAALRRLGDEGVLAMVGDSTNIFTEGHSASEGDVRRSMIDLFARFQGRIAVGCF
CCCCCCHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEH
ASNIARMETIALAAKANGREVALVGRSLWRMMETARTCGYLKGCPAFLGDEEAAKLPRDK
HHHHHHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHCCCCC
VVYICTGSQGEPRAALKRIASGSHPYVSLSAGDVVIFSSRVIPGNERSILQLQNQLVEMG
EEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHH
VKLITSRDAMVHVSGHPGAEEVRSLYGMVRPSIALPVHGEFLHLDHHADVARDLGVAHVV
HHHEECCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCEEEECCHHHHHHHCCCEEEE
RITNGAVVRLDGAEPTVVGKVPFGRLALDGDRLLQIDCEIIRDRKRMGYNGSVAVSLAID
EECCCEEEEECCCCCEEEECCCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCEEEEEEEC
DKGKLLGTPKISARGLLDPEDDADEVADLTNRVRGAVNAVRPADRKDDAAVAEAVRLAVR
CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RVFRQGQNRRPVTDIHVLRV
HHHHCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]