| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is lon [H]
Identifier: 83592887
GI number: 83592887
Start: 1830342
End: 1832762
Strand: Direct
Name: lon [H]
Synonym: Rru_A1552
Alternate gene names: 83592887
Gene position: 1830342-1832762 (Clockwise)
Preceding gene: 83592886
Following gene: 83592888
Centisome position: 42.05
GC content: 62.16
Gene sequence:
>2421_bases GTGAACGCTATTCCCACACAAGTCTTTCCCGTCCTGCCGCTGCGGGATATCGTCGTCTTCCCGCATATGATCGTGCCGCT GTTCGTAGGGCGCGAGAAATCCGTGCGCGCCCTTGAAGACGTGATGCGCGAGGACAAGCAGATCCTGCTTGTCGCGCAGA AGAACGCCACGCAAGACGACCCCGGTCCCGACGATATCTATACGGTCGGCACCGTCAGCACCGTGCTTCAGTTGCTGCGC CTGCCCGACGGCACGGTGAAGGTCCTGGTCGAGGGCAGCCATCGCGCCCGCATCGGCGCCTATACCGCGCGCGAGGACTT CTTCGAGGCCGAGGCGACGATCCTGGCCGACGACGAGGGCGATCACCAGGAGATCGAGGCGCTGGGCCGCTCGGTGATCA ACCAGTTCGAACAGTACATCAAGCTCAACAAGAAGATTCCGCCCGAGGTTCTGGTCTCGATCAACCAGATCGAGGACGCG GCCAAACTGGCCGATACGGTGGCGTCGCATCTGGTGCTCAAGATCGCCGACAAGCAGGAACTGCTTGAGATCGAGACGAT CGCCGAGCGGCTGGAGCGGGTCTATTCCTTCATGGAGTCCGAAATCGGCGTGCTCCAGGTGGAAAAGAAGATCCGCAACC GCGTGAAGCGCCAGATGGAGAAGACCCAGCGCGAGTACTATCTGAACGAGCAGCTCAAGGCCATTCAGAAGGAGCTGGGC GAGGGCGAGGACGGCCGCGACGAGCTTCAAGAGCTGGAAGACCGCATCGCCGAGACCAAGCTGACCAAGGAGGCCAAGGA AAAGGCCCTGGGCGAGCTGAAGAAGCTGCGCAACATGAGCCCGATGTCGGCCGAGGCCACGGTGGTGCGCAACTACCTTG ACTGGATGCTGGCCATTCCCTGGCAGAAGCGCACCCGGGTCAAGAAGGACCTGAAGATCGCCCATAACGTTCTCAACACC GATCACTACGGCCTTGATAAGGTCAAGGACCGCATCCTTGAATATCTGGCCGTTCAGCTGCGCACCCAGAAGATCAAGGG GCCGATCCTCTGCCTCGTCGGTCCGCCGGGCGTCGGCAAGACCTCGCTTGGCAAGTCGATCGCCCGGGCGACGGGGCGGA ATTTCGTGCGGGTGTCGCTGGGCGGCGTGCGCGACGAGTCCGAGATCCGTGGCCACCGGCGCACCTATATCGGCTCGATG CCCGGCAAGATCATTCAGGGGATGCGCAAGGCCAAGTCGTCCAACCCGTTCTTCCTGCTCGACGAGATCGACAAGCTGGG CAACGACTGGCGCGGCGATCCGTCCTCGGCCCTGCTCGAGGTGCTCGACCCCGAACAGAACAACACCTTCAATGATCACT ACCTCGAGGTTGATTATGACCTCTCGGACGTGATGTTCATGACCACGGCCAATTCGCTGCGCATGCCCCAGCCGCTGCTT GACCGCATGGAGATCATTCGCCTCTCGGGCTATACCGAGGACGAGAAGATCGAAATCGCCAAGCGCCACCTGATCGACAA GCAGGTGAAGGCCAATGGCTTGCGTCGCGGCGAATGGTCGATTTCCGACGACGCCCTGCGCGACCTGATCCGCTATTACA CCCGGGAAGCCGGCGTGCGCAGCTTGGAACGCGAACTGGCCAATCTGACCCGTAAGGCGACCAAGGAAATCCTGCTGCGC AAGGGCGCCAAGGTCGGGGTCAAGGTGACCCGCGCCAATCTCGAAAAATACTCGGGCGTTCGCAAATACCGTTATGGCGA GGCCGAGCGCGAGGATCTGGTGGGGGTGACCACCGGTCTAGCCTGGACCGAGGTCGGCGGCGAATTGCTGTCGATCGAGG CGGTGATGATGCCGGGTAAGGGTCAGGTCACCCTGACCGGCCAGCTTGGCGACGTGATGAAGGAATCCGTTCAGGCGGCC CGCTCGTTCGTCCGCTCGCGCGCCGTGACCTATGGCATCAAGCCGACCCAATTCGAGAAGGGCGACATCCACGTTCACGT TCCCGAAGGGGCCACCCCGAAGGACGGCCCCTCGGCCGGTGTCGCCATGTGCACCTCGATCGTTTCGGCGATGACCGGCA TCGCCGTGCGCAAGGACATCGCCATGACCGGCGAGATCACCCTGCGCGGGCGGGTTCTGCCGATCGGCGGCTTGAAGGAA AAGCTGCTGGCGGCCTTGCGCGGCGGCATCAAGACGGTTCTGATCCCCAAGGATAACGAAAAGGATCTGGCCGAGATTCC CGATAACGTCAAACGCGGCCTGACCATCATTCCGGTCGGGCATGCCGATGAGGTTCTGGAATTGGCCCTGGTGCGTAAGC TGACGCCGATCGAATGGATCTCGCCCGATGAGGCTGAGGAAGCCCGGCTGAAGTCGAAGGCGGCCGAGGCTCCGGCGGAG GGCGACGTCGTTACCCATTAA
Upstream 100 bases:
>100_bases GTGCTGACCAACGGCCCGCCCGACCGGGGCTTGGTCGACCGCTCCCGACGCGCCGCGCCTGACCATCGGGCGGCCGTCCG CGAACCAGAAAGGAAGGCCG
Downstream 100 bases:
>100_bases GATCATCCCGCGCCCAAGGGATCGTCCCTTACCGCAAAGGATTTGATCTAAATCCCCATCCTCCTATTGGGATAGGGACT TTCCTTGAATTGATTTCGGG
Product: Lon-A peptidase
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MNAIPTQVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNATQDDPGPDDIYTVGTVSTVLQLLR LPDGTVKVLVEGSHRARIGAYTAREDFFEAEATILADDEGDHQEIEALGRSVINQFEQYIKLNKKIPPEVLVSINQIEDA AKLADTVASHLVLKIADKQELLEIETIAERLERVYSFMESEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKELG EGEDGRDELQELEDRIAETKLTKEAKEKALGELKKLRNMSPMSAEATVVRNYLDWMLAIPWQKRTRVKKDLKIAHNVLNT DHYGLDKVKDRILEYLAVQLRTQKIKGPILCLVGPPGVGKTSLGKSIARATGRNFVRVSLGGVRDESEIRGHRRTYIGSM PGKIIQGMRKAKSSNPFFLLDEIDKLGNDWRGDPSSALLEVLDPEQNNTFNDHYLEVDYDLSDVMFMTTANSLRMPQPLL DRMEIIRLSGYTEDEKIEIAKRHLIDKQVKANGLRRGEWSISDDALRDLIRYYTREAGVRSLERELANLTRKATKEILLR KGAKVGVKVTRANLEKYSGVRKYRYGEAEREDLVGVTTGLAWTEVGGELLSIEAVMMPGKGQVTLTGQLGDVMKESVQAA RSFVRSRAVTYGIKPTQFEKGDIHVHVPEGATPKDGPSAGVAMCTSIVSAMTGIAVRKDIAMTGEITLRGRVLPIGGLKE KLLAALRGGIKTVLIPKDNEKDLAEIPDNVKRGLTIIPVGHADEVLELALVRKLTPIEWISPDEAEEARLKSKAAEAPAE GDVVTH
Sequences:
>Translated_806_residues MNAIPTQVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNATQDDPGPDDIYTVGTVSTVLQLLR LPDGTVKVLVEGSHRARIGAYTAREDFFEAEATILADDEGDHQEIEALGRSVINQFEQYIKLNKKIPPEVLVSINQIEDA AKLADTVASHLVLKIADKQELLEIETIAERLERVYSFMESEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKELG EGEDGRDELQELEDRIAETKLTKEAKEKALGELKKLRNMSPMSAEATVVRNYLDWMLAIPWQKRTRVKKDLKIAHNVLNT DHYGLDKVKDRILEYLAVQLRTQKIKGPILCLVGPPGVGKTSLGKSIARATGRNFVRVSLGGVRDESEIRGHRRTYIGSM PGKIIQGMRKAKSSNPFFLLDEIDKLGNDWRGDPSSALLEVLDPEQNNTFNDHYLEVDYDLSDVMFMTTANSLRMPQPLL DRMEIIRLSGYTEDEKIEIAKRHLIDKQVKANGLRRGEWSISDDALRDLIRYYTREAGVRSLERELANLTRKATKEILLR KGAKVGVKVTRANLEKYSGVRKYRYGEAEREDLVGVTTGLAWTEVGGELLSIEAVMMPGKGQVTLTGQLGDVMKESVQAA RSFVRSRAVTYGIKPTQFEKGDIHVHVPEGATPKDGPSAGVAMCTSIVSAMTGIAVRKDIAMTGEITLRGRVLPIGGLKE KLLAALRGGIKTVLIPKDNEKDLAEIPDNVKRGLTIIPVGHADEVLELALVRKLTPIEWISPDEAEEARLKSKAAEAPAE GDVVTH >Mature_806_residues MNAIPTQVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNATQDDPGPDDIYTVGTVSTVLQLLR LPDGTVKVLVEGSHRARIGAYTAREDFFEAEATILADDEGDHQEIEALGRSVINQFEQYIKLNKKIPPEVLVSINQIEDA AKLADTVASHLVLKIADKQELLEIETIAERLERVYSFMESEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKELG EGEDGRDELQELEDRIAETKLTKEAKEKALGELKKLRNMSPMSAEATVVRNYLDWMLAIPWQKRTRVKKDLKIAHNVLNT DHYGLDKVKDRILEYLAVQLRTQKIKGPILCLVGPPGVGKTSLGKSIARATGRNFVRVSLGGVRDESEIRGHRRTYIGSM PGKIIQGMRKAKSSNPFFLLDEIDKLGNDWRGDPSSALLEVLDPEQNNTFNDHYLEVDYDLSDVMFMTTANSLRMPQPLL DRMEIIRLSGYTEDEKIEIAKRHLIDKQVKANGLRRGEWSISDDALRDLIRYYTREAGVRSLERELANLTRKATKEILLR KGAKVGVKVTRANLEKYSGVRKYRYGEAEREDLVGVTTGLAWTEVGGELLSIEAVMMPGKGQVTLTGQLGDVMKESVQAA RSFVRSRAVTYGIKPTQFEKGDIHVHVPEGATPKDGPSAGVAMCTSIVSAMTGIAVRKDIAMTGEITLRGRVLPIGGLKE KLLAALRGGIKTVLIPKDNEKDLAEIPDNVKRGLTIIPVGHADEVLELALVRKLTPIEWISPDEAEEARLKSKAAEAPAE GDVVTH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=565, Percent_Identity=46.5486725663717, Blast_Score=508, Evalue=1e-144, Organism=Homo sapiens, GI21396489, Length=849, Percent_Identity=36.5135453474676, Blast_Score=501, Evalue=1e-141, Organism=Escherichia coli, GI1786643, Length=762, Percent_Identity=66.2729658792651, Blast_Score=1027, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=703, Percent_Identity=39.1180654338549, Blast_Score=478, Evalue=1e-135, Organism=Caenorhabditis elegans, GI17556486, Length=772, Percent_Identity=33.2901554404145, Blast_Score=424, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319449, Length=711, Percent_Identity=40.084388185654, Blast_Score=513, Evalue=1e-146, Organism=Drosophila melanogaster, GI24666867, Length=697, Percent_Identity=41.3199426111908, Blast_Score=501, Evalue=1e-141, Organism=Drosophila melanogaster, GI221513036, Length=697, Percent_Identity=41.3199426111908, Blast_Score=501, Evalue=1e-141,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 90082; Mature: 90082
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAIPTQVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNATQDD CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC PGPDDIYTVGTVSTVLQLLRLPDGTVKVLVEGSHRARIGAYTAREDFFEAEATILADDEG CCCCCEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCHHHHHHHHCCEEEEECCCC DHQEIEALGRSVINQFEQYIKLNKKIPPEVLVSINQIEDAAKLADTVASHLVLKIADKQE CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LLEIETIAERLERVYSFMESEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKELG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EGEDGRDELQELEDRIAETKLTKEAKEKALGELKKLRNMSPMSAEATVVRNYLDWMLAIP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC WQKRTRVKKDLKIAHNVLNTDHYGLDKVKDRILEYLAVQLRTQKIKGPILCLVGPPGVGK CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCH TSLGKSIARATGRNFVRVSLGGVRDESEIRGHRRTYIGSMPGKIIQGMRKAKSSNPFFLL HHHHHHHHHHCCCCEEEEEECCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEH DEIDKLGNDWRGDPSSALLEVLDPEQNNTFNDHYLEVDYDLSDVMFMTTANSLRMPQPLL HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHEEEEECCCCCCCCHHHH DRMEIIRLSGYTEDEKIEIAKRHLIDKQVKANGLRRGEWSISDDALRDLIRYYTREAGVR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SLERELANLTRKATKEILLRKGAKVGVKVTRANLEKYSGVRKYRYGEAEREDLVGVTTGL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCHHHHCCCCCCHHHHHHHHCCC AWTEVGGELLSIEAVMMPGKGQVTLTGQLGDVMKESVQAARSFVRSRAVTYGIKPTQFEK HHHHCCCCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC GDIHVHVPEGATPKDGPSAGVAMCTSIVSAMTGIAVRKDIAMTGEITLRGRVLPIGGLKE CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEEEEEEEEEECCCHHH KLLAALRGGIKTVLIPKDNEKDLAEIPDNVKRGLTIIPVGHADEVLELALVRKLTPIEWI HHHHHHHCCCEEEEECCCCCCHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCC SPDEAEEARLKSKAAEAPAEGDVVTH CCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNAIPTQVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMREDKQILLVAQKNATQDD CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC PGPDDIYTVGTVSTVLQLLRLPDGTVKVLVEGSHRARIGAYTAREDFFEAEATILADDEG CCCCCEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCHHHHHHHHCCEEEEECCCC DHQEIEALGRSVINQFEQYIKLNKKIPPEVLVSINQIEDAAKLADTVASHLVLKIADKQE CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LLEIETIAERLERVYSFMESEIGVLQVEKKIRNRVKRQMEKTQREYYLNEQLKAIQKELG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EGEDGRDELQELEDRIAETKLTKEAKEKALGELKKLRNMSPMSAEATVVRNYLDWMLAIP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC WQKRTRVKKDLKIAHNVLNTDHYGLDKVKDRILEYLAVQLRTQKIKGPILCLVGPPGVGK CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCH TSLGKSIARATGRNFVRVSLGGVRDESEIRGHRRTYIGSMPGKIIQGMRKAKSSNPFFLL HHHHHHHHHHCCCCEEEEEECCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHCCCCCEEEH DEIDKLGNDWRGDPSSALLEVLDPEQNNTFNDHYLEVDYDLSDVMFMTTANSLRMPQPLL HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHEEEEECCCCCCCCHHHH DRMEIIRLSGYTEDEKIEIAKRHLIDKQVKANGLRRGEWSISDDALRDLIRYYTREAGVR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SLERELANLTRKATKEILLRKGAKVGVKVTRANLEKYSGVRKYRYGEAEREDLVGVTTGL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCHHHHCCCCCCHHHHHHHHCCC AWTEVGGELLSIEAVMMPGKGQVTLTGQLGDVMKESVQAARSFVRSRAVTYGIKPTQFEK HHHHCCCCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC GDIHVHVPEGATPKDGPSAGVAMCTSIVSAMTGIAVRKDIAMTGEITLRGRVLPIGGLKE CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEEEEEEEEEECCCHHH KLLAALRGGIKTVLIPKDNEKDLAEIPDNVKRGLTIIPVGHADEVLELALVRKLTPIEWI HHHHHHHCCCEEEEECCCCCCHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCC SPDEAEEARLKSKAAEAPAEGDVVTH CCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8655539 [H]