| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592795
Identifier: 83592795
GI number: 83592795
Start: 1723489
End: 1724778
Strand: Reverse
Name: 83592795
Synonym: Rru_A1459
Alternate gene names: NA
Gene position: 1724778-1723489 (Counterclockwise)
Preceding gene: 161777625
Following gene: 83592794
Centisome position: 39.62
GC content: 71.24
Gene sequence:
>1290_bases ATGGCCTTCCCCTCCTTGTCCGCCCCGGCGCTTCGGCGCGGCGTGACCCTGTTGATGGCCGGGCTCGTCGTCCAGGCGAT GGGGCACTCCTTCGTCCTGATCGTTCTGCCGGCCTTGGGGCGGCAGATGGGGATCGCGGATGTGAGGATCGGGCTGATTC TCAGTCTCTCGGCCCTGGTTCTCAGTCTGTCGGCGCCGCTCTGGGGCATGATCGGGGACACCTGGGGACGGCGCCGGGTG ATCCTGATCGCCCTGGCCGCGGCGGCGGCCTTTCCCGCCTTGCTGGCTCTTCTGCTTTACGGCCGGCTGTCGCTGGGGGT CTCGGCCACGGCGACTTTCGCGATGCTCCTGGCCTTGCGCCTTGTCCTGGCCGCCCTTGGCGGTGGCCTTATGCCGGCGG CTCAGGCCTATCTGGCCGATGTGACCAGCCGGGAGGGCCGGGCCCGGGGAATGGGCGGGATGGGGGCGGCCTTCGGCCTG GGCGGTCTCGCCGGCGCCGGACTGGCCTTCGCCTTGGGCGGACGCGGATGGATGCCGGCCCTGGGGCTGCTTTCCGGGGT GGCGGCGCTGGTGGTGATCCTGGTCTGGCGCGGCTTGTCTGAACCGCCCCGCGCCGTTCTCCCCCAGACATCGGGGGCGG TCCGCCTGCGTCCCCTCGCCCCCTTTCTGGGGATCACCATCAGCGGACTCGCGGTTTACAGCCTGATTGGTCAGGTGACG GTGCTGCGTTTACAAGATGGCTTCGGCCTGTCCCTTGAAGCCTCGATCGGCACGGCCGGCGGCCTGATGATGCTCACCAT GCTGGCCATGATCACCGCCCAGGGCTTGATCGTGCCCCGCCTCGCCCGCACTCCCGGAACCTTGCTCAGGGTCGGCAGCG TGGTGGCCTTGCTTGCCGGGCTGCTCGCCCTGGCGGCCCCCCAGGTGGCGGTGCTGGGGGTGGCGATGGCCGGCCTTGGC GCCGGACTGGGCCTGACCTTGCCCGGCAATCTCACGGCGCTCAGCCTGCGCGGCGGACCGGGGGTCCAGGCCCGGGTCGC GGGGATCAACGCCCTGGCCCAGGGCGCCGGGCTGGCTTTGGGTCCGCTGCTCGGCGCCGGCCTGCATCAGATCTCCCCCG TGGCGCCCTATGGGGCGGCCACCGGGTTTTTGCTCGGGGTGGGCGTCTTGGCCTGGGGAGCGACGCGCGGCGGGTGTTCG CCCGATGCTCTCGCCCGTTCGCCCGCTGATCGCCCGCAGGGGCGGGCGGCCCATACTGAGGCTTTGCCTTCGAAGGAGAC CGCATCATGA
Upstream 100 bases:
>100_bases GGCGGCGGCGCTTGTTTCGACCTGTTCGGCGTTTGACAGCGGCGATGGACCAAGACCGATAGGCTGGACGCTCCCGCAGT TGATCCTGGAGCGTTCCTCG
Downstream 100 bases:
>100_bases GCCTTGCCCGCTCTCCCCGCGTCGCCGCCCTCGGCGTTTTGTTGTTCGGCCTGCCGGCCCAGGCCGAAGAGCCGGCCGTG TCGGAAGACCCGGTCTTCAC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MAFPSLSAPALRRGVTLLMAGLVVQAMGHSFVLIVLPALGRQMGIADVRIGLILSLSALVLSLSAPLWGMIGDTWGRRRV ILIALAAAAAFPALLALLLYGRLSLGVSATATFAMLLALRLVLAALGGGLMPAAQAYLADVTSREGRARGMGGMGAAFGL GGLAGAGLAFALGGRGWMPALGLLSGVAALVVILVWRGLSEPPRAVLPQTSGAVRLRPLAPFLGITISGLAVYSLIGQVT VLRLQDGFGLSLEASIGTAGGLMMLTMLAMITAQGLIVPRLARTPGTLLRVGSVVALLAGLLALAAPQVAVLGVAMAGLG AGLGLTLPGNLTALSLRGGPGVQARVAGINALAQGAGLALGPLLGAGLHQISPVAPYGAATGFLLGVGVLAWGATRGGCS PDALARSPADRPQGRAAHTEALPSKETAS
Sequences:
>Translated_429_residues MAFPSLSAPALRRGVTLLMAGLVVQAMGHSFVLIVLPALGRQMGIADVRIGLILSLSALVLSLSAPLWGMIGDTWGRRRV ILIALAAAAAFPALLALLLYGRLSLGVSATATFAMLLALRLVLAALGGGLMPAAQAYLADVTSREGRARGMGGMGAAFGL GGLAGAGLAFALGGRGWMPALGLLSGVAALVVILVWRGLSEPPRAVLPQTSGAVRLRPLAPFLGITISGLAVYSLIGQVT VLRLQDGFGLSLEASIGTAGGLMMLTMLAMITAQGLIVPRLARTPGTLLRVGSVVALLAGLLALAAPQVAVLGVAMAGLG AGLGLTLPGNLTALSLRGGPGVQARVAGINALAQGAGLALGPLLGAGLHQISPVAPYGAATGFLLGVGVLAWGATRGGCS PDALARSPADRPQGRAAHTEALPSKETAS >Mature_428_residues AFPSLSAPALRRGVTLLMAGLVVQAMGHSFVLIVLPALGRQMGIADVRIGLILSLSALVLSLSAPLWGMIGDTWGRRRVI LIALAAAAAFPALLALLLYGRLSLGVSATATFAMLLALRLVLAALGGGLMPAAQAYLADVTSREGRARGMGGMGAAFGLG GLAGAGLAFALGGRGWMPALGLLSGVAALVVILVWRGLSEPPRAVLPQTSGAVRLRPLAPFLGITISGLAVYSLIGQVTV LRLQDGFGLSLEASIGTAGGLMMLTMLAMITAQGLIVPRLARTPGTLLRVGSVVALLAGLLALAAPQVAVLGVAMAGLGA GLGLTLPGNLTALSLRGGPGVQARVAGINALAQGAGLALGPLLGAGLHQISPVAPYGAATGFLLGVGVLAWGATRGGCSP DALARSPADRPQGRAAHTEALPSKETAS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42670; Mature: 42539
Theoretical pI: Translated: 12.27; Mature: 12.27
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFPSLSAPALRRGVTLLMAGLVVQAMGHSFVLIVLPALGRQMGIADVRIGLILSLSALV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHH LSLSAPLWGMIGDTWGRRRVILIALAAAAAFPALLALLLYGRLSLGVSATATFAMLLALR HHHCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LVLAALGGGLMPAAQAYLADVTSREGRARGMGGMGAAFGLGGLAGAGLAFALGGRGWMPA HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCHHH LGLLSGVAALVVILVWRGLSEPPRAVLPQTSGAVRLRPLAPFLGITISGLAVYSLIGQVT HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHE VLRLQDGFGLSLEASIGTAGGLMMLTMLAMITAQGLIVPRLARTPGTLLRVGSVVALLAG EEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHH LLALAAPQVAVLGVAMAGLGAGLGLTLPGNLTALSLRGGPGVQARVAGINALAQGAGLAL HHHHHCCHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCEEHHHHHHHHHHCCCCHH GPLLGAGLHQISPVAPYGAATGFLLGVGVLAWGATRGGCSPDALARSPADRPQGRAAHTE HHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHH ALPSKETAS CCCCCCCCC >Mature Secondary Structure AFPSLSAPALRRGVTLLMAGLVVQAMGHSFVLIVLPALGRQMGIADVRIGLILSLSALV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHH LSLSAPLWGMIGDTWGRRRVILIALAAAAAFPALLALLLYGRLSLGVSATATFAMLLALR HHHCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LVLAALGGGLMPAAQAYLADVTSREGRARGMGGMGAAFGLGGLAGAGLAFALGGRGWMPA HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCHHH LGLLSGVAALVVILVWRGLSEPPRAVLPQTSGAVRLRPLAPFLGITISGLAVYSLIGQVT HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHE VLRLQDGFGLSLEASIGTAGGLMMLTMLAMITAQGLIVPRLARTPGTLLRVGSVVALLAG EEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHH LLALAAPQVAVLGVAMAGLGAGLGLTLPGNLTALSLRGGPGVQARVAGINALAQGAGLAL HHHHHCCHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCEEHHHHHHHHHHCCCCHH GPLLGAGLHQISPVAPYGAATGFLLGVGVLAWGATRGGCSPDALARSPADRPQGRAAHTE HHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHH ALPSKETAS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA