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The map label for this gene is atoD [H]

Identifier: 83592719

GI number: 83592719

Start: 1631554

End: 1632207

Strand: Reverse

Name: atoD [H]

Synonym: Rru_A1383

Alternate gene names: 83592719

Gene position: 1632207-1631554 (Counterclockwise)

Preceding gene: 83592723

Following gene: 83592718

Centisome position: 37.5

GC content: 64.22

Gene sequence:

>654_bases
ATGTCCAAGGTCGTTTCCATAAGGGACGCGGTCGAACGAATTCCCGATGGCGCGTCGATCATGATCGGCGGCTTCATGGG
AGTCGGCTCCCCCCATCGCCTGATCGACGAACTGGTCCGCCAGGGCAAACGCGATCTGACGATCATCGCCAATGACACCG
CCCGGCCCAATCACGCCATCGGCAAGCTGATCGATGCCGGCGCCGTGTCGCGGCTGATCGCCTCGCATATCGGACTGAAC
CCCGAAACCCAGCGGCGGATGATCGCCGGCGAGATCGATGTCACCCTCGTTCCCCAGGGCACCCTGGCCGAGCAGATCCG
CGCCGGCGGCACCGGCCTTGGCGGGGTGCTGACGCCGACGGGCGTCGGCACGCTGGTGCAAGACGGCAAACAGACCGTCG
ATGTCGATGGCACGGTTTTCCTGCTGGAAAAGCCGATCAAGGCCGATTTCGCCCTGATCCACGCCTGGCGCGCCGATCAC
CTGGGCAATCTTCAATACGAACTGACGGCCAGGAACTTCAATCCGTCGATGGCCATGGCGGCGGCGACGGTGATCGCCGA
GGCCCAGACCATCGTTCCCGTCGGCGTCATCCCCCCCGATCAGGTCGAGACCGTCAGCATCATCGTCGATCTCATCGTTG
CCCGGGAGGCCTAA

Upstream 100 bases:

>100_bases
ATGGGGCGGGACCAGAGCGGCGCACGCGAGGTGATCACGATCCCCCGCCGAGCCCGTCTCCTGGAACGCTTCCACCCCTT
GCCTGAGAGAGGAGACAACA

Downstream 100 bases:

>100_bases
AACCATGGACGCCAAAACCCTTATCGCCCGCCGTGTCGCCCAGGAACTCACCCAGGGCAATCTCGTCAATCTCGGCATCG
GCCTGCCGACCCTGGTCGCC

Product: acetate CoA-transferase

Products: NA

Alternate protein names: Acetyl-CoA:acetoacetate-CoA transferase subunit alpha [H]

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSKVVSIRDAVERIPDGASIMIGGFMGVGSPHRLIDELVRQGKRDLTIIANDTARPNHAIGKLIDAGAVSRLIASHIGLN
PETQRRMIAGEIDVTLVPQGTLAEQIRAGGTGLGGVLTPTGVGTLVQDGKQTVDVDGTVFLLEKPIKADFALIHAWRADH
LGNLQYELTARNFNPSMAMAAATVIAEAQTIVPVGVIPPDQVETVSIIVDLIVAREA

Sequences:

>Translated_217_residues
MSKVVSIRDAVERIPDGASIMIGGFMGVGSPHRLIDELVRQGKRDLTIIANDTARPNHAIGKLIDAGAVSRLIASHIGLN
PETQRRMIAGEIDVTLVPQGTLAEQIRAGGTGLGGVLTPTGVGTLVQDGKQTVDVDGTVFLLEKPIKADFALIHAWRADH
LGNLQYELTARNFNPSMAMAAATVIAEAQTIVPVGVIPPDQVETVSIIVDLIVAREA
>Mature_216_residues
SKVVSIRDAVERIPDGASIMIGGFMGVGSPHRLIDELVRQGKRDLTIIANDTARPNHAIGKLIDAGAVSRLIASHIGLNP
ETQRRMIAGEIDVTLVPQGTLAEQIRAGGTGLGGVLTPTGVGTLVQDGKQTVDVDGTVFLLEKPIKADFALIHAWRADHL
GNLQYELTARNFNPSMAMAAATVIAEAQTIVPVGVIPPDQVETVSIIVDLIVAREA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG1788

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=226, Percent_Identity=38.9380530973451, Blast_Score=178, Evalue=3e-45,
Organism=Homo sapiens, GI11545841, Length=223, Percent_Identity=39.0134529147982, Blast_Score=159, Evalue=1e-39,
Organism=Escherichia coli, GI1788551, Length=217, Percent_Identity=55.7603686635945, Blast_Score=244, Evalue=2e-66,
Organism=Escherichia coli, GI1787985, Length=237, Percent_Identity=26.5822784810127, Blast_Score=60, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17531517, Length=228, Percent_Identity=37.719298245614, Blast_Score=166, Evalue=1e-41,
Organism=Drosophila melanogaster, GI21358325, Length=222, Percent_Identity=39.1891891891892, Blast_Score=164, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24655794, Length=222, Percent_Identity=39.1891891891892, Blast_Score=164, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012792
- InterPro:   IPR004165
- InterPro:   IPR004163 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.8 [H]

Molecular weight: Translated: 22919; Mature: 22788

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS01273 COA_TRANSF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVVSIRDAVERIPDGASIMIGGFMGVGSPHRLIDELVRQGKRDLTIIANDTARPNHAI
CCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
GKLIDAGAVSRLIASHIGLNPETQRRMIAGEIDVTLVPQGTLAEQIRAGGTGLGGVLTPT
HHHHHHHHHHHHHHHHCCCCCCHHHHEEECCEEEEEECCCHHHHHHHCCCCCCCCCCCCC
GVGTLVQDGKQTVDVDGTVFLLEKPIKADFALIHAWRADHLGNLQYELTARNFNPSMAMA
CCHHHHHCCCEEEECCCEEEEEECCCCHHHHEEEEHHHHCCCCEEEEEEECCCCCHHHHH
AATVIAEAQTIVPVGVIPPDQVETVSIIVDLIVAREA
HHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKVVSIRDAVERIPDGASIMIGGFMGVGSPHRLIDELVRQGKRDLTIIANDTARPNHAI
CCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
GKLIDAGAVSRLIASHIGLNPETQRRMIAGEIDVTLVPQGTLAEQIRAGGTGLGGVLTPT
HHHHHHHHHHHHHHHHCCCCCCHHHHEEECCEEEEEECCCHHHHHHHCCCCCCCCCCCCC
GVGTLVQDGKQTVDVDGTVFLLEKPIKADFALIHAWRADHLGNLQYELTARNFNPSMAMA
CCHHHHHCCCEEEECCCEEEEEECCCCHHHHEEEEHHHHCCCCEEEEEEECCCCCHHHHH
AATVIAEAQTIVPVGVIPPDQVETVSIIVDLIVAREA
HHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]