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The map label for this gene is atoA [H]

Identifier: 83592718

GI number: 83592718

Start: 1630893

End: 1631549

Strand: Reverse

Name: atoA [H]

Synonym: Rru_A1382

Alternate gene names: 83592718

Gene position: 1631549-1630893 (Counterclockwise)

Preceding gene: 83592719

Following gene: 83592717

Centisome position: 37.48

GC content: 68.65

Gene sequence:

>657_bases
ATGGACGCCAAAACCCTTATCGCCCGCCGTGTCGCCCAGGAACTCACCCAGGGCAATCTCGTCAATCTCGGCATCGGCCT
GCCGACCCTGGTCGCCAATTACCTTCCCCCCGGCATGTCTGTGTTCTTCCAGTCGGAGAACGGCATCATCGGCATGCAGC
CCCTGGAAGGCCCCGGCGGATCCTCCGAGGCCCTGACCGATGCCGGCGGCGCGCCGACCGGCATCATCCCCGGCGCCGCC
GCCTTTGACAGCGTTTCCTCCTTCGGCTTCATCCGGGGCGGCCACCTCGACGTCACCGTTCTGGGCGGCCTGCAGGTCGA
CGAAGCCGGTCAACTGGCCAATTGGGTGGTTCCGGGCAAGATGGTGCCGGGCATGGGCGGCGCCATGGACCTCGTCACCG
GCGCCCGCCGGGTGATCGTGGCGATGACCCATACCGCCAAGGGCGCGCCGAAGATCCTCAAGGCCTGCACCCTGCCGCTG
ACCTCGGTTCGCCGCATCGATCTGATCGTGACCGAGATGGCGGTGATCGAACCGACGGACGCCGGCCTCGTGCTGCGCGA
GCGCGCGCCGGGGGTCTCGCTTGAGGCGGTGATCGCCGCGACCGAGGCCCGCCTGATCGTCGAAGGCGAGACGCCCGAGA
TGACCCTCGCCGCCTGA

Upstream 100 bases:

>100_bases
GAGGCCCAGACCATCGTTCCCGTCGGCGTCATCCCCCCCGATCAGGTCGAGACCGTCAGCATCATCGTCGATCTCATCGT
TGCCCGGGAGGCCTAAAACC

Downstream 100 bases:

>100_bases
TCGGCGGACATCTTAGAGTTCCCCCATTGGAGGCGGCAGCAATGTCCCCGAACGTAATGGAAACCACCGCGGACCAGGAA
AGCCGCGGCAAGACCGGGGT

Product: butyryl-CoA:acetate CoA transferase

Products: NA

Alternate protein names: Acetyl-CoA:acetoacetate-CoA transferase subunit beta [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MDAKTLIARRVAQELTQGNLVNLGIGLPTLVANYLPPGMSVFFQSENGIIGMQPLEGPGGSSEALTDAGGAPTGIIPGAA
AFDSVSSFGFIRGGHLDVTVLGGLQVDEAGQLANWVVPGKMVPGMGGAMDLVTGARRVIVAMTHTAKGAPKILKACTLPL
TSVRRIDLIVTEMAVIEPTDAGLVLRERAPGVSLEAVIAATEARLIVEGETPEMTLAA

Sequences:

>Translated_218_residues
MDAKTLIARRVAQELTQGNLVNLGIGLPTLVANYLPPGMSVFFQSENGIIGMQPLEGPGGSSEALTDAGGAPTGIIPGAA
AFDSVSSFGFIRGGHLDVTVLGGLQVDEAGQLANWVVPGKMVPGMGGAMDLVTGARRVIVAMTHTAKGAPKILKACTLPL
TSVRRIDLIVTEMAVIEPTDAGLVLRERAPGVSLEAVIAATEARLIVEGETPEMTLAA
>Mature_218_residues
MDAKTLIARRVAQELTQGNLVNLGIGLPTLVANYLPPGMSVFFQSENGIIGMQPLEGPGGSSEALTDAGGAPTGIIPGAA
AFDSVSSFGFIRGGHLDVTVLGGLQVDEAGQLANWVVPGKMVPGMGGAMDLVTGARRVIVAMTHTAKGAPKILKACTLPL
TSVRRIDLIVTEMAVIEPTDAGLVLRERAPGVSLEAVIAATEARLIVEGETPEMTLAA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=203, Percent_Identity=45.8128078817734, Blast_Score=179, Evalue=1e-45,
Organism=Homo sapiens, GI11545841, Length=203, Percent_Identity=44.8275862068966, Blast_Score=176, Evalue=2e-44,
Organism=Escherichia coli, GI1788552, Length=211, Percent_Identity=59.2417061611374, Blast_Score=244, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17531517, Length=206, Percent_Identity=47.0873786407767, Blast_Score=176, Evalue=8e-45,
Organism=Drosophila melanogaster, GI21358325, Length=211, Percent_Identity=47.39336492891, Blast_Score=188, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24655794, Length=211, Percent_Identity=47.39336492891, Blast_Score=188, Evalue=2e-48,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.8 [H]

Molecular weight: Translated: 22349; Mature: 22349

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS01274 COA_TRANSF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKTLIARRVAQELTQGNLVNLGIGLPTLVANYLPPGMSVFFQSENGIIGMQPLEGPGG
CCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCC
SSEALTDAGGAPTGIIPGAAAFDSVSSFGFIRGGHLDVTVLGGLQVDEAGQLANWVVPGK
CCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEECCEEEEEEECCEEECCCCCCCEEEECCC
MVPGMGGAMDLVTGARRVIVAMTHTAKGAPKILKACTLPLTSVRRIDLIVTEMAVIEPTD
CCCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHEEEEEEEEEECCCC
AGLVLRERAPGVSLEAVIAATEARLIVEGETPEMTLAA
CCEEEECCCCCCCEEEEEEEECEEEEEECCCCCEEECC
>Mature Secondary Structure
MDAKTLIARRVAQELTQGNLVNLGIGLPTLVANYLPPGMSVFFQSENGIIGMQPLEGPGG
CCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCC
SSEALTDAGGAPTGIIPGAAAFDSVSSFGFIRGGHLDVTVLGGLQVDEAGQLANWVVPGK
CCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEECCEEEEEEECCEEECCCCCCCEEEECCC
MVPGMGGAMDLVTGARRVIVAMTHTAKGAPKILKACTLPLTSVRRIDLIVTEMAVIEPTD
CCCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHEEEEEEEEEECCCC
AGLVLRERAPGVSLEAVIAATEARLIVEGETPEMTLAA
CCEEEECCCCCCCEEEEEEEECEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]