Click here to switch to the map view.

The map label for this gene is 83592710

Identifier: 83592710

GI number: 83592710

Start: 1616935

End: 1617840

Strand: Reverse

Name: 83592710

Synonym: Rru_A1374

Alternate gene names: NA

Gene position: 1617840-1616935 (Counterclockwise)

Preceding gene: 83592711

Following gene: 83592709

Centisome position: 37.17

GC content: 62.8

Gene sequence:

>906_bases
ATGACCAAGCGCGCGGTTGTGGCCGGCATCAATGATTACCGCAATTGGAACTCCGTTGGTTTTGGCAATCTGTCGTGGTG
CCTGACCGACGCCCAATCCTTCGCCGAGGATGTCCTGGTTCACGGGCGCGGCTTCCGCCCCGACGATATCACCGTGCTGC
TCGATCGCGACGCGACGCGCACCAATATCCTCGAACACCTGCGCCGCCTGCTGGCGCGCGCCGATCTTGGCGATGTCATC
TGCCTTTACTTCTCCGGCCATGGCGACCGCGCCCAGGTGCCGGGCACTCCGTCGGAATGGCACGAGACCATTGTGCCCTA
TGACGGCGCGGCGATGATTTCAGATCACGAGATCAACGCCCTGATCGCCGGGCTGGAGTTCAACCGTCTCAATCTGACCC
TGGTGCTTGATAGCTGCCATTCCGGCGGGGTTTACGATCCGGCGCCCCCCCAGGGCAGCAAGGTGGCCCAATGGGGCGAA
GACAAGCTGGGCGCCCTGGTCTCGACCTGCAAAACCATCCTTCCCACCATCTGCGCTCAGACGGTCGATCCCTTCGTCAA
CAATATCCAGGCCATCCTGCGCGCCGTCGACAGCGCCACCATGACGGTGGACGGCGCCAAGGACACCGCCGAAACCGCCA
AGGCGACGCTGTTCTCGGCGTGCGATTTCGATGAGACGGCCAAGGAGAATCCAACCCTGCGCCATGGCTTCATGACCAAG
GCCCTGCTCGATACGGTCACTCAAAGCGCCTTCAAAATGCCCAACCGGCTGCTGGCCAGCGACCTGCGCGGCAAGGTCGC
GGCCTTCGTCAGCCAGTTCGGCACCTCGCAACAAACGCCCTGCCTGCGCGGCCGTCCGGTGCGCCAGGACGAGGACTTTT
TGACCGAATGGACCTTCAGCATCTAA

Upstream 100 bases:

>100_bases
TCAACGCCGTGCAGGCGACCAACCAGCCGCTGCGCGGCCCCTGGGTCGATGCCGAGCCCGGCTTCAGCTTCATCCAGAAA
CCGGCCTGAAGGAGCCTCCG

Downstream 100 bases:

>100_bases
CAAGCACGCGCTCTTAGGGGAAACAGGCCATGGCGAAATACGCTCTTTGCGTTGGCGTCAGCGACTATTCCAATTGGCGC
CATGGCGCCGATGGCCCCAG

Product: peptidase C14, caspase catalytic subunit p20

Products: NA

Alternate protein names: Caspase Domain Protein

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTKRAVVAGINDYRNWNSVGFGNLSWCLTDAQSFAEDVLVHGRGFRPDDITVLLDRDATRTNILEHLRRLLARADLGDVI
CLYFSGHGDRAQVPGTPSEWHETIVPYDGAAMISDHEINALIAGLEFNRLNLTLVLDSCHSGGVYDPAPPQGSKVAQWGE
DKLGALVSTCKTILPTICAQTVDPFVNNIQAILRAVDSATMTVDGAKDTAETAKATLFSACDFDETAKENPTLRHGFMTK
ALLDTVTQSAFKMPNRLLASDLRGKVAAFVSQFGTSQQTPCLRGRPVRQDEDFLTEWTFSI

Sequences:

>Translated_301_residues
MTKRAVVAGINDYRNWNSVGFGNLSWCLTDAQSFAEDVLVHGRGFRPDDITVLLDRDATRTNILEHLRRLLARADLGDVI
CLYFSGHGDRAQVPGTPSEWHETIVPYDGAAMISDHEINALIAGLEFNRLNLTLVLDSCHSGGVYDPAPPQGSKVAQWGE
DKLGALVSTCKTILPTICAQTVDPFVNNIQAILRAVDSATMTVDGAKDTAETAKATLFSACDFDETAKENPTLRHGFMTK
ALLDTVTQSAFKMPNRLLASDLRGKVAAFVSQFGTSQQTPCLRGRPVRQDEDFLTEWTFSI
>Mature_300_residues
TKRAVVAGINDYRNWNSVGFGNLSWCLTDAQSFAEDVLVHGRGFRPDDITVLLDRDATRTNILEHLRRLLARADLGDVIC
LYFSGHGDRAQVPGTPSEWHETIVPYDGAAMISDHEINALIAGLEFNRLNLTLVLDSCHSGGVYDPAPPQGSKVAQWGED
KLGALVSTCKTILPTICAQTVDPFVNNIQAILRAVDSATMTVDGAKDTAETAKATLFSACDFDETAKENPTLRHGFMTKA
LLDTVTQSAFKMPNRLLASDLRGKVAAFVSQFGTSQQTPCLRGRPVRQDEDFLTEWTFSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32949; Mature: 32817

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRAVVAGINDYRNWNSVGFGNLSWCLTDAQSFAEDVLVHGRGFRPDDITVLLDRDATR
CCCCEEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHH
TNILEHLRRLLARADLGDVICLYFSGHGDRAQVPGTPSEWHETIVPYDGAAMISDHEINA
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCEE
LIAGLEFNRLNLTLVLDSCHSGGVYDPAPPQGSKVAQWGEDKLGALVSTCKTILPTICAQ
EEEEEEECEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
TVDPFVNNIQAILRAVDSATMTVDGAKDTAETAKATLFSACDFDETAKENPTLRHGFMTK
HHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHH
ALLDTVTQSAFKMPNRLLASDLRGKVAAFVSQFGTSQQTPCLRGRPVRQDEDFLTEWTFS
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCC
I
C
>Mature Secondary Structure 
TKRAVVAGINDYRNWNSVGFGNLSWCLTDAQSFAEDVLVHGRGFRPDDITVLLDRDATR
CCCEEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHH
TNILEHLRRLLARADLGDVICLYFSGHGDRAQVPGTPSEWHETIVPYDGAAMISDHEINA
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCEE
LIAGLEFNRLNLTLVLDSCHSGGVYDPAPPQGSKVAQWGEDKLGALVSTCKTILPTICAQ
EEEEEEECEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
TVDPFVNNIQAILRAVDSATMTVDGAKDTAETAKATLFSACDFDETAKENPTLRHGFMTK
HHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHH
ALLDTVTQSAFKMPNRLLASDLRGKVAAFVSQFGTSQQTPCLRGRPVRQDEDFLTEWTFS
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA