| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592711
Identifier: 83592711
GI number: 83592711
Start: 1617852
End: 1620059
Strand: Reverse
Name: 83592711
Synonym: Rru_A1375
Alternate gene names: NA
Gene position: 1620059-1617852 (Counterclockwise)
Preceding gene: 83592712
Following gene: 83592710
Centisome position: 37.22
GC content: 64.99
Gene sequence:
>2208_bases ATGCTGCTGTTGAAGCCGCTTTTCACGGTCAACAAGGTCACGGTCTTCCCCGACCATGCCGATAAGGACACGTTCTATTA TCTGCCCGAAAACGTCGCCATCGCCAAGGACGGGGCGGGCAAGCCGCGGTTCCTGTTCTTGAAATACATGCGCGATCTGA CCGACAACGTGGCGTTCAAATCCGATCAGCAATTGGGCGGCGGCTTCGTCACCGTAACCGTCGATTGCGCCCTTGATGAC CAGACGCGCCGCGACATTATCTCGCGGGCAAGGCGCACGGGCAGTCTCAATCCCCAACTGGTCACCGCCCCCTTCCACGA GGGCACGGTACGCATCGTATCGCTTGATTCCGCCGCCGAGGCCGATCCGGCGAAGGCCCGCTTCGTCGAACGCGCCGAGG GCTCGACGGTGCCCTCGCTGTTTGGCGATCTGACGGCGACCTTTTCGCTGATGCTGTCGCAGGAAGGCGCGACCTTGATG GAAAAGGCCTTCGACGGCGGCGGCGGGCCGATCTGCGTGTTCTACGACATGAAATTCATGGCTCTGCGCCCGGCCTTCGA GGTGCGGGTCAAGGCCAATATGAAGCGCGTCTATGAAAGCTTCGAAGCCGGCTTATCGGCCCAATACATGGTCTTCCGCG TCGATATCGAAGCCCAGCTCGCCAAGCTCGAACAAGACCAGATCCTGAAGATCGAGGTTCTGACCTTCGCCGAGGACGAC AATACCCGCGCGGCCAAGGACGCGGCGATGGCCTTCCTCAAGGAACAGGTGATCAACCAGTTCTTCACGCCCGCGCTGCC GCTGCCGACCTCGGGCGGACGAAGCACCGATCCCTTGGCCGGGCTGGCCAGCGCCCTTGGCCTGGGCGGGCGAACCCTGG GCCAGGGGGCCGCCGCGACCCCAGCGGCTCCCGCCGCCCCGGCGGCCTCGGTCAGCCAGCCGGCGCAAGCGGCCAACACG CCGCCGGCCAATCCCCCCGGCCCGGCGACGGCGGGTACCACCCCCGCCGCCCTGGCCACCGGCGGCGCGGCCAATCCGGC CAGTGCGCCCGGCGCACCGATGGCGGCCCCCGCCGCCGGCGCGGCGGGCGGAGCGGCGGCGGGTGGCGGCGGCATGGCGG CCGGCGCCATGGTCGGCCTGCGCCTGCGCTATGTCCGCCAGGAGGAAATCAAGAATCTCGATCTGGTGTGGAAGGAATCC GGGCCGGTCGAACGCCAGCATACCCCCAATGGCACCTTCGGCGTTCTGCTCTCGGGCAAGGACCGCGCCGCCCATATGCG CAGCGTCGATCTTGATGATCCCTTCTTCAAGCGCATCCTGGTCGATGTGTCGGGCGGTGGCAATTGGGCCGAGGCGGCGT TGACGCTGTGCAAGGTTCACCTGGAATACGGCGATGACGGCCAGGGTCGCCCCCGCCATGTCGATGATCTGGAACTGCGG CCCAATGCCCAGGGAGTCATCGCTCCCCAGGTCTTCACCTGCTCGCTCGACCAACAGCGCTCGCTTGATGTGAAATACCG GCTCGACTTCTTTTTCGATGACACCCCGGCGATCCGCGCCAAGGCGGCCTTCCACCAAAGCCCGGTGATGACCCTGACCG GACCGGGCGGCACCATCGAGGTTCAGCCCAAGGCCCAGTTCGGCTTTATCGCCCTTGAAGCCGGTCTCGGCCTTGATTTC AAGGACTGGGGCGTCGCCCAGGTTCTGCTCAAGCTGGGCTATTCCGATCCGGCCAACGGCTTCACCTTCGAGGAAAGCTT CACGCTGAGCGAGGGCTCCCCCACCGCCCGGCTCAAGATCCGCACCATCGATCCGCTCAAGCTCGCCTGGTGGTATGAAC CGACCTATGTGCTGCCCGGCGGGCGCTCGTTGAGCGGACCACGGATCACCACCACCGATCCGACGGTGACCATCGAGATG CCTTGGCGCCAGTTGCTCGACGTCACCCTCGATCCCTTCGACCTCAGCGGCCTCAAGCGCATCGCCCTCGAAATCGACTA TATCGATCAGGACCATAACCATCAGTTCAAGAAGACCATCCGCGTCGATGATCCGGCGGCTTACATCGACCTCAAGGTGC CGATCCTTGATGAGAAACGCCAGACCTACCGCTACCGGGTCAACGCCGTGCAGGCGACCAACCAGCCGCTGCGCGGCCCC TGGGTCGATGCCGAGCCCGGCTTCAGCTTCATCCAGAAACCGGCCTGA
Upstream 100 bases:
>100_bases ACCGATGGCTCGCGCCGCTTCGAGCCAGACCGCGAGTCCGATAGCACCAAACTGGTTTTTTCGATCGTTTGATCCCCCTG TTCGCCGTGGGAGACACGCC
Downstream 100 bases:
>100_bases AGGAGCCTCCGATGACCAAGCGCGCGGTTGTGGCCGGCATCAATGATTACCGCAATTGGAACTCCGTTGGTTTTGGCAAT CTGTCGTGGTGCCTGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MLLLKPLFTVNKVTVFPDHADKDTFYYLPENVAIAKDGAGKPRFLFLKYMRDLTDNVAFKSDQQLGGGFVTVTVDCALDD QTRRDIISRARRTGSLNPQLVTAPFHEGTVRIVSLDSAAEADPAKARFVERAEGSTVPSLFGDLTATFSLMLSQEGATLM EKAFDGGGGPICVFYDMKFMALRPAFEVRVKANMKRVYESFEAGLSAQYMVFRVDIEAQLAKLEQDQILKIEVLTFAEDD NTRAAKDAAMAFLKEQVINQFFTPALPLPTSGGRSTDPLAGLASALGLGGRTLGQGAAATPAAPAAPAASVSQPAQAANT PPANPPGPATAGTTPAALATGGAANPASAPGAPMAAPAAGAAGGAAAGGGGMAAGAMVGLRLRYVRQEEIKNLDLVWKES GPVERQHTPNGTFGVLLSGKDRAAHMRSVDLDDPFFKRILVDVSGGGNWAEAALTLCKVHLEYGDDGQGRPRHVDDLELR PNAQGVIAPQVFTCSLDQQRSLDVKYRLDFFFDDTPAIRAKAAFHQSPVMTLTGPGGTIEVQPKAQFGFIALEAGLGLDF KDWGVAQVLLKLGYSDPANGFTFEESFTLSEGSPTARLKIRTIDPLKLAWWYEPTYVLPGGRSLSGPRITTTDPTVTIEM PWRQLLDVTLDPFDLSGLKRIALEIDYIDQDHNHQFKKTIRVDDPAAYIDLKVPILDEKRQTYRYRVNAVQATNQPLRGP WVDAEPGFSFIQKPA
Sequences:
>Translated_735_residues MLLLKPLFTVNKVTVFPDHADKDTFYYLPENVAIAKDGAGKPRFLFLKYMRDLTDNVAFKSDQQLGGGFVTVTVDCALDD QTRRDIISRARRTGSLNPQLVTAPFHEGTVRIVSLDSAAEADPAKARFVERAEGSTVPSLFGDLTATFSLMLSQEGATLM EKAFDGGGGPICVFYDMKFMALRPAFEVRVKANMKRVYESFEAGLSAQYMVFRVDIEAQLAKLEQDQILKIEVLTFAEDD NTRAAKDAAMAFLKEQVINQFFTPALPLPTSGGRSTDPLAGLASALGLGGRTLGQGAAATPAAPAAPAASVSQPAQAANT PPANPPGPATAGTTPAALATGGAANPASAPGAPMAAPAAGAAGGAAAGGGGMAAGAMVGLRLRYVRQEEIKNLDLVWKES GPVERQHTPNGTFGVLLSGKDRAAHMRSVDLDDPFFKRILVDVSGGGNWAEAALTLCKVHLEYGDDGQGRPRHVDDLELR PNAQGVIAPQVFTCSLDQQRSLDVKYRLDFFFDDTPAIRAKAAFHQSPVMTLTGPGGTIEVQPKAQFGFIALEAGLGLDF KDWGVAQVLLKLGYSDPANGFTFEESFTLSEGSPTARLKIRTIDPLKLAWWYEPTYVLPGGRSLSGPRITTTDPTVTIEM PWRQLLDVTLDPFDLSGLKRIALEIDYIDQDHNHQFKKTIRVDDPAAYIDLKVPILDEKRQTYRYRVNAVQATNQPLRGP WVDAEPGFSFIQKPA >Mature_735_residues MLLLKPLFTVNKVTVFPDHADKDTFYYLPENVAIAKDGAGKPRFLFLKYMRDLTDNVAFKSDQQLGGGFVTVTVDCALDD QTRRDIISRARRTGSLNPQLVTAPFHEGTVRIVSLDSAAEADPAKARFVERAEGSTVPSLFGDLTATFSLMLSQEGATLM EKAFDGGGGPICVFYDMKFMALRPAFEVRVKANMKRVYESFEAGLSAQYMVFRVDIEAQLAKLEQDQILKIEVLTFAEDD NTRAAKDAAMAFLKEQVINQFFTPALPLPTSGGRSTDPLAGLASALGLGGRTLGQGAAATPAAPAAPAASVSQPAQAANT PPANPPGPATAGTTPAALATGGAANPASAPGAPMAAPAAGAAGGAAAGGGGMAAGAMVGLRLRYVRQEEIKNLDLVWKES GPVERQHTPNGTFGVLLSGKDRAAHMRSVDLDDPFFKRILVDVSGGGNWAEAALTLCKVHLEYGDDGQGRPRHVDDLELR PNAQGVIAPQVFTCSLDQQRSLDVKYRLDFFFDDTPAIRAKAAFHQSPVMTLTGPGGTIEVQPKAQFGFIALEAGLGLDF KDWGVAQVLLKLGYSDPANGFTFEESFTLSEGSPTARLKIRTIDPLKLAWWYEPTYVLPGGRSLSGPRITTTDPTVTIEM PWRQLLDVTLDPFDLSGLKRIALEIDYIDQDHNHQFKKTIRVDDPAAYIDLKVPILDEKRQTYRYRVNAVQATNQPLRGP WVDAEPGFSFIQKPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79190; Mature: 79190
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLKPLFTVNKVTVFPDHADKDTFYYLPENVAIAKDGAGKPRFLFLKYMRDLTDNVAFK CEEECCCCEEEEEEECCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC SDQQLGGGFVTVTVDCALDDQTRRDIISRARRTGSLNPQLVTAPFHEGTVRIVSLDSAAE CCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCC ADPAKARFVERAEGSTVPSLFGDLTATFSLMLSQEGATLMEKAFDGGGGPICVFYDMKFM CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCEEEEECCEEE ALRPAFEVRVKANMKRVYESFEAGLSAQYMVFRVDIEAQLAKLEQDQILKIEVLTFAEDD EECCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHCCCCCEEEEEEEEEECCC NTRAAKDAAMAFLKEQVINQFFTPALPLPTSGGRSTDPLAGLASALGLGGRTLGQGAAAT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC PAAPAAPAASVSQPAQAANTPPANPPGPATAGTTPAALATGGAANPASAPGAPMAAPAAG CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC AAGGAAAGGGGMAAGAMVGLRLRYVRQEEIKNLDLVWKESGPVERQHTPNGTFGVLLSGK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCC DRAAHMRSVDLDDPFFKRILVDVSGGGNWAEAALTLCKVHLEYGDDGQGRPRHVDDLELR CCHHHEEECCCCCHHHEEEEEEECCCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEC PNAQGVIAPQVFTCSLDQQRSLDVKYRLDFFFDDTPAIRAKAAFHQSPVMTLTGPGGTIE CCCCCEECCEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCEEEEECCCCEEE VQPKAQFGFIALEAGLGLDFKDWGVAQVLLKLGYSDPANGFTFEESFTLSEGSPTARLKI ECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECEEEECCCCCCEEEEE RTIDPLKLAWWYEPTYVLPGGRSLSGPRITTTDPTVTIEMPWRQLLDVTLDPFDLSGLKR EEECCEEEEEEECCEEECCCCCCCCCCEEECCCCEEEEECCHHHHHHCCCCCCCCCCCEE IALEIDYIDQDHNHQFKKTIRVDDPAAYIDLKVPILDEKRQTYRYRVNAVQATNQPLRGP EEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCC WVDAEPGFSFIQKPA CCCCCCCHHHHCCCC >Mature Secondary Structure MLLLKPLFTVNKVTVFPDHADKDTFYYLPENVAIAKDGAGKPRFLFLKYMRDLTDNVAFK CEEECCCCEEEEEEECCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC SDQQLGGGFVTVTVDCALDDQTRRDIISRARRTGSLNPQLVTAPFHEGTVRIVSLDSAAE CCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCC ADPAKARFVERAEGSTVPSLFGDLTATFSLMLSQEGATLMEKAFDGGGGPICVFYDMKFM CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCEEEEECCEEE ALRPAFEVRVKANMKRVYESFEAGLSAQYMVFRVDIEAQLAKLEQDQILKIEVLTFAEDD EECCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHCCCCCEEEEEEEEEECCC NTRAAKDAAMAFLKEQVINQFFTPALPLPTSGGRSTDPLAGLASALGLGGRTLGQGAAAT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC PAAPAAPAASVSQPAQAANTPPANPPGPATAGTTPAALATGGAANPASAPGAPMAAPAAG CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC AAGGAAAGGGGMAAGAMVGLRLRYVRQEEIKNLDLVWKESGPVERQHTPNGTFGVLLSGK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCC DRAAHMRSVDLDDPFFKRILVDVSGGGNWAEAALTLCKVHLEYGDDGQGRPRHVDDLELR CCHHHEEECCCCCHHHEEEEEEECCCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEC PNAQGVIAPQVFTCSLDQQRSLDVKYRLDFFFDDTPAIRAKAAFHQSPVMTLTGPGGTIE CCCCCEECCEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCEEEEECCCCEEE VQPKAQFGFIALEAGLGLDFKDWGVAQVLLKLGYSDPANGFTFEESFTLSEGSPTARLKI ECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECEEEECCCCCCEEEEE RTIDPLKLAWWYEPTYVLPGGRSLSGPRITTTDPTVTIEMPWRQLLDVTLDPFDLSGLKR EEECCEEEEEEECCEEECCCCCCCCCCEEECCCCEEEEECCHHHHHHCCCCCCCCCCCEE IALEIDYIDQDHNHQFKKTIRVDDPAAYIDLKVPILDEKRQTYRYRVNAVQATNQPLRGP EEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCC WVDAEPGFSFIQKPA CCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA