| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592705
Identifier: 83592705
GI number: 83592705
Start: 1611725
End: 1614103
Strand: Reverse
Name: 83592705
Synonym: Rru_A1369
Alternate gene names: NA
Gene position: 1614103-1611725 (Counterclockwise)
Preceding gene: 83592706
Following gene: 83592704
Centisome position: 37.08
GC content: 60.53
Gene sequence:
>2379_bases ATGCTGAATTTCTATAATCATTTCATCGTGCCCGACGTTCCCGACGTGACGATCTTCCACGACGATCAGGACCCGACCCT GTTCTATATGCTCTCGGCCCGGCCCACGGTCGTCCGCGCCGAGGACGACACCCCGCTGTTCAACATGATCGCCTTCGCCC GCGACTTCAAAGCCCTGGCGACCGCCAGCCAGGAGCTTCCCCAGGGCGATCTGGAAGGCGGCCTGCTCGATATGACCGTC TCGCTTGAAGTCAGCGCCGCCGACCAGCAAAAGATCCGCGCCTTCATCCAGGGTCAGAAGGCCCCCTTCCTGCGCTTCCG ACCGATGCTGATGGCCAAGGGCCTGATCAGCGTGGCGCCGCTGACCGTCACCAAGCCGATCAAGCTGACCTATCCGACCT GGGTGGATGGCAAGGTCGATTTCAACATCATTCCCGGCGATATGCCCAGTTTCGTTAAGGCGCGCGGCGGATCGGACAAG CCGTCGCTGGTGCAGACCAACATAGCCTCCTATCAGGCCTTGCTGGGTCAGGAAGGGGTGCGCCTGCTGCGCTTCGCCCT GCAAAAGGGCGTCTGTCCGGGCACCTTGGCCTATGACGTGTCCTTCGTCGCCCGTATCCCCAAAATGTCGATCTCGATCA AGGGCAACGCCAAGGATGTTTATGAGGAGATCAAGACCCACACCACCGTGCGCGAGACCTATAGCGGCGGCGGCAAGACC TCGGTCTATCAGTTCCCGGCGGTCAATTCGTTAAGCGAAATGCGCTCGATGTTCGCCAGCCTCGATATCAAGATGTCGTT TGACGACTTCCGGCCCGACACCGCCGGCAGCTTGGAATCCGAGGCGACCAAGAAGATCGAGGAGGTCGCCCTGGATATCG CGCTCGATTATCTGAAGCAGCGCTTCTGTTCCCCGGGGTTCTCGCCCGGGCTCAAGGCCGAAAAGCTTGGCGTCGATCCG CTGTTCCACGATCCCAACAAGCCGGCCAACGCCCCGCCGATGCCCGCCAACCAGTTGTGGCTCAAGGACTTCAAGCAGGA GATGGAGGGCGAGCTTGATTTCAACATCACCGCCCAGACGACGACGACGATCAGGAAGTTCCCCAATGCCGGCCTTGATG CCGCCATCCCGCGCGCCGAGATCGAAAAGCGCATCGTCGAAGCCGATCTGTCCAAGCCGATCTTTTCGTTTCTGGATGTG CCGATCCGCGTCAACGCCGATTTCGAAGCCGATCCGATCGCCCAGATCAAGGTGTTCTGCGCCTATGACCAGACCGACGA GATCACCCATGTCCGCAAGACCGAACGCCAGACCTTCGATTTCGACACCGGCACCGAGAAGAAATTCTTCCGGGCGGTGA TGGCCAAACGCGCCGATGGCTCGCCCAAGGACAGTTTTTCCTATTCAGCCCAGATCGTTTATAAATCCAGCATCCCCGCC CAGGATGTCACGCCGGTCGAAACCACCGACCGCAGCCTGACCATCACCTATGAAAAGCTTTCTTGCGTCAATGTCCGCGC GCTGTGGGGGGCGATCCCGGCCGATGTAGTGCAAAGCGTCACCATCGCCTTCACCTACCCGGCCTTCCCGTCGCCGACCT CGACCAAGGAAATCATCTTGTCGCCGACGCACACCGAGGATGGCTGGTTCACCTATACGGGGGGCAACAAGTCGCTGGAT TATACCTATGAAACCAGCTTTTTGCTGACCAGCGGCAAGGTGATCAAGATGCCGCCGCAGACCAGCCAGCGCGACCGGCT GATCATCAACGCCCCCTTCATCGACAGCCTGGAGGTCGATTTCGTCGCCCAGGGCGATTTCAGCGGCGCCGGCACCCCCG ATGGGCGGCGCCTGACCTCGGTTCTGGTCGAAGTGACCTATGAGGACGCGGCCAATCACATCGCCACATCGACCCGGGGC ACCCTCAGCCAATCGGGCGAGCGTTGGACCTTCCGCCAGCGGCTGATCGATGGCGGCGCGCGAGCTTACAGCTACCGCGC CGATCTTCTTTATAGCGACGGCACCCGCGTCGAAGGCAAATCCATTCCCGGCGATGGCCGCTCGCTGGTCTTCGTCGGCG AAACCACCACCGATATCCTCGATGTCACCGTCGTTGCCAGCCTGATCGATTTCGCGGTCTATCGCATGGTAACGGTGATC CTCAGCTACGCCGATCCGGCCAATTCGGTGACCTCGCGCCAGATCATGAACTTCACCGCCGCCAATCTCGGCGAAACCCG GGTTTGGCGCATCGGCCTCAAGGACCCGGCCAAGACGCGATACTCCTATCAGATCATCGCCGCCGGCATCGATCCGGCCA AGAACAAGGCTTTGCCCTTGGCGACAAGCGACAATCCGGTGCTGATCATCGAGCTATAG
Upstream 100 bases:
>100_bases CGGGAGAGCGCGTTATCGCGGCGCAGCGCCTGATCCGCCCGGGAACGGCGCAAGGGGACCCACCCCGTTGCGCGCCCCTT TATAGTCCTGGAGACGTCCC
Downstream 100 bases:
>100_bases GCCCGCCTTTCCTGTTGTGCCCCCCGGCAAGGATCCCGACCATGGCCGACACCGTCGCGACCGTCCTCCAAGCCAGAACA CCACTCAAAGTGCGGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MLNFYNHFIVPDVPDVTIFHDDQDPTLFYMLSARPTVVRAEDDTPLFNMIAFARDFKALATASQELPQGDLEGGLLDMTV SLEVSAADQQKIRAFIQGQKAPFLRFRPMLMAKGLISVAPLTVTKPIKLTYPTWVDGKVDFNIIPGDMPSFVKARGGSDK PSLVQTNIASYQALLGQEGVRLLRFALQKGVCPGTLAYDVSFVARIPKMSISIKGNAKDVYEEIKTHTTVRETYSGGGKT SVYQFPAVNSLSEMRSMFASLDIKMSFDDFRPDTAGSLESEATKKIEEVALDIALDYLKQRFCSPGFSPGLKAEKLGVDP LFHDPNKPANAPPMPANQLWLKDFKQEMEGELDFNITAQTTTTIRKFPNAGLDAAIPRAEIEKRIVEADLSKPIFSFLDV PIRVNADFEADPIAQIKVFCAYDQTDEITHVRKTERQTFDFDTGTEKKFFRAVMAKRADGSPKDSFSYSAQIVYKSSIPA QDVTPVETTDRSLTITYEKLSCVNVRALWGAIPADVVQSVTIAFTYPAFPSPTSTKEIILSPTHTEDGWFTYTGGNKSLD YTYETSFLLTSGKVIKMPPQTSQRDRLIINAPFIDSLEVDFVAQGDFSGAGTPDGRRLTSVLVEVTYEDAANHIATSTRG TLSQSGERWTFRQRLIDGGARAYSYRADLLYSDGTRVEGKSIPGDGRSLVFVGETTTDILDVTVVASLIDFAVYRMVTVI LSYADPANSVTSRQIMNFTAANLGETRVWRIGLKDPAKTRYSYQIIAAGIDPAKNKALPLATSDNPVLIIEL
Sequences:
>Translated_792_residues MLNFYNHFIVPDVPDVTIFHDDQDPTLFYMLSARPTVVRAEDDTPLFNMIAFARDFKALATASQELPQGDLEGGLLDMTV SLEVSAADQQKIRAFIQGQKAPFLRFRPMLMAKGLISVAPLTVTKPIKLTYPTWVDGKVDFNIIPGDMPSFVKARGGSDK PSLVQTNIASYQALLGQEGVRLLRFALQKGVCPGTLAYDVSFVARIPKMSISIKGNAKDVYEEIKTHTTVRETYSGGGKT SVYQFPAVNSLSEMRSMFASLDIKMSFDDFRPDTAGSLESEATKKIEEVALDIALDYLKQRFCSPGFSPGLKAEKLGVDP LFHDPNKPANAPPMPANQLWLKDFKQEMEGELDFNITAQTTTTIRKFPNAGLDAAIPRAEIEKRIVEADLSKPIFSFLDV PIRVNADFEADPIAQIKVFCAYDQTDEITHVRKTERQTFDFDTGTEKKFFRAVMAKRADGSPKDSFSYSAQIVYKSSIPA QDVTPVETTDRSLTITYEKLSCVNVRALWGAIPADVVQSVTIAFTYPAFPSPTSTKEIILSPTHTEDGWFTYTGGNKSLD YTYETSFLLTSGKVIKMPPQTSQRDRLIINAPFIDSLEVDFVAQGDFSGAGTPDGRRLTSVLVEVTYEDAANHIATSTRG TLSQSGERWTFRQRLIDGGARAYSYRADLLYSDGTRVEGKSIPGDGRSLVFVGETTTDILDVTVVASLIDFAVYRMVTVI LSYADPANSVTSRQIMNFTAANLGETRVWRIGLKDPAKTRYSYQIIAAGIDPAKNKALPLATSDNPVLIIEL >Mature_792_residues MLNFYNHFIVPDVPDVTIFHDDQDPTLFYMLSARPTVVRAEDDTPLFNMIAFARDFKALATASQELPQGDLEGGLLDMTV SLEVSAADQQKIRAFIQGQKAPFLRFRPMLMAKGLISVAPLTVTKPIKLTYPTWVDGKVDFNIIPGDMPSFVKARGGSDK PSLVQTNIASYQALLGQEGVRLLRFALQKGVCPGTLAYDVSFVARIPKMSISIKGNAKDVYEEIKTHTTVRETYSGGGKT SVYQFPAVNSLSEMRSMFASLDIKMSFDDFRPDTAGSLESEATKKIEEVALDIALDYLKQRFCSPGFSPGLKAEKLGVDP LFHDPNKPANAPPMPANQLWLKDFKQEMEGELDFNITAQTTTTIRKFPNAGLDAAIPRAEIEKRIVEADLSKPIFSFLDV PIRVNADFEADPIAQIKVFCAYDQTDEITHVRKTERQTFDFDTGTEKKFFRAVMAKRADGSPKDSFSYSAQIVYKSSIPA QDVTPVETTDRSLTITYEKLSCVNVRALWGAIPADVVQSVTIAFTYPAFPSPTSTKEIILSPTHTEDGWFTYTGGNKSLD YTYETSFLLTSGKVIKMPPQTSQRDRLIINAPFIDSLEVDFVAQGDFSGAGTPDGRRLTSVLVEVTYEDAANHIATSTRG TLSQSGERWTFRQRLIDGGARAYSYRADLLYSDGTRVEGKSIPGDGRSLVFVGETTTDILDVTVVASLIDFAVYRMVTVI LSYADPANSVTSRQIMNFTAANLGETRVWRIGLKDPAKTRYSYQIIAAGIDPAKNKALPLATSDNPVLIIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87450; Mature: 87450
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFYNHFIVPDVPDVTIFHDDQDPTLFYMLSARPTVVRAEDDTPLFNMIAFARDFKALA CCCCCCCEECCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHH TASQELPQGDLEGGLLDMTVSLEVSAADQQKIRAFIQGQKAPFLRFRPMLMAKGLISVAP HHHHHCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCHHCCHHHHHCCHHHCCC LTVTKPIKLTYPTWVDGKVDFNIIPGDMPSFVKARGGSDKPSLVQTNIASYQALLGQEGV EEEECCEEEECCCEECCEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RLLRFALQKGVCPGTLAYDVSFVARIPKMSISIKGNAKDVYEEIKTHTTVRETYSGGGKT HHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCC SVYQFPAVNSLSEMRSMFASLDIKMSFDDFRPDTAGSLESEATKKIEEVALDIALDYLKQ EEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RFCSPGFSPGLKAEKLGVDPLFHDPNKPANAPPMPANQLWLKDFKQEMEGELDFNITAQT HHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC TTTIRKFPNAGLDAAIPRAEIEKRIVEADLSKPIFSFLDVPIRVNADFEADPIAQIKVFC HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCEEEEEEE AYDQTDEITHVRKTERQTFDFDTGTEKKFFRAVMAKRADGSPKDSFSYSAQIVYKSSIPA EECCCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCC QDVTPVETTDRSLTITYEKLSCVNVRALWGAIPADVVQSVTIAFTYPAFPSPTSTKEIIL CCCCCCCCCCCEEEEEEECCEEEEHHHHHCCCCHHHHCEEEEEEEECCCCCCCCCCEEEE SPTHTEDGWFTYTGGNKSLDYTYETSFLLTSGKVIKMPPQTSQRDRLIINAPFIDSLEVD ECCCCCCCEEEECCCCCCEEEEEEEEEEEECCEEEECCCCCCCCCEEEEECCCCCCCEEE FVAQGDFSGAGTPDGRRLTSVLVEVTYEDAANHIATSTRGTLSQSGERWTFRQRLIDGGA EEEECCCCCCCCCCCHHHEEHHEEEEHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHCCCC RAYSYRADLLYSDGTRVEGKSIPGDGRSLVFVGETTTDILDVTVVASLIDFAVYRMVTVI CEEEEEEEEEECCCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LSYADPANSVTSRQIMNFTAANLGETRVWRIGLKDPAKTRYSYQIIAAGIDPAKNKALPL HHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEE ATSDNPVLIIEL ECCCCCEEEEEC >Mature Secondary Structure MLNFYNHFIVPDVPDVTIFHDDQDPTLFYMLSARPTVVRAEDDTPLFNMIAFARDFKALA CCCCCCCEECCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHH TASQELPQGDLEGGLLDMTVSLEVSAADQQKIRAFIQGQKAPFLRFRPMLMAKGLISVAP HHHHHCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCHHCCHHHHHCCHHHCCC LTVTKPIKLTYPTWVDGKVDFNIIPGDMPSFVKARGGSDKPSLVQTNIASYQALLGQEGV EEEECCEEEECCCEECCEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH RLLRFALQKGVCPGTLAYDVSFVARIPKMSISIKGNAKDVYEEIKTHTTVRETYSGGGKT HHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCC SVYQFPAVNSLSEMRSMFASLDIKMSFDDFRPDTAGSLESEATKKIEEVALDIALDYLKQ EEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RFCSPGFSPGLKAEKLGVDPLFHDPNKPANAPPMPANQLWLKDFKQEMEGELDFNITAQT HHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC TTTIRKFPNAGLDAAIPRAEIEKRIVEADLSKPIFSFLDVPIRVNADFEADPIAQIKVFC HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCEEEEEEE AYDQTDEITHVRKTERQTFDFDTGTEKKFFRAVMAKRADGSPKDSFSYSAQIVYKSSIPA EECCCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCC QDVTPVETTDRSLTITYEKLSCVNVRALWGAIPADVVQSVTIAFTYPAFPSPTSTKEIIL CCCCCCCCCCCEEEEEEECCEEEEHHHHHCCCCHHHHCEEEEEEEECCCCCCCCCCEEEE SPTHTEDGWFTYTGGNKSLDYTYETSFLLTSGKVIKMPPQTSQRDRLIINAPFIDSLEVD ECCCCCCCEEEECCCCCCEEEEEEEEEEEECCEEEECCCCCCCCCEEEEECCCCCCCEEE FVAQGDFSGAGTPDGRRLTSVLVEVTYEDAANHIATSTRGTLSQSGERWTFRQRLIDGGA EEEECCCCCCCCCCCHHHEEHHEEEEHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHCCCC RAYSYRADLLYSDGTRVEGKSIPGDGRSLVFVGETTTDILDVTVVASLIDFAVYRMVTVI CEEEEEEEEEECCCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LSYADPANSVTSRQIMNFTAANLGETRVWRIGLKDPAKTRYSYQIIAAGIDPAKNKALPL HHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEE ATSDNPVLIIEL ECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA