| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592704
Identifier: 83592704
GI number: 83592704
Start: 1609440
End: 1611683
Strand: Reverse
Name: 83592704
Synonym: Rru_A1368
Alternate gene names: NA
Gene position: 1611683-1609440 (Counterclockwise)
Preceding gene: 83592705
Following gene: 83592703
Centisome position: 37.03
GC content: 67.6
Gene sequence:
>2244_bases ATGGCCGACACCGTCGCGACCGTCCTCCAAGCCAGAACACCACTCAAAGTGCGGTCGAGCCGCACCATGTCCCTGGCCAA GGCCCTGCTACCCAAGGATCTTTTCCTGCGCGTGCCGGTCCATCAGGCGGTCGGACCGGTGTTTGACACGCCGATCGATC CGGCGGCGGCGGTTCACGTCGGCATCGACGGCAAATCCTATTTCATCCCCGCCGTCCGCGTGGCCAAGCGCACAAGAACC AGCCCGGTTCCCGATGTGGTCTTCGACAAGCGGCCCGAGGGCACCTTTCTGGTGGTGGGGATCGAGCTTGTGCGGGGATC GGCGCCGCTCGAGGCCGAACCCTTCGTCATCGATCAGCTTGCCCTGGCGATCGCCGGGGCCGAGACCGTGCCGCTGGCCT TCGAGATCGACGACCGCCCGGCGGCAGGCGAAGCCATCCGCTCCCTGCAGTGCGCTGCCCAGGTCCCCGAAGCCCAGGTC GGGGTGCTGGTCGGCCTGATGCAAGGGAAGCCCGACCTGTGGTTCCGCCTGAGCGGGCGGATCCTGACCCAATTGCGCAT CGTTGAGCCGACACAGCCCTCCGGTCCCACCCCCCACCCGATCCCGCCCCTTCCTCGGCCGCCCCTTCCCCGCCCCCCCA ATCCCCGACCCATCCCCCATCGCCCCCCCGTGATCCGGCCCCACCGCCCTCTGATGACCGAGCTCGCCACCCCCCTGGAC TCCGCCGTCGCCCGGCGATCGCCCATCACGGTGACCAGGATGGCCGATGTCGCCGACCTGCACCGTGATCTCATCGTTCC AAAATGGCAGGAATACTGGCTCGCCTCGGTCATCCCGATCGCCAATACCACCACTCGGTTCGAGCAGCGCGAGGTCGTGC GCGCCTTCTCCACCCCCCAATCCTGCCCCGCCGTTTTCCCGACCGGCATCGCCGCCAACCGTCCGATTTATATCGAGGTG GCCAGCGGCTTCGACGGCGCCTTCGGCGTCGGCTGGCGCAGCGACGGCGAGATCGGCGACCTGCGCGAGGCGCCGCGCGG CGGCCAATATTACGTGCTCCCCGATGCCTATGGTCTGGCCTTCGATCGGGCGAGCGGCCTGCCGGCGGTCAGCGCCCTGT TGATCGCCACCGCCCCCGCCGGCGGACAGGGGGCAAGCGAACACAAGGTGCGGGTGCGCTTTGGTCTGGTCGCCTCCTTC GATCCGTTGCGCATCGAGCGGCTGCGCCAGCGCATGCGCGAGCGCGAAGGGGTGCCCTTCGCCGAGGTCGCCATCGGCGG CTATGACAGCGCGACCTTCGATCTGTTTCCGGTTCTGCAAATGTTGGGCGTCGACGAAGCCGCCGTGCCGGCCCCCGATC GGGCAAGGCCGGTCGATGCCAAAAACGGCTTCGATCTGACGATGGATCTGACGATCGAGCAATACAGCCTGCTGGTCCAG GCGCTTAAAACCGGCAGTCATCAGGCGGGCGTGGTGCGCTTCACCCTGACCGGCGAAAACGATACGCCCCTAACCCGCGA TATCGGCGTGCGCCTGTCGCTGACCCAACCGGCCGAACTGCCCCTTGATCTGGTATTCGAGGAGGGCGCCCCCGAGGATC CGCCCAATGAGATCACCATCAACAATGACGCCGACTGCGAGGTGAGCGTGGCCAAGGTCCTGCCCACCCTGATCGCGGCG ATGGATCAGCGCCCGGTGGCGGCTTATGACGCCAGCGCCAGCCCGCTGCCGATCACCATCCCGGCCAAAGGCAGCGTTCT GGTGACCTTGACGCCAACAGCCAATGATCCGCCGCCGGTCTGGAACAGTTTGGCCGCCGCTCTGGCCGGCGTCAGCGCCC GCTTCGAGGCCGAGGCGGTTCTCGGGCGCATCCACCAGCTTGCCGGAACCACCAGTCTGCTCTCGCGCGTCGTGGTGTCC TCCTGGGTCTTCGCCTCGGAAAGCCGCATCCCCGCCGCCCTGCGCGACGTGCTGTTTGGCATGGATGTCCAGCTTCGCCG CGGCGCCGACGAGGAGCCCGCCACCTTGACCCTGATGGTGGACGACGCCCGCAAGACCTTTGATTTCGCCTTCGGTCTTG CCGATATCCTGGCCGGCCAGACCCCCGATTTCCCCACCTTCGAATACCGCCAACGCAATCGCCGAACCACCGGCGAGGGC CCTTGGACGGCCTGGACGCGCTTTCGCGGCAATACCCTGGTCGTCAACCCCGAGCTTCCCGCCAGCCCGGCGCCAGAGGG CTGA
Upstream 100 bases:
>100_bases AGAACAAGGCTTTGCCCTTGGCGACAAGCGACAATCCGGTGCTGATCATCGAGCTATAGGCCCGCCTTTCCTGTTGTGCC CCCCGGCAAGGATCCCGACC
Downstream 100 bases:
>100_bases GCGGCGACCCTCAAAATAATAGAAATTCCAATTATACAGATGTAAGCTCAGCGAGCCCGGTTATGGGCAAGTCTGACACC CCCCTTGCGCCGGCGACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 747; Mature: 746
Protein sequence:
>747_residues MADTVATVLQARTPLKVRSSRTMSLAKALLPKDLFLRVPVHQAVGPVFDTPIDPAAAVHVGIDGKSYFIPAVRVAKRTRT SPVPDVVFDKRPEGTFLVVGIELVRGSAPLEAEPFVIDQLALAIAGAETVPLAFEIDDRPAAGEAIRSLQCAAQVPEAQV GVLVGLMQGKPDLWFRLSGRILTQLRIVEPTQPSGPTPHPIPPLPRPPLPRPPNPRPIPHRPPVIRPHRPLMTELATPLD SAVARRSPITVTRMADVADLHRDLIVPKWQEYWLASVIPIANTTTRFEQREVVRAFSTPQSCPAVFPTGIAANRPIYIEV ASGFDGAFGVGWRSDGEIGDLREAPRGGQYYVLPDAYGLAFDRASGLPAVSALLIATAPAGGQGASEHKVRVRFGLVASF DPLRIERLRQRMREREGVPFAEVAIGGYDSATFDLFPVLQMLGVDEAAVPAPDRARPVDAKNGFDLTMDLTIEQYSLLVQ ALKTGSHQAGVVRFTLTGENDTPLTRDIGVRLSLTQPAELPLDLVFEEGAPEDPPNEITINNDADCEVSVAKVLPTLIAA MDQRPVAAYDASASPLPITIPAKGSVLVTLTPTANDPPPVWNSLAAALAGVSARFEAEAVLGRIHQLAGTTSLLSRVVVS SWVFASESRIPAALRDVLFGMDVQLRRGADEEPATLTLMVDDARKTFDFAFGLADILAGQTPDFPTFEYRQRNRRTTGEG PWTAWTRFRGNTLVVNPELPASPAPEG
Sequences:
>Translated_747_residues MADTVATVLQARTPLKVRSSRTMSLAKALLPKDLFLRVPVHQAVGPVFDTPIDPAAAVHVGIDGKSYFIPAVRVAKRTRT SPVPDVVFDKRPEGTFLVVGIELVRGSAPLEAEPFVIDQLALAIAGAETVPLAFEIDDRPAAGEAIRSLQCAAQVPEAQV GVLVGLMQGKPDLWFRLSGRILTQLRIVEPTQPSGPTPHPIPPLPRPPLPRPPNPRPIPHRPPVIRPHRPLMTELATPLD SAVARRSPITVTRMADVADLHRDLIVPKWQEYWLASVIPIANTTTRFEQREVVRAFSTPQSCPAVFPTGIAANRPIYIEV ASGFDGAFGVGWRSDGEIGDLREAPRGGQYYVLPDAYGLAFDRASGLPAVSALLIATAPAGGQGASEHKVRVRFGLVASF DPLRIERLRQRMREREGVPFAEVAIGGYDSATFDLFPVLQMLGVDEAAVPAPDRARPVDAKNGFDLTMDLTIEQYSLLVQ ALKTGSHQAGVVRFTLTGENDTPLTRDIGVRLSLTQPAELPLDLVFEEGAPEDPPNEITINNDADCEVSVAKVLPTLIAA MDQRPVAAYDASASPLPITIPAKGSVLVTLTPTANDPPPVWNSLAAALAGVSARFEAEAVLGRIHQLAGTTSLLSRVVVS SWVFASESRIPAALRDVLFGMDVQLRRGADEEPATLTLMVDDARKTFDFAFGLADILAGQTPDFPTFEYRQRNRRTTGEG PWTAWTRFRGNTLVVNPELPASPAPEG >Mature_746_residues ADTVATVLQARTPLKVRSSRTMSLAKALLPKDLFLRVPVHQAVGPVFDTPIDPAAAVHVGIDGKSYFIPAVRVAKRTRTS PVPDVVFDKRPEGTFLVVGIELVRGSAPLEAEPFVIDQLALAIAGAETVPLAFEIDDRPAAGEAIRSLQCAAQVPEAQVG VLVGLMQGKPDLWFRLSGRILTQLRIVEPTQPSGPTPHPIPPLPRPPLPRPPNPRPIPHRPPVIRPHRPLMTELATPLDS AVARRSPITVTRMADVADLHRDLIVPKWQEYWLASVIPIANTTTRFEQREVVRAFSTPQSCPAVFPTGIAANRPIYIEVA SGFDGAFGVGWRSDGEIGDLREAPRGGQYYVLPDAYGLAFDRASGLPAVSALLIATAPAGGQGASEHKVRVRFGLVASFD PLRIERLRQRMREREGVPFAEVAIGGYDSATFDLFPVLQMLGVDEAAVPAPDRARPVDAKNGFDLTMDLTIEQYSLLVQA LKTGSHQAGVVRFTLTGENDTPLTRDIGVRLSLTQPAELPLDLVFEEGAPEDPPNEITINNDADCEVSVAKVLPTLIAAM DQRPVAAYDASASPLPITIPAKGSVLVTLTPTANDPPPVWNSLAAALAGVSARFEAEAVLGRIHQLAGTTSLLSRVVVSS WVFASESRIPAALRDVLFGMDVQLRRGADEEPATLTLMVDDARKTFDFAFGLADILAGQTPDFPTFEYRQRNRRTTGEGP WTAWTRFRGNTLVVNPELPASPAPEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80592; Mature: 80461
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTVATVLQARTPLKVRSSRTMSLAKALLPKDLFLRVPVHQAVGPVFDTPIDPAAAVHV CCHHHHHHHHCCCCCEECCCHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCEEEEE GIDGKSYFIPAVRVAKRTRTSPVPDVVFDKRPEGTFLVVGIELVRGSAPLEAEPFVIDQL ECCCCEEEHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHH ALAIAGAETVPLAFEIDDRPAAGEAIRSLQCAAQVPEAQVGVLVGLMQGKPDLWFRLSGR HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCEEEEECCE ILTQLRIVEPTQPSGPTPHPIPPLPRPPLPRPPNPRPIPHRPPVIRPHRPLMTELATPLD EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHH SAVARRSPITVTRMADVADLHRDLIVPKWQEYWLASVIPIANTTTRFEQREVVRAFSTPQ HHHHCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCC SCPAVFPTGIAANRPIYIEVASGFDGAFGVGWRSDGEIGDLREAPRGGQYYVLPDAYGLA CCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCHHHCCCCCCEEEECCCCCCCE FDRASGLPAVSALLIATAPAGGQGASEHKVRVRFGLVASFDPLRIERLRQRMREREGVPF ECCCCCCHHHHEEHEEECCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCE AEVAIGGYDSATFDLFPVLQMLGVDEAAVPAPDRARPVDAKNGFDLTMDLTIEQYSLLVQ EHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHH ALKTGSHQAGVVRFTLTGENDTPLTRDIGVRLSLTQPAELPLDLVFEEGAPEDPPNEITI HHHCCCCCCEEEEEEEECCCCCCCEEECCEEEEECCCCCCCEEEEEECCCCCCCCCEEEE NNDADCEVSVAKVLPTLIAAMDQRPVAAYDASASPLPITIPAKGSVLVTLTPTANDPPPV CCCCCCEEEHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCEEEEECCCCCCCCHH WNSLAAALAGVSARFEAEAVLGRIHQLAGTTSLLSRVVVSSWVFASESRIPAALRDVLFG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC MDVQLRRGADEEPATLTLMVDDARKTFDFAFGLADILAGQTPDFPTFEYRQRNRRTTGEG CCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC PWTAWTRFRGNTLVVNPELPASPAPEG CCEEEEEECCCEEEECCCCCCCCCCCC >Mature Secondary Structure ADTVATVLQARTPLKVRSSRTMSLAKALLPKDLFLRVPVHQAVGPVFDTPIDPAAAVHV CHHHHHHHHCCCCCEECCCHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCEEEEE GIDGKSYFIPAVRVAKRTRTSPVPDVVFDKRPEGTFLVVGIELVRGSAPLEAEPFVIDQL ECCCCEEEHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHH ALAIAGAETVPLAFEIDDRPAAGEAIRSLQCAAQVPEAQVGVLVGLMQGKPDLWFRLSGR HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCEEEEECCE ILTQLRIVEPTQPSGPTPHPIPPLPRPPLPRPPNPRPIPHRPPVIRPHRPLMTELATPLD EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHH SAVARRSPITVTRMADVADLHRDLIVPKWQEYWLASVIPIANTTTRFEQREVVRAFSTPQ HHHHCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCC SCPAVFPTGIAANRPIYIEVASGFDGAFGVGWRSDGEIGDLREAPRGGQYYVLPDAYGLA CCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCHHHCCCCCCEEEECCCCCCCE FDRASGLPAVSALLIATAPAGGQGASEHKVRVRFGLVASFDPLRIERLRQRMREREGVPF ECCCCCCHHHHEEHEEECCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCE AEVAIGGYDSATFDLFPVLQMLGVDEAAVPAPDRARPVDAKNGFDLTMDLTIEQYSLLVQ EHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHH ALKTGSHQAGVVRFTLTGENDTPLTRDIGVRLSLTQPAELPLDLVFEEGAPEDPPNEITI HHHCCCCCCEEEEEEEECCCCCCCEEECCEEEEECCCCCCCEEEEEECCCCCCCCCEEEE NNDADCEVSVAKVLPTLIAAMDQRPVAAYDASASPLPITIPAKGSVLVTLTPTANDPPPV CCCCCCEEEHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCEEEEECCCCCCCCHH WNSLAAALAGVSARFEAEAVLGRIHQLAGTTSLLSRVVVSSWVFASESRIPAALRDVLFG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC MDVQLRRGADEEPATLTLMVDDARKTFDFAFGLADILAGQTPDFPTFEYRQRNRRTTGEG CCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC PWTAWTRFRGNTLVVNPELPASPAPEG CCEEEEEECCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA