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The map label for this gene is rpiB [H]

Identifier: 83592695

GI number: 83592695

Start: 1600621

End: 1601097

Strand: Reverse

Name: rpiB [H]

Synonym: Rru_A1359

Alternate gene names: 83592695

Gene position: 1601097-1600621 (Counterclockwise)

Preceding gene: 83592696

Following gene: 83592694

Centisome position: 36.78

GC content: 63.94

Gene sequence:

>477_bases
ATGGCGGAAACCGCCAAGCCTAAAATCGTCGTCGGCGCCGATCACCTGGGGCGGGAGCTCAAGGATCTGCTGCGCGATCA
CCTGACCGCCCAAGGGTATGAGGTTTGCGACATGGGGACCGCCACCAGCGATCCCGTGGATTACCCCGATGTCGCCCTGC
CGGTCGCCCAGGCCATCGCCAAGGGGGACTTCGATCGCGGCATCCTGGTGTGCGGCACCGGCGCCGGTGTCTGCGTCAGC
GCCAACAAGGTGCCCGGGGTGATCGCCGTTCAGGTTAGCGATCCCTATACCGCCGAACGCGCCCGGGCCAGCAACAACGC
CCAGATCATCACCTTTGGCGCCCTGACCATCGGCCCGGCGACGGCCAAGGCCCTGACCGACATCTTCATGGCCGCCGAGT
TCCAAGGGGGCGGTTCGGCCAAGAAGGTTCAAAAGATGCTTGATATCGACCAGCATTACAAAAAGCTGGCCAGCTGA

Upstream 100 bases:

>100_bases
ATCCCGGCGCCATCTCGCTCGCCATCGTGCTGGCGGCGATGAGTTCCCACGTTCCCGCGCCCGCCGGCGCGGCGTGACCC
GATCATAGGAGATCCCTATC

Downstream 100 bases:

>100_bases
CCCCCCTATCGCCGATCCCGTCTTGTTCGAGGCCCGGCCGCCGAGAAGCGGCCGGATAGAGAAGGAGTTTGTCCGATGAA
CGCCCGATTGTGGATCGGAA

Product: ribose-5-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAETAKPKIVVGADHLGRELKDLLRDHLTAQGYEVCDMGTATSDPVDYPDVALPVAQAIAKGDFDRGILVCGTGAGVCVS
ANKVPGVIAVQVSDPYTAERARASNNAQIITFGALTIGPATAKALTDIFMAAEFQGGGSAKKVQKMLDIDQHYKKLAS

Sequences:

>Translated_158_residues
MAETAKPKIVVGADHLGRELKDLLRDHLTAQGYEVCDMGTATSDPVDYPDVALPVAQAIAKGDFDRGILVCGTGAGVCVS
ANKVPGVIAVQVSDPYTAERARASNNAQIITFGALTIGPATAKALTDIFMAAEFQGGGSAKKVQKMLDIDQHYKKLAS
>Mature_157_residues
AETAKPKIVVGADHLGRELKDLLRDHLTAQGYEVCDMGTATSDPVDYPDVALPVAQAIAKGDFDRGILVCGTGAGVCVSA
NKVPGVIAVQVSDPYTAERARASNNAQIITFGALTIGPATAKALTDIFMAAEFQGGGSAKKVQKMLDIDQHYKKLAS

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=144, Percent_Identity=40.9722222222222, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 16503; Mature: 16372

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETAKPKIVVGADHLGRELKDLLRDHLTAQGYEVCDMGTATSDPVDYPDVALPVAQAIA
CCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH
KGDFDRGILVCGTGAGVCVSANKVPGVIAVQVSDPYTAERARASNNAQIITFGALTIGPA
CCCCCCCEEEEECCCCEEEECCCCCEEEEEEECCCCCHHHHCCCCCCEEEEEECEEECCH
TAKALTDIFMAAEFQGGGSAKKVQKMLDIDQHYKKLAS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AETAKPKIVVGADHLGRELKDLLRDHLTAQGYEVCDMGTATSDPVDYPDVALPVAQAIA
CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH
KGDFDRGILVCGTGAGVCVSANKVPGVIAVQVSDPYTAERARASNNAQIITFGALTIGPA
CCCCCCCEEEEECCCCEEEECCCCCEEEEEEECCCCCHHHHCCCCCCEEEEEECEEECCH
TAKALTDIFMAAEFQGGGSAKKVQKMLDIDQHYKKLAS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]