| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yneB [C]
Identifier: 83592681
GI number: 83592681
Start: 1584827
End: 1585681
Strand: Direct
Name: yneB [C]
Synonym: Rru_A1345
Alternate gene names: 83592681
Gene position: 1584827-1585681 (Clockwise)
Preceding gene: 83592680
Following gene: 83592684
Centisome position: 36.41
GC content: 66.43
Gene sequence:
>855_bases ATGCCGCATATGTTGGGAAAACAAATCCGCCAGTCGCGGATCATCGATCCGAAAAGCCGGCGCGGCTTCTGCATCGCCTT CGATCACGCGCTGCAGCTGGGATCGTGCCAGGGCCTGGAGCGCCCCGAGGAGTCCCTTGATCAGATGGCCGAGGCCGGGG TGGATGCGGTGATCTTGCCCTTGGGCTCGGCGCTGACCTATGGGCCGCGACTGGTGGGCAACGGCGGCCCCAAGCTGATC TTGCGTCTGGATCAAACGACGATGTGGCGCGAGGGCACGCCCTTGGATTACGCCGACGGCCATACCCGTCTGGTCGCCTC CGTCGAAGACGCCGTGATGCTGGGCGCCGAGGCGGTGATCACCTATCTGTTCGTCGGTCACAACGATCCGGCCGAGGAAA CCGCCGCCTTTCGCGCCAATTCCGAGATCAACGCGGCGGCGCGCAAGATGGGCATCGTTCATATCATCGAAACCATGGGG GCGCGCCACGCCCTGGCCGCCAATGTCCATGATGGGGATTTCGTGCGCTTCCATTCGCGGATCGGCTGCGAGATGGGCGC CGATATCATCAAGACTGACTGGCCGGGCAGCGTCGCGGCGCTGCGTCAGATCACGGCGGAGCTGCCGGTTCCGGTGATGC TGGCCGGCGGGCCGGGGAACGGCGGCGACCGGGGAACCCTCGAACGGGTTCACCAGATCATGGAGGGCGGGGCGGCGGGC ATTTTGTTTGGCCGCTCGATCTTCCAGGCCCGCTCACCGCTGGCGGTGATGAAGGCCTGCCGGGCGATCATCCACGACCG CGCCTCGGTCGAGGAGGCAGCCGAGGGGGCAGGGGGATTGTCCGCCGCCGCCTGA
Upstream 100 bases:
>100_bases CGCCCTTCGCCCGCTCCCCGGCATCGCCAACCGCGACCCAAGCTGGCGATCGGCGATCCGCCGTCTGTTTGATCCTCGCT CCAGGGATGGAAGAAACATC
Downstream 100 bases:
>100_bases TCAGGGGGCGACGACGGTTTGCTTCATCTCAGACGGTCGATGGCTTGGCGGTGTTCGTGCATCATCAGGAAAACCCGGTA ATCCCGGGTGAAGCGTTCAA
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPHMLGKQIRQSRIIDPKSRRGFCIAFDHALQLGSCQGLERPEESLDQMAEAGVDAVILPLGSALTYGPRLVGNGGPKLI LRLDQTTMWREGTPLDYADGHTRLVASVEDAVMLGAEAVITYLFVGHNDPAEETAAFRANSEINAAARKMGIVHIIETMG ARHALAANVHDGDFVRFHSRIGCEMGADIIKTDWPGSVAALRQITAELPVPVMLAGGPGNGGDRGTLERVHQIMEGGAAG ILFGRSIFQARSPLAVMKACRAIIHDRASVEEAAEGAGGLSAAA
Sequences:
>Translated_284_residues MPHMLGKQIRQSRIIDPKSRRGFCIAFDHALQLGSCQGLERPEESLDQMAEAGVDAVILPLGSALTYGPRLVGNGGPKLI LRLDQTTMWREGTPLDYADGHTRLVASVEDAVMLGAEAVITYLFVGHNDPAEETAAFRANSEINAAARKMGIVHIIETMG ARHALAANVHDGDFVRFHSRIGCEMGADIIKTDWPGSVAALRQITAELPVPVMLAGGPGNGGDRGTLERVHQIMEGGAAG ILFGRSIFQARSPLAVMKACRAIIHDRASVEEAAEGAGGLSAAA >Mature_283_residues PHMLGKQIRQSRIIDPKSRRGFCIAFDHALQLGSCQGLERPEESLDQMAEAGVDAVILPLGSALTYGPRLVGNGGPKLIL RLDQTTMWREGTPLDYADGHTRLVASVEDAVMLGAEAVITYLFVGHNDPAEETAAFRANSEINAAARKMGIVHIIETMGA RHALAANVHDGDFVRFHSRIGCEMGADIIKTDWPGSVAALRQITAELPVPVMLAGGPGNGGDRGTLERVHQIMEGGAAGI LFGRSIFQARSPLAVMKACRAIIHDRASVEEAAEGAGGLSAAA
Specific function: Unknown
COG id: COG1830
COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoC/fbaB aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1787796, Length=271, Percent_Identity=30.2583025830258, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002915 [H]
Pfam domain/function: PF01791 DeoC [H]
EC number: 4.2.1.- [C]
Molecular weight: Translated: 30119; Mature: 29988
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHMLGKQIRQSRIIDPKSRRGFCIAFDHALQLGSCQGLERPEESLDQMAEAGVDAVILP CCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEE LGSALTYGPRLVGNGGPKLILRLDQTTMWREGTPLDYADGHTRLVASVEDAVMLGAEAVI CCCHHHCCCEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH TYLFVGHNDPAEETAAFRANSEINAAARKMGIVHIIETMGARHALAANVHDGDFVRFHSR HHHEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHHH IGCEMGADIIKTDWPGSVAALRQITAELPVPVMLAGGPGNGGDRGTLERVHQIMEGGAAG HCHHHCCCCEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHH ILFGRSIFQARSPLAVMKACRAIIHDRASVEEAAEGAGGLSAAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PHMLGKQIRQSRIIDPKSRRGFCIAFDHALQLGSCQGLERPEESLDQMAEAGVDAVILP CCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEE LGSALTYGPRLVGNGGPKLILRLDQTTMWREGTPLDYADGHTRLVASVEDAVMLGAEAVI CCCHHHCCCEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH TYLFVGHNDPAEETAAFRANSEINAAARKMGIVHIIETMGARHALAANVHDGDFVRFHSR HHHEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHHH IGCEMGADIIKTDWPGSVAALRQITAELPVPVMLAGGPGNGGDRGTLERVHQIMEGGAAG HCHHHCCCCEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHH ILFGRSIFQARSPLAVMKACRAIIHDRASVEEAAEGAGGLSAAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11427726 [H]