| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592636
Identifier: 83592636
GI number: 83592636
Start: 1533684
End: 1534478
Strand: Reverse
Name: 83592636
Synonym: Rru_A1300
Alternate gene names: NA
Gene position: 1534478-1533684 (Counterclockwise)
Preceding gene: 83592637
Following gene: 83592629
Centisome position: 35.25
GC content: 67.55
Gene sequence:
>795_bases GTGACCGCCGTCTATGATCTGATCGAAGGCGAGAGCCCGCTGATCGTCAGCATTCCCCATTGCGGCACCACCTTGCCGCC GGGGCTGATCGACCGGCTTTCGCCGCCTGCCCGCCTGTTGCCCGATACGGATTGGCATGTGGAGCGGCTTTATGATTTCG CCCGTGGCCTGGGGGCGACGGTGATCGCCGCCCGCTTGTCGCGCTTCGTCATCGACCTCAACCGCCCGGCCGATGGCGCC AGCCTTTATCCCGGTCAGGCGACGACCGGATTATGCCCGACCACCTTGTTTAGCGGCGTGCCGCTCTATCTGCCGGGCGC CGAGCCGACGCCGACCGAGATCGCCGCCCGGGTGGAAAACTACTGGCGACCCTATCACCGGGCCCTGGCCGGCGAACTGG CCCGCCTCAAGGCCCGTCACGGCCATGCGATTTTGTATGACGCCCATTCGATCCGGGCCGAGGTTCCCCGGCTGTTCGAG GGCCGCCTGCCCGACCTCAACCTGGGAACCGCCGGCGGCGCCAGCCTAAGCCCGGCCTTTGCCCCCTTGCTCGACGACTG GCGCGGCGAGGCCGAGGCGGCGGGGTTCACCACCGTGCTCAACGGCCGCTTCATCGGCGGCCATATCACCCGCGCCTATG GTCAGCCGGCCGACAACATCCATGCCCTGCAGATGGAACTGGTTCAGCAGCGCTATATGGACGAGGAAAGCTACGCCTAT CTGCCCGAGCGCGCCGATCGCCTGCGCCCGCTGCTCCACCGCCTGCTGGACCAACTGATCGCGTGGCGGCCCTAA
Upstream 100 bases:
>100_bases CTGGAAGCCATCGCCCACCTGATCGGCGAAGGCCGCTTCGACGCCCTGGTCCCGGTCGATCTGTCGACCCTGGGATCGGT CTGAAAAGGAACCTCCCCCC
Downstream 100 bases:
>100_bases AAGGGTTACAGGAAAATCTTTCCCGGGTTCATCAGGCCCTTTGGATCAAGCGCCGCCTTGATCTGACGCATGACATCGAC GCCCTCGCCAGCCTCAAGGG
Product: N-formylglutamate deformylase
Products: formate; L-glutamate
Alternate protein names: N-Formylglutamate Deformylase; Hydrolase; N-Formylglutamate Amidohydrolase Family Protein; Formiminoglutamase; N-Formylglutamate Amidohydrolase Superfamily; Formylglutamate Amidohydrolase; Formiminoglutamase Protein; N-Formylglutamate Amidohydrolase Family; Amidohydrolase; N-Formylglutamate Amidohydrolase HutG; Histidine Degradation; HutG Protein; N-Formylglutamate Deformylase Family Protein; Formylglutamte Amindohyrolase; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate_deformylase Protein
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTAVYDLIEGESPLIVSIPHCGTTLPPGLIDRLSPPARLLPDTDWHVERLYDFARGLGATVIAARLSRFVIDLNRPADGA SLYPGQATTGLCPTTLFSGVPLYLPGAEPTPTEIAARVENYWRPYHRALAGELARLKARHGHAILYDAHSIRAEVPRLFE GRLPDLNLGTAGGASLSPAFAPLLDDWRGEAEAAGFTTVLNGRFIGGHITRAYGQPADNIHALQMELVQQRYMDEESYAY LPERADRLRPLLHRLLDQLIAWRP
Sequences:
>Translated_264_residues MTAVYDLIEGESPLIVSIPHCGTTLPPGLIDRLSPPARLLPDTDWHVERLYDFARGLGATVIAARLSRFVIDLNRPADGA SLYPGQATTGLCPTTLFSGVPLYLPGAEPTPTEIAARVENYWRPYHRALAGELARLKARHGHAILYDAHSIRAEVPRLFE GRLPDLNLGTAGGASLSPAFAPLLDDWRGEAEAAGFTTVLNGRFIGGHITRAYGQPADNIHALQMELVQQRYMDEESYAY LPERADRLRPLLHRLLDQLIAWRP >Mature_263_residues TAVYDLIEGESPLIVSIPHCGTTLPPGLIDRLSPPARLLPDTDWHVERLYDFARGLGATVIAARLSRFVIDLNRPADGAS LYPGQATTGLCPTTLFSGVPLYLPGAEPTPTEIAARVENYWRPYHRALAGELARLKARHGHAILYDAHSIRAEVPRLFEG RLPDLNLGTAGGASLSPAFAPLLDDWRGEAEAAGFTTVLNGRFIGGHITRAYGQPADNIHALQMELVQQRYMDEESYAYL PERADRLRPLLHRLLDQLIAWRP
Specific function: Unknown
COG id: COG3741
COG function: function code E; N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.1.68
Molecular weight: Translated: 29102; Mature: 28970
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVYDLIEGESPLIVSIPHCGTTLPPGLIDRLSPPARLLPDTDWHVERLYDFARGLGAT CCHHHHHHCCCCCEEEECCCCCCCCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHH VIAARLSRFVIDLNRPADGASLYPGQATTGLCPTTLFSGVPLYLPGAEPTPTEIAARVEN HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHH YWRPYHRALAGELARLKARHGHAILYDAHSIRAEVPRLFEGRLPDLNLGTAGGASLSPAF HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH APLLDDWRGEAEAAGFTTVLNGRFIGGHITRAYGQPADNIHALQMELVQQRYMDEESYAY HHHHHHHCCCCHHCCCCCEECCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH LPERADRLRPLLHRLLDQLIAWRP CHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAVYDLIEGESPLIVSIPHCGTTLPPGLIDRLSPPARLLPDTDWHVERLYDFARGLGAT CHHHHHHCCCCCEEEECCCCCCCCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHH VIAARLSRFVIDLNRPADGASLYPGQATTGLCPTTLFSGVPLYLPGAEPTPTEIAARVEN HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHH YWRPYHRALAGELARLKARHGHAILYDAHSIRAEVPRLFEGRLPDLNLGTAGGASLSPAF HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH APLLDDWRGEAEAAGFTTVLNGRFIGGHITRAYGQPADNIHALQMELVQQRYMDEESYAY HHHHHHHCCCCHHCCCCCEECCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH LPERADRLRPLLHRLLDQLIAWRP CHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-formyl-L-glutamate; H2O
Specific reaction: N-formyl-L-glutamate + H2O = formate + L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA