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The map label for this gene is yvaQ [H]

Identifier: 83592629

GI number: 83592629

Start: 1526396

End: 1528084

Strand: Reverse

Name: yvaQ [H]

Synonym: Rru_A1293

Alternate gene names: 83592629

Gene position: 1528084-1526396 (Counterclockwise)

Preceding gene: 83592636

Following gene: 83592618

Centisome position: 35.11

GC content: 63.88

Gene sequence:

>1689_bases
ATGTCATTCATCAATAATCTGCGCATCCCGCAAAAGCTGCTGATCGCCTTTTGCAGCCTCGCGCTGCTGTTCGTCGGCGC
CGGCATCATCTCGTTGGTCCAGCTTCGCGCCGTTTCGGGCGCGACCGAGATCATCGTCGAAAACTGGTTGCCCTCGATCA
GAGCCCTGGCCGCCCTTGAACTCCAGGTCATCGAACACCGACGGTTTGAGATGTCCCATATCATGACCACCGACGCCCCG
GGCATGGCCGCCGAGGACGAGCGGATTCGCAAACAGCGGGAGTTGATCGCCAAGACCCAGGCGACCTATGAAAAACTGAT
CAACAGCGCGGAAGAGCGGGCGATTTACGATCGGTTCGCGACGCAATGGACCACCTATCTGGCCCTGACCGAGCAGGTCA
TCGAGCTGTCGCGGACCAATAAGAACACCGAGGCCCGCGACATGCAGTTGGGCGAGAGCCGCGCCGCTTTCAACCAAATG
CGCGCGGCGCTCGTCGAAGCGATCGACCTCAATAACAAGGGCGCCAAAAAAGCGGCGGAAGAGGCCTATCAGAGCGACTC
CGACGCCCAGGTCTTGATCATCACCGTCACCGTCGTCATCCTCGGCTTGGTGGTTTTCTTCACCTTGCTGCTGCGCGCCG
CCATCGCCAAGCCGATCGTTTCGATCACCACCATCATGCGGCGGCTGGCCGAGGGCGAAAGGACGATCGACATCCCCGCC
CGCGACCGCAAGGACGAAATCGGCGACATGGCCGGGGCGGTGGAGGTGTTCAAGGATAACGCCATCCGCGCCGAACAGCT
TGAAAACGAACAGCGGGCCGAGCGCGCCAATCGGGAGAAACGCAGCCAGACCATCGAGACCCTGATGGGGACCTTCGACC
GGGCGGTGGGCAATGTGTTGGCGGTGGTGGCCGGAGCGGCGACCGAAATGGAAAGCACCGCCCAGGCGATGACCTCGAAC
GCCGAGCAGACCAGTCGTCAGGCGATCGCCGTCTCGTCCGCCACCGAAGAAGCCTCGGCCGGGGTGCAGACAGTGGCCTC
GGCCTCGGAGGAACTGGCCGCCTCGATCAGCGAGATCGGCCGTCAGGTCGAACAATCGAATGCCGCCTCGCGTCTCGCCT
CCGAGGAGGCCGCCCGCGCCAGCGTCACCGTTTCGGGTCTGGCCGAGACCTCGACGCGCATTGGCACCGTCGTCGGTCTA
ATCACCCATATCGCCAATCAAACCAATCTTCTGGCGCTCAACGCCACCATCGAGGCGGCCCGGGCCGGCGATGCCGGCAA
GGGCTTCGCCGTGGTCGCCGGCGAAGTGAAATCCCTGGCCAATCAGACGGCCAAGGCCACCGAGGAAATCAGCGCCCAGA
TCGGCGCCGTCCAGCAGGCGACCCAACAGGCGGTCGAAGCCATCGCCACCATCGTCCGACGCATCGAGGAAACCACCCAT
ATCTCGACGGCCATCGCCTCGGCGGTCGAGGAACAGGCCGCCGCCACCAATGAAATCGCCCAGAATGTGCAAAGGGTGGC
CGCCGGAACCCAAGAGGTTTCGGCCAGCATCGGCGGCGTGACCCAGGCCGCCGACGAAACCGGCGGCGCCGCCCAGCAGG
TCCTCTCGGCCGCCCAATCGCTCTCGCGCGAATCCGCCGAGTTGAAGGAGATGGTCGATCACTTTTTGCGCGACGTGCGC
AGCGCGTAA

Upstream 100 bases:

>100_bases
ATGTCGTATCCCTATAATCGTACCCCTAAGTCTAGGTCTGGACACTCTGGCCCGGGGACCACCTCCCTGGCCACACCCGC
CTAACGCGAGGACGAGGGGC

Downstream 100 bases:

>100_bases
ATAAAGACCGGCGCAGCGCGTAAACAAAGACGTGCGCAGCGCGTGAAGAAAGACCTGCGCGGCTTGCTCTAGCCGCGCAG
GGCCGCCAGCGGCGACTGCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSFINNLRIPQKLLIAFCSLALLFVGAGIISLVQLRAVSGATEIIVENWLPSIRALAALELQVIEHRRFEMSHIMTTDAP
GMAAEDERIRKQRELIAKTQATYEKLINSAEERAIYDRFATQWTTYLALTEQVIELSRTNKNTEARDMQLGESRAAFNQM
RAALVEAIDLNNKGAKKAAEEAYQSDSDAQVLIITVTVVILGLVVFFTLLLRAAIAKPIVSITTIMRRLAEGERTIDIPA
RDRKDEIGDMAGAVEVFKDNAIRAEQLENEQRAERANREKRSQTIETLMGTFDRAVGNVLAVVAGAATEMESTAQAMTSN
AEQTSRQAIAVSSATEEASAGVQTVASASEELAASISEIGRQVEQSNAASRLASEEAARASVTVSGLAETSTRIGTVVGL
ITHIANQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTAKATEEISAQIGAVQQATQQAVEAIATIVRRIEETTH
ISTAIASAVEEQAAATNEIAQNVQRVAAGTQEVSASIGGVTQAADETGGAAQQVLSAAQSLSRESAELKEMVDHFLRDVR
SA

Sequences:

>Translated_562_residues
MSFINNLRIPQKLLIAFCSLALLFVGAGIISLVQLRAVSGATEIIVENWLPSIRALAALELQVIEHRRFEMSHIMTTDAP
GMAAEDERIRKQRELIAKTQATYEKLINSAEERAIYDRFATQWTTYLALTEQVIELSRTNKNTEARDMQLGESRAAFNQM
RAALVEAIDLNNKGAKKAAEEAYQSDSDAQVLIITVTVVILGLVVFFTLLLRAAIAKPIVSITTIMRRLAEGERTIDIPA
RDRKDEIGDMAGAVEVFKDNAIRAEQLENEQRAERANREKRSQTIETLMGTFDRAVGNVLAVVAGAATEMESTAQAMTSN
AEQTSRQAIAVSSATEEASAGVQTVASASEELAASISEIGRQVEQSNAASRLASEEAARASVTVSGLAETSTRIGTVVGL
ITHIANQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTAKATEEISAQIGAVQQATQQAVEAIATIVRRIEETTH
ISTAIASAVEEQAAATNEIAQNVQRVAAGTQEVSASIGGVTQAADETGGAAQQVLSAAQSLSRESAELKEMVDHFLRDVR
SA
>Mature_561_residues
SFINNLRIPQKLLIAFCSLALLFVGAGIISLVQLRAVSGATEIIVENWLPSIRALAALELQVIEHRRFEMSHIMTTDAPG
MAAEDERIRKQRELIAKTQATYEKLINSAEERAIYDRFATQWTTYLALTEQVIELSRTNKNTEARDMQLGESRAAFNQMR
AALVEAIDLNNKGAKKAAEEAYQSDSDAQVLIITVTVVILGLVVFFTLLLRAAIAKPIVSITTIMRRLAEGERTIDIPAR
DRKDEIGDMAGAVEVFKDNAIRAEQLENEQRAERANREKRSQTIETLMGTFDRAVGNVLAVVAGAATEMESTAQAMTSNA
EQTSRQAIAVSSATEEASAGVQTVASASEELAASISEIGRQVEQSNAASRLASEEAARASVTVSGLAETSTRIGTVVGLI
THIANQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTAKATEEISAQIGAVQQATQQAVEAIATIVRRIEETTHI
STAIASAVEEQAAATNEIAQNVQRVAAGTQEVSASIGGVTQAADETGGAAQQVLSAAQSLSRESAELKEMVDHFLRDVRS
A

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=412, Percent_Identity=28.6407766990291, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI2367378, Length=425, Percent_Identity=26.8235294117647, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1788195, Length=240, Percent_Identity=31.25, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1788194, Length=196, Percent_Identity=36.2244897959184, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI1789453, Length=364, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 60044; Mature: 59913

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFINNLRIPQKLLIAFCSLALLFVGAGIISLVQLRAVSGATEIIVENWLPSIRALAALE
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LQVIEHRRFEMSHIMTTDAPGMAAEDERIRKQRELIAKTQATYEKLINSAEERAIYDRFA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQWTTYLALTEQVIELSRTNKNTEARDMQLGESRAAFNQMRAALVEAIDLNNKGAKKAAE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EAYQSDSDAQVLIITVTVVILGLVVFFTLLLRAAIAKPIVSITTIMRRLAEGERTIDIPA
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
RDRKDEIGDMAGAVEVFKDNAIRAEQLENEQRAERANREKRSQTIETLMGTFDRAVGNVL
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVAGAATEMESTAQAMTSNAEQTSRQAIAVSSATEEASAGVQTVASASEELAASISEIG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQVEQSNAASRLASEEAARASVTVSGLAETSTRIGTVVGLITHIANQTNLLALNATIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHH
RAGDAGKGFAVVAGEVKSLANQTAKATEEISAQIGAVQQATQQAVEAIATIVRRIEETTH
HCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISTAIASAVEEQAAATNEIAQNVQRVAAGTQEVSASIGGVTQAADETGGAAQQVLSAAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH
LSRESAELKEMVDHFLRDVRSA
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFINNLRIPQKLLIAFCSLALLFVGAGIISLVQLRAVSGATEIIVENWLPSIRALAALE
CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LQVIEHRRFEMSHIMTTDAPGMAAEDERIRKQRELIAKTQATYEKLINSAEERAIYDRFA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQWTTYLALTEQVIELSRTNKNTEARDMQLGESRAAFNQMRAALVEAIDLNNKGAKKAAE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
EAYQSDSDAQVLIITVTVVILGLVVFFTLLLRAAIAKPIVSITTIMRRLAEGERTIDIPA
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
RDRKDEIGDMAGAVEVFKDNAIRAEQLENEQRAERANREKRSQTIETLMGTFDRAVGNVL
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVAGAATEMESTAQAMTSNAEQTSRQAIAVSSATEEASAGVQTVASASEELAASISEIG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQVEQSNAASRLASEEAARASVTVSGLAETSTRIGTVVGLITHIANQTNLLALNATIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHH
RAGDAGKGFAVVAGEVKSLANQTAKATEEISAQIGAVQQATQQAVEAIATIVRRIEETTH
HCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISTAIASAVEEQAAATNEIAQNVQRVAAGTQEVSASIGGVTQAADETGGAAQQVLSAAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH
LSRESAELKEMVDHFLRDVRSA
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]