| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592626
Identifier: 83592626
GI number: 83592626
Start: 1523931
End: 1524395
Strand: Direct
Name: 83592626
Synonym: Rru_A1290
Alternate gene names: NA
Gene position: 1523931-1524395 (Clockwise)
Preceding gene: 83592625
Following gene: 83592627
Centisome position: 35.01
GC content: 63.44
Gene sequence:
>465_bases ATGACCACAGGGCCGCTGTTTCCCCGCCGCCGCCTGCTGCGTCTGGCCTGTCTCCTCCCGCTTGCCGCCCTGGCGCGCCC CCTGCGGGCCTTTGCCGGAGAAGCCTTGGCGTTCAAGGAGTTGTATGGCTCAATTGGCGTGCTGGGGTTGACTTTTTCGG ACAAGGTCAAGGCCCTGGCCGGTCAAACGGTGACCATGCGCGGCTTCATGGCGCCGCCCTTGAAGGCCGAGGCCAAGTTT TTTGTCTTAAGCGAAATCCCGATGTCGATCTGCCCCTTTTGTTCGTCGGATGCCGATTGGCCCGACACGATCGTCGTCGT CACCCTCGATCACGCCCAAACCTTCACCCAGGCCAATGCGCCGATCGAGGTGACCGGGCGGCTTGACGTCGGCTCGTGGA CCGATCCCGAGACCGGCTTTGTCAGCCTGCTGCGGCTGACCGGCGCCTCCTTTCGCAAGGTTTGA
Upstream 100 bases:
>100_bases CGCTCCGGCGAAAAAGTAAGGCGCGCCGCGTTTCGATCTTCGGGCGTCCGGCGGCCTTCGCCGCCGGGCGTCGCCCTCCT GGCCGAAAGGGGTTCGTTTC
Downstream 100 bases:
>100_bases TCATGCCGCTGCTGACCATCCGTGATCTTGACGTGCGCTTTCCCGGCCTGGGCCGACCGGCGCTTTTCCTGCCCGCCCTG ACCCTGGAGGCCGGGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTTGPLFPRRRLLRLACLLPLAALARPLRAFAGEALAFKELYGSIGVLGLTFSDKVKALAGQTVTMRGFMAPPLKAEAKF FVLSEIPMSICPFCSSDADWPDTIVVVTLDHAQTFTQANAPIEVTGRLDVGSWTDPETGFVSLLRLTGASFRKV
Sequences:
>Translated_154_residues MTTGPLFPRRRLLRLACLLPLAALARPLRAFAGEALAFKELYGSIGVLGLTFSDKVKALAGQTVTMRGFMAPPLKAEAKF FVLSEIPMSICPFCSSDADWPDTIVVVTLDHAQTFTQANAPIEVTGRLDVGSWTDPETGFVSLLRLTGASFRKV >Mature_153_residues TTGPLFPRRRLLRLACLLPLAALARPLRAFAGEALAFKELYGSIGVLGLTFSDKVKALAGQTVTMRGFMAPPLKAEAKFF VLSEIPMSICPFCSSDADWPDTIVVVTLDHAQTFTQANAPIEVTGRLDVGSWTDPETGFVSLLRLTGASFRKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16660; Mature: 16529
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGPLFPRRRLLRLACLLPLAALARPLRAFAGEALAFKELYGSIGVLGLTFSDKVKALA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECHHHHHHHHH GQTVTMRGFMAPPLKAEAKFFVLSEIPMSICPFCSSDADWPDTIVVVTLDHAQTFTQANA CCEEEECCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCEEEEEEECCCHHHHHCCC PIEVTGRLDVGSWTDPETGFVSLLRLTGASFRKV CEEEEEEEECCCCCCCCHHHHHHHHHHCCHHCCC >Mature Secondary Structure TTGPLFPRRRLLRLACLLPLAALARPLRAFAGEALAFKELYGSIGVLGLTFSDKVKALA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECHHHHHHHHH GQTVTMRGFMAPPLKAEAKFFVLSEIPMSICPFCSSDADWPDTIVVVTLDHAQTFTQANA CCEEEECCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCEEEEEEECCCHHHHHCCC PIEVTGRLDVGSWTDPETGFVSLLRLTGASFRKV CEEEEEEEECCCCCCCCHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA