| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is phoA [H]
Identifier: 83592625
GI number: 83592625
Start: 1522107
End: 1523849
Strand: Direct
Name: phoA [H]
Synonym: Rru_A1289
Alternate gene names: 83592625
Gene position: 1522107-1523849 (Clockwise)
Preceding gene: 83592624
Following gene: 83592626
Centisome position: 34.97
GC content: 63.51
Gene sequence:
>1743_bases ATGCGGACCCTTTGCGCGACCTTGATGCTCACCACCTGCCTGGGCACCGCCGCCCAGGCCGCCACCGTCTATCCGCTCGA TCGGGCGACGATCCTCGCCGGCTCGCCCTTCGATCTGAAAGTCGAGTTCGACGGGGCCGTCAAAGCCGCCGACGTGACGG TGACCATCAATGGTCAGCCCGCCGCCAAGGTGTTGGGCAAGGACGTTCAGTTCGTCGAAAAGGAAGCGGGCACCGAGGCC TCGGCCGTACTGATCCGCGCCGCCACCCTGGCCAAGCCGGGCTCCTATACCCTGACCGCCAGCGCCGGGGCGGACACCAA AAGCGTCACCTGGGATGTTTACGGCACGCCGGCGACGGCCAAGGCCAAGAACGTCATCTTCTTCCTGGGCGACGGCCTGT CGGTGGCCCACCGCACCGGCGCCCGCCTGATGTCCAAGGGCATGACCGAGGGCAAGGCCAACGGCCGCCTGAACATGGAC GACCTCGACCATATGGCCTTCATCGGCACCTCGGCGACCAATGCCGTCGCCACCGATAGCGCCAATACCATGTCGGCCTA TATGACCGGCCACAAGACGGCGGTGAACGCCCTTGGCGTCTATGCCGACCGCACCGAGGACAGCCTGGACGATCCCCGCG TCGAGACCATTGCCGAGGCCCTGCGCCGCACCACCACGAAGTCGATCGGCGTCGTGGCGATGTCCGAGCTTGAAGACGCC ACCCCGGCCGCCGTTTTCGCCCATACCCGCAAGCGGGCCGATAAGGCCAAGATCACCGAGATGATCTTCGATCTGAAACC CGACGTGCTGCTCGGCGGCGGCTCGGCCTTCTTCCTGCCCAAAAGCGTCCCCGGTTCCAAGCGCAAGGACGACAAGGACT ATGTCGCCGCGTTCAAGGACGCGGGCTATACCGTGGCGACCTCGGCCAGCGAACTGGAAGCCGCCAAGGGCACCAATAGC GGCAAGATCCTGGGCCTTTTCCACACCGGCAATATGGATACCTATCTCGATCGCGTGCAGTTGAAGAAGGGCACCGTCGG CAAGTTCCCCGACCAGCCCGGTCTGGTCGAGATGACCACCGTCGCCCTGGGCCAGCTTGCCAAGAACCCGGACGGCTTCT TCCTGATGGTCGAAGGCTCGTCGATCGACAAGATGGCCCATCCGATGGATTGGGAACGCTCGATGGTCGAGACCATCGAA TTCGATCAGGCGATCGGCGTCGCCCGCGAGTTCGTCAAAACCCATCCCGATACGCTGATCGTCGTCACCGGCGACCATAC CCACGGCGTGTCGATCATCGGCACCATCGACGATAACAAGCCCGGTGCCGAGATGCGCGACAAGGTCGGCACCTATGCCG ATGCCGGTTTCCCCAATTACACCGACGAAAACAAGGACGGCTATCCCGACCGCGTCGATGTCTCGCGCCGTCTGGCGATC TTCTCGAGCAATTTCCCCGATTACTACGAAACCTTCCAGCCCAAGCTCGATGGCCCCTTCGTTCCCGCCATTCAGAACGA GAAGAAGGAATACGTCGCCAACGAGGCCTATAAGTCGGTTCCCGGCGCCGTGTTGCGCATCGGCAATCTGCCGCGCAGCG AAGACACCGCCGTCCATGCCGTCGACGATGTCGTTCTCCAGGCCACCGGCCCCGGCGCCGAGGGCTTCAAGGGCTATATG GAGGAAAGCGACGTCTATCGCGTGCTGGCCGAAACCCTGGCGCTCGCTCCGGCGAAAAAGTAA
Upstream 100 bases:
>100_bases GGGGTATTGGTTTTACTCCCAGCGCCAAGGGAACCGGAATGATCTGTACGAATTTTTCCGCGATCCCGTCAGAGCCCCTT TTGCTCCCGAGGAGATCTCC
Downstream 100 bases:
>100_bases GGCGCGCCGCGTTTCGATCTTCGGGCGTCCGGCGGCCTTCGCCGCCGGGCGTCGCCCTCCTGGCCGAAAGGGGTTCGTTT CATGACCACAGGGCCGCTGT
Product: alkaline phosphatase
Products: NA
Alternate protein names: High molecular weight phosphatase; H-AP [H]
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MRTLCATLMLTTCLGTAAQAATVYPLDRATILAGSPFDLKVEFDGAVKAADVTVTINGQPAAKVLGKDVQFVEKEAGTEA SAVLIRAATLAKPGSYTLTASAGADTKSVTWDVYGTPATAKAKNVIFFLGDGLSVAHRTGARLMSKGMTEGKANGRLNMD DLDHMAFIGTSATNAVATDSANTMSAYMTGHKTAVNALGVYADRTEDSLDDPRVETIAEALRRTTTKSIGVVAMSELEDA TPAAVFAHTRKRADKAKITEMIFDLKPDVLLGGGSAFFLPKSVPGSKRKDDKDYVAAFKDAGYTVATSASELEAAKGTNS GKILGLFHTGNMDTYLDRVQLKKGTVGKFPDQPGLVEMTTVALGQLAKNPDGFFLMVEGSSIDKMAHPMDWERSMVETIE FDQAIGVAREFVKTHPDTLIVVTGDHTHGVSIIGTIDDNKPGAEMRDKVGTYADAGFPNYTDENKDGYPDRVDVSRRLAI FSSNFPDYYETFQPKLDGPFVPAIQNEKKEYVANEAYKSVPGAVLRIGNLPRSEDTAVHAVDDVVLQATGPGAEGFKGYM EESDVYRVLAETLALAPAKK
Sequences:
>Translated_580_residues MRTLCATLMLTTCLGTAAQAATVYPLDRATILAGSPFDLKVEFDGAVKAADVTVTINGQPAAKVLGKDVQFVEKEAGTEA SAVLIRAATLAKPGSYTLTASAGADTKSVTWDVYGTPATAKAKNVIFFLGDGLSVAHRTGARLMSKGMTEGKANGRLNMD DLDHMAFIGTSATNAVATDSANTMSAYMTGHKTAVNALGVYADRTEDSLDDPRVETIAEALRRTTTKSIGVVAMSELEDA TPAAVFAHTRKRADKAKITEMIFDLKPDVLLGGGSAFFLPKSVPGSKRKDDKDYVAAFKDAGYTVATSASELEAAKGTNS GKILGLFHTGNMDTYLDRVQLKKGTVGKFPDQPGLVEMTTVALGQLAKNPDGFFLMVEGSSIDKMAHPMDWERSMVETIE FDQAIGVAREFVKTHPDTLIVVTGDHTHGVSIIGTIDDNKPGAEMRDKVGTYADAGFPNYTDENKDGYPDRVDVSRRLAI FSSNFPDYYETFQPKLDGPFVPAIQNEKKEYVANEAYKSVPGAVLRIGNLPRSEDTAVHAVDDVVLQATGPGAEGFKGYM EESDVYRVLAETLALAPAKK >Mature_580_residues MRTLCATLMLTTCLGTAAQAATVYPLDRATILAGSPFDLKVEFDGAVKAADVTVTINGQPAAKVLGKDVQFVEKEAGTEA SAVLIRAATLAKPGSYTLTASAGADTKSVTWDVYGTPATAKAKNVIFFLGDGLSVAHRTGARLMSKGMTEGKANGRLNMD DLDHMAFIGTSATNAVATDSANTMSAYMTGHKTAVNALGVYADRTEDSLDDPRVETIAEALRRTTTKSIGVVAMSELEDA TPAAVFAHTRKRADKAKITEMIFDLKPDVLLGGGSAFFLPKSVPGSKRKDDKDYVAAFKDAGYTVATSASELEAAKGTNS GKILGLFHTGNMDTYLDRVQLKKGTVGKFPDQPGLVEMTTVALGQLAKNPDGFFLMVEGSSIDKMAHPMDWERSMVETIE FDQAIGVAREFVKTHPDTLIVVTGDHTHGVSIIGTIDDNKPGAEMRDKVGTYADAGFPNYTDENKDGYPDRVDVSRRLAI FSSNFPDYYETFQPKLDGPFVPAIQNEKKEYVANEAYKSVPGAVLRIGNLPRSEDTAVHAVDDVVLQATGPGAEGFKGYM EESDVYRVLAETLALAPAKK
Specific function: Has only a phosphomonoesterase activity [H]
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Secreted. Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=504, Percent_Identity=28.7698412698413, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI94721246, Length=510, Percent_Identity=28.0392156862745, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI116734717, Length=346, Percent_Identity=30.635838150289, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI157266292, Length=350, Percent_Identity=30.5714285714286, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI294660770, Length=338, Percent_Identity=29.585798816568, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI294660772, Length=294, Percent_Identity=29.2517006802721, Blast_Score=109, Evalue=8e-24, Organism=Escherichia coli, GI48994877, Length=359, Percent_Identity=32.8690807799443, Blast_Score=135, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6320689, Length=340, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=6e-22, Organism=Drosophila melanogaster, GI21358067, Length=496, Percent_Identity=29.6370967741936, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI19921912, Length=496, Percent_Identity=29.4354838709677, Blast_Score=145, Evalue=8e-35, Organism=Drosophila melanogaster, GI24657835, Length=508, Percent_Identity=27.755905511811, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI24657842, Length=510, Percent_Identity=27.4509803921569, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI21355151, Length=487, Percent_Identity=27.7207392197125, Blast_Score=127, Evalue=3e-29, Organism=Drosophila melanogaster, GI18859923, Length=463, Percent_Identity=27.4298056155508, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI21355981, Length=489, Percent_Identity=27.8118609406953, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24657827, Length=492, Percent_Identity=27.4390243902439, Blast_Score=122, Evalue=6e-28, Organism=Drosophila melanogaster, GI21355149, Length=401, Percent_Identity=28.6783042394015, Blast_Score=121, Evalue=2e-27, Organism=Drosophila melanogaster, GI85725200, Length=354, Percent_Identity=29.3785310734463, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI85815833, Length=354, Percent_Identity=29.3785310734463, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24585213, Length=358, Percent_Identity=25.9776536312849, Blast_Score=95, Evalue=2e-19,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 61951; Mature: 61951
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLCATLMLTTCLGTAAQAATVYPLDRATILAGSPFDLKVEFDGAVKAADVTVTINGQP CHHHHHHHHHHHHHCCHHCCEEEEECCCEEEEECCCEEEEEEECCCEEEEEEEEEECCCC AAKVLGKDVQFVEKEAGTEASAVLIRAATLAKPGSYTLTASAGADTKSVTWDVYGTPATA HHHHHCCHHHHHHHHCCCCHHHEEEEHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCC KAKNVIFFLGDGLSVAHRTGARLMSKGMTEGKANGRLNMDDLDHMAFIGTSATNAVATDS CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCC ANTMSAYMTGHKTAVNALGVYADRTEDSLDDPRVETIAEALRRTTTKSIGVVAMSELEDA CCCEEEHHCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHCHHCCEEEEHHCCCC TPAAVFAHTRKRADKAKITEMIFDLKPDVLLGGGSAFFLPKSVPGSKRKDDKDYVAAFKD CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCCHHHHHHHHC AGYTVATSASELEAAKGTNSGKILGLFHTGNMDTYLDRVQLKKGTVGKFPDQPGLVEMTT CCEEEECCHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHH VALGQLAKNPDGFFLMVEGSSIDKMAHPMDWERSMVETIEFDQAIGVAREFVKTHPDTLI HHHHHHHCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VVTGDHTHGVSIIGTIDDNKPGAEMRDKVGTYADAGFPNYTDENKDGYPDRVDVSRRLAI EEECCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEE FSSNFPDYYETFQPKLDGPFVPAIQNEKKEYVANEAYKSVPGAVLRIGNLPRSEDTAVHA EECCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEE VDDVVLQATGPGAEGFKGYMEESDVYRVLAETLALAPAKK EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRTLCATLMLTTCLGTAAQAATVYPLDRATILAGSPFDLKVEFDGAVKAADVTVTINGQP CHHHHHHHHHHHHHCCHHCCEEEEECCCEEEEECCCEEEEEEECCCEEEEEEEEEECCCC AAKVLGKDVQFVEKEAGTEASAVLIRAATLAKPGSYTLTASAGADTKSVTWDVYGTPATA HHHHHCCHHHHHHHHCCCCHHHEEEEHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCC KAKNVIFFLGDGLSVAHRTGARLMSKGMTEGKANGRLNMDDLDHMAFIGTSATNAVATDS CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCC ANTMSAYMTGHKTAVNALGVYADRTEDSLDDPRVETIAEALRRTTTKSIGVVAMSELEDA CCCEEEHHCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHCHHCCEEEEHHCCCC TPAAVFAHTRKRADKAKITEMIFDLKPDVLLGGGSAFFLPKSVPGSKRKDDKDYVAAFKD CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCCHHHHHHHHC AGYTVATSASELEAAKGTNSGKILGLFHTGNMDTYLDRVQLKKGTVGKFPDQPGLVEMTT CCEEEECCHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHH VALGQLAKNPDGFFLMVEGSSIDKMAHPMDWERSMVETIEFDQAIGVAREFVKTHPDTLI HHHHHHHCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VVTGDHTHGVSIIGTIDDNKPGAEMRDKVGTYADAGFPNYTDENKDGYPDRVDVSRRLAI EEECCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEE FSSNFPDYYETFQPKLDGPFVPAIQNEKKEYVANEAYKSVPGAVLRIGNLPRSEDTAVHA EECCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEE VDDVVLQATGPGAEGFKGYMEESDVYRVLAETLALAPAKK EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043; 8454193 [H]