| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yhaO [H]
Identifier: 83592607
GI number: 83592607
Start: 1494186
End: 1495421
Strand: Reverse
Name: yhaO [H]
Synonym: Rru_A1271
Alternate gene names: 83592607
Gene position: 1495421-1494186 (Counterclockwise)
Preceding gene: 83592609
Following gene: 83592606
Centisome position: 34.36
GC content: 69.5
Gene sequence:
>1236_bases ATGCGCATTCTTCACGCCGCCGATATCCACCTCGACAGCCCGCTTTCCGGACTGATCGCCCGAGCCGGCGGCCAGGTGGG CGATTTGACGACGGCGACGCGCCGCGCCTTCACCGCGATGATCGATTACGCCCTTGAGGCCGGGGTCGACCTCGTGCTGA TCGCCGGCGATCTTTACGATGGCGACTGGCGGGATTTTTCGACGGGGCTGTTTTTCCTCTCGCAGATGGCCCGCCTTGAA CGCCAGGGGATCCGCGTCGCCGTGGTCCAGGGCAATCACGACGCCGAAAACCGCATGACCCGCTCGCTGCGCTGGCCGCC CACGGTCAAGGTCTTTCGCTCTGATCGGGCCGAGACCTGGATCCCCGAGGGGCTGGAAGTGGCGATCCATGGCCGCAGCT TCCCGCGCCGCGACGTGACCGAGGATCTGTCGGCCGGCTACCCGCCGCCGGTGGCCGGGCTGTTCAACATCGGCCTGCTC CACACCGCCGCCGACGGCCGCCTTGGCCATACCCCCTACGCGCCCTGCGACGTGCCGACCCTGGTTGGCAAGGGCTATGA TTATTGGGCCCTCGGTCACGTTCATGGCCGGGCCATCCTGCACGAACGGCCCTGGGTGGTGTTTCCGGGCAATCTCCAGG CCCGCCACGTCAACGAACCCGGGGCCAAGGGAGCGACGCTGCTCACCATCGACGGCGGCGAGGTCACCGCCCTTGAGGCC CTGGCCTTTGATGTCTTGCGCTGGGTCCGCCTGGAGGTCGATCTGGGCGGTTGCGCCTCGCCCCAGCAGGCCTATGGGCG GATCGAGACCGCCCTGGCCGAGGCGCTGACCCAGGCCGAGGGCCGGGCTTTGGCCGTCCGCCTGACGCTCAGCGGCGCCA CCGCCGTTCACGACCTTTTGGCCGGCGACCCGGAACGCACCACCGCCGAATGTCTGGCCCTGACCGAACGGGCCGGCGGC GAGGTCTGGCTTGAAAAAGTGGCCGTGGCAACCACCCCGCCGCGCCAGGACGGCGCCCCGGCGGCGGACGAGCTTTTCGC GGTGATCGCCCGCATCCTTGAGACGCCCGAGGAACGCGCTGTCTTGCGCGCCGATCTTGAACAGGCCCTGACCCGGGTTC CGCCGACGATCCGCCAAGCCGCCGGCCTCACCCCCCTTGACGAGCAAGCCCTGGCCGGGCTGCTGGCGGCGGCCGAGGCG ACCTTGCGTCGGCGCCTGCTCGACAGTCCCGAGTAA
Upstream 100 bases:
>100_bases CCGAAGGGCTTGAAGCCGCCCCCCGCCCGTGCGACCGTCGAGTCCCCCTATCCCGGGAGGGGCCGCCTATCGCCGACAAC CGCCGTTTTTCGGATCTTCC
Downstream 100 bases:
>100_bases GGAAACCGACCATGCGCATCGATCGGCTGGTCCTGGAACGCTACGGCCATTTCGCAGACCACAGCTTCGACTTTTCCGGC GATGGCCCCCGGCTGGAGAT
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MRILHAADIHLDSPLSGLIARAGGQVGDLTTATRRAFTAMIDYALEAGVDLVLIAGDLYDGDWRDFSTGLFFLSQMARLE RQGIRVAVVQGNHDAENRMTRSLRWPPTVKVFRSDRAETWIPEGLEVAIHGRSFPRRDVTEDLSAGYPPPVAGLFNIGLL HTAADGRLGHTPYAPCDVPTLVGKGYDYWALGHVHGRAILHERPWVVFPGNLQARHVNEPGAKGATLLTIDGGEVTALEA LAFDVLRWVRLEVDLGGCASPQQAYGRIETALAEALTQAEGRALAVRLTLSGATAVHDLLAGDPERTTAECLALTERAGG EVWLEKVAVATTPPRQDGAPAADELFAVIARILETPEERAVLRADLEQALTRVPPTIRQAAGLTPLDEQALAGLLAAAEA TLRRRLLDSPE
Sequences:
>Translated_411_residues MRILHAADIHLDSPLSGLIARAGGQVGDLTTATRRAFTAMIDYALEAGVDLVLIAGDLYDGDWRDFSTGLFFLSQMARLE RQGIRVAVVQGNHDAENRMTRSLRWPPTVKVFRSDRAETWIPEGLEVAIHGRSFPRRDVTEDLSAGYPPPVAGLFNIGLL HTAADGRLGHTPYAPCDVPTLVGKGYDYWALGHVHGRAILHERPWVVFPGNLQARHVNEPGAKGATLLTIDGGEVTALEA LAFDVLRWVRLEVDLGGCASPQQAYGRIETALAEALTQAEGRALAVRLTLSGATAVHDLLAGDPERTTAECLALTERAGG EVWLEKVAVATTPPRQDGAPAADELFAVIARILETPEERAVLRADLEQALTRVPPTIRQAAGLTPLDEQALAGLLAAAEA TLRRRLLDSPE >Mature_411_residues MRILHAADIHLDSPLSGLIARAGGQVGDLTTATRRAFTAMIDYALEAGVDLVLIAGDLYDGDWRDFSTGLFFLSQMARLE RQGIRVAVVQGNHDAENRMTRSLRWPPTVKVFRSDRAETWIPEGLEVAIHGRSFPRRDVTEDLSAGYPPPVAGLFNIGLL HTAADGRLGHTPYAPCDVPTLVGKGYDYWALGHVHGRAILHERPWVVFPGNLQARHVNEPGAKGATLLTIDGGEVTALEA LAFDVLRWVRLEVDLGGCASPQQAYGRIETALAEALTQAEGRALAVRLTLSGATAVHDLLAGDPERTTAECLALTERAGG EVWLEKVAVATTPPRQDGAPAADELFAVIARILETPEERAVLRADLEQALTRVPPTIRQAAGLTPLDEQALAGLLAAAEA TLRRRLLDSPE
Specific function: Unknown
COG id: COG0420
COG function: function code L; DNA repair exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR014576 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 44296; Mature: 44296
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILHAADIHLDSPLSGLIARAGGQVGDLTTATRRAFTAMIDYALEAGVDLVLIAGDLYD CCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC GDWRDFSTGLFFLSQMARLERQGIRVAVVQGNHDAENRMTRSLRWPPTVKVFRSDRAETW CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCEEEECCCCCCC IPEGLEVAIHGRSFPRRDVTEDLSAGYPPPVAGLFNIGLLHTAADGRLGHTPYAPCDVPT CCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCHH LVGKGYDYWALGHVHGRAILHERPWVVFPGNLQARHVNEPGAKGATLLTIDGGEVTALEA HHCCCCCEEEEECCCCEEEEECCCCEEECCCCCEEECCCCCCCCCEEEEECCCCCHHHHH LAFDVLRWVRLEVDLGGCASPQQAYGRIETALAEALTQAEGRALAVRLTLSGATAVHDLL HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHH AGDPERTTAECLALTERAGGEVWLEKVAVATTPPRQDGAPAADELFAVIARILETPEERA CCCCCCHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHH VLRADLEQALTRVPPTIRQAAGLTPLDEQALAGLLAAAEATLRRRLLDSPE HHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRILHAADIHLDSPLSGLIARAGGQVGDLTTATRRAFTAMIDYALEAGVDLVLIAGDLYD CCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC GDWRDFSTGLFFLSQMARLERQGIRVAVVQGNHDAENRMTRSLRWPPTVKVFRSDRAETW CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCEEEECCCCCCC IPEGLEVAIHGRSFPRRDVTEDLSAGYPPPVAGLFNIGLLHTAADGRLGHTPYAPCDVPT CCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCHH LVGKGYDYWALGHVHGRAILHERPWVVFPGNLQARHVNEPGAKGATLLTIDGGEVTALEA HHCCCCCEEEEECCCCEEEEECCCCEEECCCCCEEECCCCCCCCCEEEEECCCCCHHHHH LAFDVLRWVRLEVDLGGCASPQQAYGRIETALAEALTQAEGRALAVRLTLSGATAVHDLL HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHH AGDPERTTAECLALTERAGGEVWLEKVAVATTPPRQDGAPAADELFAVIARILETPEERA CCCCCCHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHH VLRADLEQALTRVPPTIRQAAGLTPLDEQALAGLLAAAEATLRRRLLDSPE HHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]