| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592609
Identifier: 83592609
GI number: 83592609
Start: 1497662
End: 1498438
Strand: Reverse
Name: 83592609
Synonym: Rru_A1273
Alternate gene names: NA
Gene position: 1498438-1497662 (Counterclockwise)
Preceding gene: 83592610
Following gene: 83592607
Centisome position: 34.42
GC content: 67.95
Gene sequence:
>777_bases ATGCGTCTGACCCTTGAGAATCGTCTGGTTTTCATCGAAACCGGAACCGACGGCGTCGATTTATCGCGACCGGTCGTGGT TCTGATCCATGGCGCGGGCATGACCCATAGCGCCTGGGATAAACAATCGGCCGCCCTGGCGGCCGACGGCTGGGCGGTCA TCGCCCCCGATCTGCCCGGCCATGGGCAATCCGAAGGTCCGCCGCTGACCAGCGTTTCCGACCTTTCCGACTGGCTGCTT GGCGTTTTCGATGCCCTGGGCCTTTATCGGGCGGTGGTCAGCGGGCATTCGCTGGGCGGGCTGATCGCCCTGGAATTCGC CCGCCATCATTGCGTGCGCAGCGCTGGACTGGCCTTGATCGGCACCGCCGCCGCCCTGCCCGTTCACCTGGATCTCCTCA AGGCCGCCGATCACGATCTGCCGCGCGCGGCGACGATGATCAGCCGCTGGGGATACACCGCGCAGGCCGACCCCACCCTG GTCGAAGCCCGCAAAAGCCAATGGGCGACGACGGCGCCGGGCCTGCTCCATACCGACCTCATGGTCTGCGACGGCTATGG CGAGGGGGCGGCGGCGGCGGCGCGCATTCCCTGCCCGGCCCTGGTCGTTCACGGCGAGCAAGACCGCATGGTCTCGCTGC GCGGCGCCCTGATGCTTGTCGAGATCCTGCCCCACGGCCACGCCCTGCTGGTCACCAACGCCGGCCACATGGTGATGGAC GAACGGCCCGACGCCGTGCTTGAAGCCCTCCACCGCCTGCGCCCCTTCGCCGCCTGA
Upstream 100 bases:
>100_bases TGTCAGCCAAGCCCTGGCTCCCTTGTAAGGCCTGGGGGGAGGCGCGAGAGAGGCTTGGAAGGACGGTCAACCTTGACCGG CGTTCCGAAAAGAGGGCCCC
Downstream 100 bases:
>100_bases AAGCCGCTCCAGCCCGCCCTTCCTCCTTCAGGATCTGGCCACCGATTGGGTTTGCCCAAAGCAGGCCACGCGATCCCGGC CGCCATGCTTGGCGGCGTAC
Product: alpha/beta hydrolase fold
Products: alcohol; carboxylate
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Hydrolase; Carboxylesterase; Hydrolase Protein; 3-Oxoadipate Enol-Lactone Hydrolase; 3-Oxoadipate Enol-Lactonase; Hydolase; Hydrolase Alpha/Beta Fold Family; Glutamate Decarboxylase-Like PLP-Dependent Protein; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MRLTLENRLVFIETGTDGVDLSRPVVVLIHGAGMTHSAWDKQSAALAADGWAVIAPDLPGHGQSEGPPLTSVSDLSDWLL GVFDALGLYRAVVSGHSLGGLIALEFARHHCVRSAGLALIGTAAALPVHLDLLKAADHDLPRAATMISRWGYTAQADPTL VEARKSQWATTAPGLLHTDLMVCDGYGEGAAAAARIPCPALVVHGEQDRMVSLRGALMLVEILPHGHALLVTNAGHMVMD ERPDAVLEALHRLRPFAA
Sequences:
>Translated_258_residues MRLTLENRLVFIETGTDGVDLSRPVVVLIHGAGMTHSAWDKQSAALAADGWAVIAPDLPGHGQSEGPPLTSVSDLSDWLL GVFDALGLYRAVVSGHSLGGLIALEFARHHCVRSAGLALIGTAAALPVHLDLLKAADHDLPRAATMISRWGYTAQADPTL VEARKSQWATTAPGLLHTDLMVCDGYGEGAAAAARIPCPALVVHGEQDRMVSLRGALMLVEILPHGHALLVTNAGHMVMD ERPDAVLEALHRLRPFAA >Mature_258_residues MRLTLENRLVFIETGTDGVDLSRPVVVLIHGAGMTHSAWDKQSAALAADGWAVIAPDLPGHGQSEGPPLTSVSDLSDWLL GVFDALGLYRAVVSGHSLGGLIALEFARHHCVRSAGLALIGTAAALPVHLDLLKAADHDLPRAATMISRWGYTAQADPTL VEARKSQWATTAPGLLHTDLMVCDGYGEGAAAAARIPCPALVVHGEQDRMVSLRGALMLVEILPHGHALLVTNAGHMVMD ERPDAVLEALHRLRPFAA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.1
Molecular weight: Translated: 27272; Mature: 27272
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTLENRLVFIETGTDGVDLSRPVVVLIHGAGMTHSAWDKQSAALAADGWAVIAPDLPG CEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCEEEECCCCC HGQSEGPPLTSVSDLSDWLLGVFDALGLYRAVVSGHSLGGLIALEFARHHCVRSAGLALI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEE GTAAALPVHLDLLKAADHDLPRAATMISRWGYTAQADPTLVEARKSQWATTAPGLLHTDL EHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEE MVCDGYGEGAAAAARIPCPALVVHGEQDRMVSLRGALMLVEILPHGHALLVTNAGHMVMD EEECCCCCCCCCEECCCCCEEEEECCCCCEEHHHHHEEEEEECCCCCEEEEECCCCEEEC ERPDAVLEALHRLRPFAA CCCHHHHHHHHHHCCCCC >Mature Secondary Structure MRLTLENRLVFIETGTDGVDLSRPVVVLIHGAGMTHSAWDKQSAALAADGWAVIAPDLPG CEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCEEEECCCCC HGQSEGPPLTSVSDLSDWLLGVFDALGLYRAVVSGHSLGGLIALEFARHHCVRSAGLALI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEE GTAAALPVHLDLLKAADHDLPRAATMISRWGYTAQADPTLVEARKSQWATTAPGLLHTDL EHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEE MVCDGYGEGAAAAARIPCPALVVHGEQDRMVSLRGALMLVEILPHGHALLVTNAGHMVMD EEECCCCCCCCCEECCCCCEEEEECCCCCEEHHHHHEEEEEECCCCCEEEEECCCCEEEC ERPDAVLEALHRLRPFAA CCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: carboxylic ester; H2O
Specific reaction: A carboxylic ester + H2O = an alcohol + a carboxylate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA