| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592582
Identifier: 83592582
GI number: 83592582
Start: 1467698
End: 1468861
Strand: Reverse
Name: 83592582
Synonym: Rru_A1246
Alternate gene names: NA
Gene position: 1468861-1467698 (Counterclockwise)
Preceding gene: 83592583
Following gene: 83592581
Centisome position: 33.75
GC content: 61.68
Gene sequence:
>1164_bases ATGCACGTCTTCAACTATGGTCGTTCTTATTTGGAACGCGGCGACGCCCGTCCGATTTATCTGCCGGAATTGCCCCTGGT CCGCGGCGCCCTGCTGCCGCAAGCGCCTCTCGACATGGCGGGAGCCTTGCGCGACGCCGCCCCTGACGCCTGGGGGCGGC GGGTGATTATCAACCGGCTAATGGGTCTGAAGGGCGTGGGCGCCCACGCCGTCGAGTTCGACGAACTGACTTATTTGCTC CATTCGGGCTCGGACCGCATCGGCGCGCTGGACTTCCAGACATCACCGGACCGCTATCGGCCGCGGGAGGCCGAGAATGC GACGCTGGAGGAATTACTTGAAGCGGCCGAGCGCGTTGACCGGGGAGAGCCCATTCCTCCGGCCCTGGACAAGGCGTTGT TTCATGGCAGTTCAATCGGCGGAGCGCGTCCGAAGGCCTTGATCGAGGATGGCCAAGAGAAGTTCATCGCCAAATTCTCA GCGACCAACGATACCTACGCTATCGTCAAGGCCGAGTATGTGGCGATGCGGCTGGCGAAAGAGGCCGCCGGCCTCACTGT CGCGGCAGTCCGGCTGGTCAAGGCCAATGGCAAGGACGTTTTGCTGGTCAAACGCTTCGACCGCGAGCGAACTGGCGCGG GATGGACGCGGCGCGCCATGGTCTCGGCACTGACCCTTTTGGGCCTTTCTGAAATGCAGGCGCGGTATGCGAGCTATCAC GATCTTACCGACATCATTCGCGCCCGCTTCACCGAGCCAAGGGACAGCTTGCGCGAGCTTTACGGGCGGATGGTTTTCAA CGTGCTTTCGGGCAATACGGATGATCACGCCCGCAACCATGCCGCCTTTTGGAATGGCGAATCCCTGGCACTGACGCCCG CCTATGACCTCTGCCCCCAGCAACGAACAGGACGGGAAGCCAATCAAGCCATGCTGATCGGACAGGAGGATCGCCGCAGC CGTCTGGAAACCTGCCGGCTCGCGGCCTCAGCCTTTCTGCTGAACGACGTAGAGGCCCGTGCCCTTATCCATGCGCAGAT CGACGCTATCGGCGCGGCCTGGGACGGTATTTGCGATGAAGCGGACCTTAGCAAGATCGACCGCGCCTTCCTGTGGCGAC GGCAGTTTTTGAATGACTACGCATTTGAGGGGTTTGGAAGGTAG
Upstream 100 bases:
>100_bases TTTCGATGGGGAAGCGGCCCCACGGGAAGCCTATGTTTGGCTCTGGTTACCAGGACATCACGAACCGGTTGTCGCCGGTC GGCTTGTCCGTGACGGCGAC
Downstream 100 bases:
>100_bases CTCCCGGCTTTTACACAGCTATAGAGAGTGAGAAAGGATGGAAAGCAGATCCCCGGCGCTCGGGCAATCGCGCAAAGACC GATGCGAGGCGGACACAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; Amidophosphoribosyl Transferase; HipA-Like Protein; HipA Protein; Hipa Domain Protein; HipA-Like C-Terminal Domain-Containing; HipA-Like; Hipa Protein; Protein Related Capsule Biosynthesis -Like; Protein Containing HipA-Like C-Terminal Domain; HipA-Like N-Terminal Domain Family; HipA Family Protein; Conserved Protein; Orf_Bo
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MHVFNYGRSYLERGDARPIYLPELPLVRGALLPQAPLDMAGALRDAAPDAWGRRVIINRLMGLKGVGAHAVEFDELTYLL HSGSDRIGALDFQTSPDRYRPREAENATLEELLEAAERVDRGEPIPPALDKALFHGSSIGGARPKALIEDGQEKFIAKFS ATNDTYAIVKAEYVAMRLAKEAAGLTVAAVRLVKANGKDVLLVKRFDRERTGAGWTRRAMVSALTLLGLSEMQARYASYH DLTDIIRARFTEPRDSLRELYGRMVFNVLSGNTDDHARNHAAFWNGESLALTPAYDLCPQQRTGREANQAMLIGQEDRRS RLETCRLAASAFLLNDVEARALIHAQIDAIGAAWDGICDEADLSKIDRAFLWRRQFLNDYAFEGFGR
Sequences:
>Translated_387_residues MHVFNYGRSYLERGDARPIYLPELPLVRGALLPQAPLDMAGALRDAAPDAWGRRVIINRLMGLKGVGAHAVEFDELTYLL HSGSDRIGALDFQTSPDRYRPREAENATLEELLEAAERVDRGEPIPPALDKALFHGSSIGGARPKALIEDGQEKFIAKFS ATNDTYAIVKAEYVAMRLAKEAAGLTVAAVRLVKANGKDVLLVKRFDRERTGAGWTRRAMVSALTLLGLSEMQARYASYH DLTDIIRARFTEPRDSLRELYGRMVFNVLSGNTDDHARNHAAFWNGESLALTPAYDLCPQQRTGREANQAMLIGQEDRRS RLETCRLAASAFLLNDVEARALIHAQIDAIGAAWDGICDEADLSKIDRAFLWRRQFLNDYAFEGFGR >Mature_387_residues MHVFNYGRSYLERGDARPIYLPELPLVRGALLPQAPLDMAGALRDAAPDAWGRRVIINRLMGLKGVGAHAVEFDELTYLL HSGSDRIGALDFQTSPDRYRPREAENATLEELLEAAERVDRGEPIPPALDKALFHGSSIGGARPKALIEDGQEKFIAKFS ATNDTYAIVKAEYVAMRLAKEAAGLTVAAVRLVKANGKDVLLVKRFDRERTGAGWTRRAMVSALTLLGLSEMQARYASYH DLTDIIRARFTEPRDSLRELYGRMVFNVLSGNTDDHARNHAAFWNGESLALTPAYDLCPQQRTGREANQAMLIGQEDRRS RLETCRLAASAFLLNDVEARALIHAQIDAIGAAWDGICDEADLSKIDRAFLWRRQFLNDYAFEGFGR
Specific function: Unknown
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43090; Mature: 43090
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVFNYGRSYLERGDARPIYLPELPLVRGALLPQAPLDMAGALRDAAPDAWGRRVIINRL CCCCHHHHHHHHCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH MGLKGVGAHAVEFDELTYLLHSGSDRIGALDFQTSPDRYRPREAENATLEELLEAAERVD HCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHC RGEPIPPALDKALFHGSSIGGARPKALIEDGQEKFIAKFSATNDTYAIVKAEYVAMRLAK CCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHH EAAGLTVAAVRLVKANGKDVLLVKRFDRERTGAGWTRRAMVSALTLLGLSEMQARYASYH HHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLTDIIRARFTEPRDSLRELYGRMVFNVLSGNTDDHARNHAAFWNGESLALTPAYDLCPQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEECCCEEEECCHHHCCCC QRTGREANQAMLIGQEDRRSRLETCRLAASAFLLNDVEARALIHAQIDAIGAAWDGICDE HHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ADLSKIDRAFLWRRQFLNDYAFEGFGR HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHVFNYGRSYLERGDARPIYLPELPLVRGALLPQAPLDMAGALRDAAPDAWGRRVIINRL CCCCHHHHHHHHCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH MGLKGVGAHAVEFDELTYLLHSGSDRIGALDFQTSPDRYRPREAENATLEELLEAAERVD HCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHC RGEPIPPALDKALFHGSSIGGARPKALIEDGQEKFIAKFSATNDTYAIVKAEYVAMRLAK CCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHH EAAGLTVAAVRLVKANGKDVLLVKRFDRERTGAGWTRRAMVSALTLLGLSEMQARYASYH HHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLTDIIRARFTEPRDSLRELYGRMVFNVLSGNTDDHARNHAAFWNGESLALTPAYDLCPQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEECCCEEEECCHHHCCCC QRTGREANQAMLIGQEDRRSRLETCRLAASAFLLNDVEARALIHAQIDAIGAAWDGICDE HHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ADLSKIDRAFLWRRQFLNDYAFEGFGR HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA