| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592581
Identifier: 83592581
GI number: 83592581
Start: 1466875
End: 1467525
Strand: Reverse
Name: 83592581
Synonym: Rru_A1245
Alternate gene names: NA
Gene position: 1467525-1466875 (Counterclockwise)
Preceding gene: 83592582
Following gene: 83592580
Centisome position: 33.71
GC content: 66.36
Gene sequence:
>651_bases ATGACGCCCGCCTTCCGCCTTCCGGGCCTTGCCGAGCTCGACGCCGAATCCGCGCGGGTTTTCGCGGGGGCGGCGCGGAG CGTTCAGGTTCCGGCCGGCACCATCTTGTTTCGCACCGGCGCGCGCTGCGAAAGCTATGTGCTGGTGGTTAGCGGGGCGA TCCGCGTCCATCGCACCTCGCCGGGCGGGCGGGAAATCGTGCTCTATCGGGTTGAAGGCGGGCAGAGCTGTGTTCTAACC ACCAACTGCCTGATCGCCGCCCGCGATTACGACGCCGAGGGCGTCGCCGAAACCGATGTCGAGATGATCGCCCTACCGGC GCCAACTTTCCGCCGCTTGCTGGCCGCTTCGGAAGCCTTTCGCGATTTCGTCTTTGCGGCCTATGCCAGCCGGCTGTCGG ATCTGCTGCTGTTGATCGAAGAGGTGGCCTTTGGCCGTATCGATGTTCGGCTGGCCGGCTGGCTGGCCGCCCGCGGCGAT CAGCCGATCGCCATCACCCATCAAGACCTCGCGGTGGAATTGGGAACGGCGCGGGAGGTCATCAGCCGCCAGTTGAAGGA TTTCGAGCGCCGCGGCTGGGTCGACCTGGGGCGCGGCATAATCGCTCCGCGCGATCCACAGGCTTTGCGCCACTTGGCCG AGGGTGTGTGA
Upstream 100 bases:
>100_bases CAAAGACCGATGCGAGGCGGACACAGCCAATGGCTTGCGCTTGTTCCTCGGAGGGGCATGATGGGCGAACGCCCCCTTCC GTCTTGATCACGAGGCCGCC
Downstream 100 bases:
>100_bases CAAGGTCACTGAGCCCCTTGTCTGGTCATGGTCCTATCGGTCTGGCGATCCCCGCCCCCTTAGGAGATATCCCATCATGA CCAGCAATGTCGGCACCATC
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; CRP Family Transcriptional Regulator; Transcriptional Regulator Crp Family Protein; Transcription Regulator Nnr-Type; Regulatory Protein; Transcriptional Regulator Nnr-Like; CAMP-Bindin Transcriptional Regulator; Transcriptional Regulator Crp Family; Transcriptional Regulator Crp-Fnr Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTPAFRLPGLAELDAESARVFAGAARSVQVPAGTILFRTGARCESYVLVVSGAIRVHRTSPGGREIVLYRVEGGQSCVLT TNCLIAARDYDAEGVAETDVEMIALPAPTFRRLLAASEAFRDFVFAAYASRLSDLLLLIEEVAFGRIDVRLAGWLAARGD QPIAITHQDLAVELGTAREVISRQLKDFERRGWVDLGRGIIAPRDPQALRHLAEGV
Sequences:
>Translated_216_residues MTPAFRLPGLAELDAESARVFAGAARSVQVPAGTILFRTGARCESYVLVVSGAIRVHRTSPGGREIVLYRVEGGQSCVLT TNCLIAARDYDAEGVAETDVEMIALPAPTFRRLLAASEAFRDFVFAAYASRLSDLLLLIEEVAFGRIDVRLAGWLAARGD QPIAITHQDLAVELGTAREVISRQLKDFERRGWVDLGRGIIAPRDPQALRHLAEGV >Mature_215_residues TPAFRLPGLAELDAESARVFAGAARSVQVPAGTILFRTGARCESYVLVVSGAIRVHRTSPGGREIVLYRVEGGQSCVLTT NCLIAARDYDAEGVAETDVEMIALPAPTFRRLLAASEAFRDFVFAAYASRLSDLLLLIEEVAFGRIDVRLAGWLAARGDQ PIAITHQDLAVELGTAREVISRQLKDFERRGWVDLGRGIIAPRDPQALRHLAEGV
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23443; Mature: 23312
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAFRLPGLAELDAESARVFAGAARSVQVPAGTILFRTGARCESYVLVVSGAIRVHRTS CCCCCCCCCCCCCCCCHHHEEECCCCEEECCCCEEEEECCCCCCEEEEEEECEEEEEECC PGGREIVLYRVEGGQSCVLTTNCLIAARDYDAEGVAETDVEMIALPAPTFRRLLAASEAF CCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH RDFVFAAYASRLSDLLLLIEEVAFGRIDVRLAGWLAARGDQPIAITHQDLAVELGTAREV HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCEEEECCHHEEEHHHHHHH ISRQLKDFERRGWVDLGRGIIAPRDPQALRHLAEGV HHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TPAFRLPGLAELDAESARVFAGAARSVQVPAGTILFRTGARCESYVLVVSGAIRVHRTS CCCCCCCCCCCCCCCHHHEEECCCCEEECCCCEEEEECCCCCCEEEEEEECEEEEEECC PGGREIVLYRVEGGQSCVLTTNCLIAARDYDAEGVAETDVEMIALPAPTFRRLLAASEAF CCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH RDFVFAAYASRLSDLLLLIEEVAFGRIDVRLAGWLAARGDQPIAITHQDLAVELGTAREV HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCEEEECCHHEEEHHHHHHH ISRQLKDFERRGWVDLGRGIIAPRDPQALRHLAEGV HHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA