| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83592567
Identifier: 83592567
GI number: 83592567
Start: 1452664
End: 1454412
Strand: Reverse
Name: 83592567
Synonym: Rru_A1231
Alternate gene names: NA
Gene position: 1454412-1452664 (Counterclockwise)
Preceding gene: 83592568
Following gene: 83592566
Centisome position: 33.41
GC content: 73.41
Gene sequence:
>1749_bases GTGGTGAAAATCCCCTCCCTGCCCAAATCTGGCAAGCCGTCGCGCCCCGGGGCCTCGCGCCCGGGCGCGGCCGCGGACAA GCCCTCCCGATCCCCGGCCGCCCTCTCGAGCGCGGCCGAGGATGATATCGACGTTGGCGATGATCTGGAGTTCGACATCG CCCCCGATCCTTTACCCCCGCCCACGCCGCTTCCCCGGTCCTCGGCCGGCGGCGGCCTGGGCGAGGCATTGCGCGGCCTG TTCCGCCGCACCGATGATCCCGACACCGCCCCCCATTACTACGACCTGCGGGCCGAACCCCGCGAGCGCCGGGGTTGGCT GATGGCCGGCGCCGCGCTGCTTCTGGCCGGCGGATTGGTCGGCGCCTGGATGACGGTGCGCAGCCCCGACGAGCCGCGCA CCCCCGGGCCGGTCAATAGCGGCGCCTCGATCACCTTGCCGCTTCCCGCGGCCGAAGGCCGTCTGGGGTTGTTGACCCCG CCCGGAGAAGCTGGTCAGACCAGCGACCGCTCGGCCCAACGCCGCCCCTGGCTCAGCGAAGCGGCGCCCTCGGCGATGCC CGACGCCGGCCAAGATCCCGCCCAGGACAGGGCCGAACCCCCGCAGCCGGCCGCCCCGGCCGCCATCGCCGCGCCGCCGC CCACGCCAGAGCCTGCCTCGCCGCCGGCCGCCGCCGTGCCGCCGCCGGTCGCGCCCCCACCGACGGTGGCAAGCCCGACG CCCGCCGCCCCGCCGGCCGTGGCTCCGGCCCCGGCTGTGACCGCCGCTCCGCCCCCCGCCCCGGCCGCCGGCGCCTTCCA GCGGCCAAGCGGCGCCCTGCTTCCCAGCGAGGTGGCGGTGGCCCTGCCGCGCGGGTCCTCGCCGCCCTTGGAAGAGGGCT TTCGCCCCGGCCGCACGCCTTCGTACAACGACCTTCCCGCTCCGGGTACCTTCCCGGCGCCCAGCCTGGGCGATGCGCCG TCAAGCGATTTGCTGCGCAGTTCCGAGCATGGCCTGCTGCCGGTGATCGCCGCCGATGGCCGCATGCCCTGGCGCACCTA TGCCCGCCCCTTCACCGGCGACGCCACCCGCCCCAGGGTGGCGATCATCGTCAGCGGTCTTGGCATGCGCGAAGCCGCCA CCCAGGCGGCGATCACCCGGCTGCCGCCGGACGTGACCCTGGCCTTCGATCCCTATGCTCCGGCCCTGCCGGCATGGATG GGCAAGGCCCGCCAGTCCGGTCATGAAACGCTTCTGGAACTGCCCGTCGAACCCACCGGCTATCCGGCGATCGATCCCGG CCCGCTGGCCCTGCTCAGCGGTTTGTCCGAGATCGAGAACCGCAGCCGCCTGGAAACCGTGCTCGGGCGGAGCGGCGGCT ATGTCGGCGTGTTGGCGACCGCCGCCGGCCGCTTCACCGACACCCCGGCCTCGCTGCGCGGCTTGCTCGATGCCTTGAAA AGCCGTGGCCTTTTGTATGTTCACCGGGGATCGCCCACCGCCGTCAATGTCAACGGCGATGCCGCGCCGCCGGTCAATAT CGTGACCGCGCGCATCGATGACACCCCCAACCAACGCGCCATCGACGCCCGCCTCGAGTACCTTGGGCAGGTCGCCCGCG CCCAGGGCTATGCCATCGGCGTCGTCGGCGCCTCCCCGGTCGCCCTCTACCGCCTCAATCGCTGGCTGGGGGGACTGGAG GGCGAGGGTCTGGTGCTGGCGCCAGCTTCGGCGGTGATGGTGACCGGCGAACGGAGAGCCACCCAATGA
Upstream 100 bases:
>100_bases CAGCTCGCCCGCGCCGTGGATCTGATCCGCGGTCTGGCGATCTATCGCTCCAAGTCCATCCAGTAAGACAGGCGAGCTCA CCGGTGCGCGACGGAAACAG
Downstream 100 bases:
>100_bases CCCCACAACCGCCCCTGTCCGCCGCTGGCCTGCCCTATCGCCAGGGGGTGGGGATCATGCTGATCAACGCCCGGGGTCAG GTTTTCGTCGCCCGCCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MVKIPSLPKSGKPSRPGASRPGAAADKPSRSPAALSSAAEDDIDVGDDLEFDIAPDPLPPPTPLPRSSAGGGLGEALRGL FRRTDDPDTAPHYYDLRAEPRERRGWLMAGAALLLAGGLVGAWMTVRSPDEPRTPGPVNSGASITLPLPAAEGRLGLLTP PGEAGQTSDRSAQRRPWLSEAAPSAMPDAGQDPAQDRAEPPQPAAPAAIAAPPPTPEPASPPAAAVPPPVAPPPTVASPT PAAPPAVAPAPAVTAAPPPAPAAGAFQRPSGALLPSEVAVALPRGSSPPLEEGFRPGRTPSYNDLPAPGTFPAPSLGDAP SSDLLRSSEHGLLPVIAADGRMPWRTYARPFTGDATRPRVAIIVSGLGMREAATQAAITRLPPDVTLAFDPYAPALPAWM GKARQSGHETLLELPVEPTGYPAIDPGPLALLSGLSEIENRSRLETVLGRSGGYVGVLATAAGRFTDTPASLRGLLDALK SRGLLYVHRGSPTAVNVNGDAAPPVNIVTARIDDTPNQRAIDARLEYLGQVARAQGYAIGVVGASPVALYRLNRWLGGLE GEGLVLAPASAVMVTGERRATQ
Sequences:
>Translated_582_residues MVKIPSLPKSGKPSRPGASRPGAAADKPSRSPAALSSAAEDDIDVGDDLEFDIAPDPLPPPTPLPRSSAGGGLGEALRGL FRRTDDPDTAPHYYDLRAEPRERRGWLMAGAALLLAGGLVGAWMTVRSPDEPRTPGPVNSGASITLPLPAAEGRLGLLTP PGEAGQTSDRSAQRRPWLSEAAPSAMPDAGQDPAQDRAEPPQPAAPAAIAAPPPTPEPASPPAAAVPPPVAPPPTVASPT PAAPPAVAPAPAVTAAPPPAPAAGAFQRPSGALLPSEVAVALPRGSSPPLEEGFRPGRTPSYNDLPAPGTFPAPSLGDAP SSDLLRSSEHGLLPVIAADGRMPWRTYARPFTGDATRPRVAIIVSGLGMREAATQAAITRLPPDVTLAFDPYAPALPAWM GKARQSGHETLLELPVEPTGYPAIDPGPLALLSGLSEIENRSRLETVLGRSGGYVGVLATAAGRFTDTPASLRGLLDALK SRGLLYVHRGSPTAVNVNGDAAPPVNIVTARIDDTPNQRAIDARLEYLGQVARAQGYAIGVVGASPVALYRLNRWLGGLE GEGLVLAPASAVMVTGERRATQ >Mature_582_residues MVKIPSLPKSGKPSRPGASRPGAAADKPSRSPAALSSAAEDDIDVGDDLEFDIAPDPLPPPTPLPRSSAGGGLGEALRGL FRRTDDPDTAPHYYDLRAEPRERRGWLMAGAALLLAGGLVGAWMTVRSPDEPRTPGPVNSGASITLPLPAAEGRLGLLTP PGEAGQTSDRSAQRRPWLSEAAPSAMPDAGQDPAQDRAEPPQPAAPAAIAAPPPTPEPASPPAAAVPPPVAPPPTVASPT PAAPPAVAPAPAVTAAPPPAPAAGAFQRPSGALLPSEVAVALPRGSSPPLEEGFRPGRTPSYNDLPAPGTFPAPSLGDAP SSDLLRSSEHGLLPVIAADGRMPWRTYARPFTGDATRPRVAIIVSGLGMREAATQAAITRLPPDVTLAFDPYAPALPAWM GKARQSGHETLLELPVEPTGYPAIDPGPLALLSGLSEIENRSRLETVLGRSGGYVGVLATAAGRFTDTPASLRGLLDALK SRGLLYVHRGSPTAVNVNGDAAPPVNIVTARIDDTPNQRAIDARLEYLGQVARAQGYAIGVVGASPVALYRLNRWLGGLE GEGLVLAPASAVMVTGERRATQ
Specific function: Unknown
COG id: COG2861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59676; Mature: 59676
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIPSLPKSGKPSRPGASRPGAAADKPSRSPAALSSAAEDDIDVGDDLEFDIAPDPLPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEECCCCCCCCC PTPLPRSSAGGGLGEALRGLFRRTDDPDTAPHYYDLRAEPRERRGWLMAGAALLLAGGLV CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHH GAWMTVRSPDEPRTPGPVNSGASITLPLPAAEGRLGLLTPPGEAGQTSDRSAQRRPWLSE HHEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHCCCHHH AAPSAMPDAGQDPAQDRAEPPQPAAPAAIAAPPPTPEPASPPAAAVPPPVAPPPTVASPT CCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAPPAVAPAPAVTAAPPPAPAAGAFQRPSGALLPSEVAVALPRGSSPPLEEGFRPGRTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCC SYNDLPAPGTFPAPSLGDAPSSDLLRSSEHGLLPVIAADGRMPWRTYARPFTGDATRPRV CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCEE AIIVSGLGMREAATQAAITRLPPDVTLAFDPYAPALPAWMGKARQSGHETLLELPVEPTG EEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCHHHEECCCCCCC YPAIDPGPLALLSGLSEIENRSRLETVLGRSGGYVGVLATAAGRFTDTPASLRGLLDALK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH SRGLLYVHRGSPTAVNVNGDAAPPVNIVTARIDDTPNQRAIDARLEYLGQVARAQGYAIG HCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE VVGASPVALYRLNRWLGGLEGEGLVLAPASAVMVTGERRATQ EECCCCHHHHHHHHHHCCCCCCCEEEECCCEEEEECCHHCCC >Mature Secondary Structure MVKIPSLPKSGKPSRPGASRPGAAADKPSRSPAALSSAAEDDIDVGDDLEFDIAPDPLPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEECCCCCCCCC PTPLPRSSAGGGLGEALRGLFRRTDDPDTAPHYYDLRAEPRERRGWLMAGAALLLAGGLV CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHH GAWMTVRSPDEPRTPGPVNSGASITLPLPAAEGRLGLLTPPGEAGQTSDRSAQRRPWLSE HHEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHCCCHHH AAPSAMPDAGQDPAQDRAEPPQPAAPAAIAAPPPTPEPASPPAAAVPPPVAPPPTVASPT CCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAPPAVAPAPAVTAAPPPAPAAGAFQRPSGALLPSEVAVALPRGSSPPLEEGFRPGRTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCC SYNDLPAPGTFPAPSLGDAPSSDLLRSSEHGLLPVIAADGRMPWRTYARPFTGDATRPRV CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCEE AIIVSGLGMREAATQAAITRLPPDVTLAFDPYAPALPAWMGKARQSGHETLLELPVEPTG EEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCHHHEECCCCCCC YPAIDPGPLALLSGLSEIENRSRLETVLGRSGGYVGVLATAAGRFTDTPASLRGLLDALK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH SRGLLYVHRGSPTAVNVNGDAAPPVNIVTARIDDTPNQRAIDARLEYLGQVARAQGYAIG HCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE VVGASPVALYRLNRWLGGLEGEGLVLAPASAVMVTGERRATQ EECCCCHHHHHHHHHHCCCCCCCEEEECCCEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA