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The map label for this gene is sdhD [H]

Identifier: 83592539

GI number: 83592539

Start: 1420403

End: 1420789

Strand: Direct

Name: sdhD [H]

Synonym: Rru_A1203

Alternate gene names: 83592539

Gene position: 1420403-1420789 (Clockwise)

Preceding gene: 83592538

Following gene: 83592540

Centisome position: 32.63

GC content: 61.5

Gene sequence:

>387_bases
ATGTCCCTACGCTCTCCGCTCGGCCGCGCGCGCGGCCTGGGTTCCGCCAAGGCGGGTGCCGCCAATCACTGGATGGCCGA
GCGCCTTCCGGCCATCGCCTTGGTGCCGCTGGCGCTGTGGTTCGTTTTCGTCGCCATCATCAGCAATCTGGGGGCGAGCT
ACGCCCAGATTCAGGCTTTCATGGCGGTGCCGTTGAACGCCACCTTGATGCTGCTGACGGTGTTCTGCGCCTTTTTCCAC
GGCGCGCTCGGCCTGATCGTGATTATTGAAGATTACGTCCAAAATCACGCCGTCAAGAACGCTTTGGTCTTCGGAACCAA
GCTCTACGCCTTGTTCGGTGCCGTTCTGGCCGCCGTCTCCATCCTCAAGCTGACTTTCGGGGGCTAA

Upstream 100 bases:

>100_bases
CTGCGCAAGACGGGGGCCGCCGCCGTCGGCGCGGCGATCGTCCTGTCGCTACTGGCCTGGACGGTCGGTCTGTCGGCTGT
CGGCTGAGGAGAAAGCAAAA

Downstream 100 bases:

>100_bases
GTCCGATGGCATCCTACGAGATTGTCGACCACGAATATGATGCTTTGGTCGTTGGCGCCGGTGGCGCCGGCCTGCGCGCC
ACCTTCGGTCTGGTCGAACA

Product: succinate dehydrogenase subunit D

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSLRSPLGRARGLGSAKAGAANHWMAERLPAIALVPLALWFVFVAIISNLGASYAQIQAFMAVPLNATLMLLTVFCAFFH
GALGLIVIIEDYVQNHAVKNALVFGTKLYALFGAVLAAVSILKLTFGG

Sequences:

>Translated_128_residues
MSLRSPLGRARGLGSAKAGAANHWMAERLPAIALVPLALWFVFVAIISNLGASYAQIQAFMAVPLNATLMLLTVFCAFFH
GALGLIVIIEDYVQNHAVKNALVFGTKLYALFGAVLAAVSILKLTFGG
>Mature_127_residues
SLRSPLGRARGLGSAKAGAANHWMAERLPAIALVPLALWFVFVAIISNLGASYAQIQAFMAVPLNATLMLLTVFCAFFHG
ALGLIVIIEDYVQNHAVKNALVFGTKLYALFGAVLAAVSILKLTFGG

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 13546; Mature: 13415

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRSPLGRARGLGSAKAGAANHWMAERLPAIALVPLALWFVFVAIISNLGASYAQIQAF
CCCCCHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MAVPLNATLMLLTVFCAFFHGALGLIVIIEDYVQNHAVKNALVFGTKLYALFGAVLAAVS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKLTFGG
HHHHHCCC
>Mature Secondary Structure 
SLRSPLGRARGLGSAKAGAANHWMAERLPAIALVPLALWFVFVAIISNLGASYAQIQAF
CCCCHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MAVPLNATLMLLTVFCAFFHGALGLIVIIEDYVQNHAVKNALVFGTKLYALFGAVLAAVS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKLTFGG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA