Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83592444

Identifier: 83592444

GI number: 83592444

Start: 1302568

End: 1303155

Strand: Direct

Name: 83592444

Synonym: Rru_A1108

Alternate gene names: NA

Gene position: 1302568-1303155 (Clockwise)

Preceding gene: 83592443

Following gene: 83592448

Centisome position: 29.92

GC content: 67.18

Gene sequence:

>588_bases
ATGGCCAAGAAATCCGCCGCGCCCGCCAAGGGCAAACCCGCCGCCCCCGCCCCGGCCAAGGGAGAGGGGATGGGCTGGGG
CATGCGTATCGGCCTGCTGCTGGTGGCGATCCCGGCCGTCGTCTTCATGGGGCCGACGGTGTTGTTGGTCTGTATCGCCC
TGCTGCCGACCGGTGTCGCCTTCATTTCCGACCGCTCGATCAGCAAGACGGGGTGGCTGTGCGTCGGCGGCCTCAATCTC
GCCGGCGCCGTTCCCTTCATCGCCACCTTGTGGGAGAAGGGCAACACGGTTGAAGCGGCGCTGCGGCTGCTGACCGATGT
GCTGACCATCCTCATCATCTATGGCTCGGCCGGTGTCGGCTGGCTGCTCTATATCTCGATCCCCCAGCTTCTCGGAGCGT
TCATGGCGATGACCGCCGGCCACAGGGTGGCGACGATGAAGGCCCAGCAGGACTCGTTGATCGAGGAATGGGGCACAGAG
GTCAAGCAGGGCGCCGAAGAGGCGGTGGCCGAATTCATGCGGCGCGGCCGGGTGACCGACTTCGCCGAACCGAGGAAGTC
CGCCGCCCAGCCGCCGCGTCGGGGGTAG

Upstream 100 bases:

>100_bases
CGAGACCTCGGAGCGCCTGGGCCAGCAAACGGCGGCGTCGGTTTCCGTGGCCATCGCCATCGTCACCATCGTGTTCGTCT
CTATTTCCAGGCTGATTTAG

Downstream 100 bases:

>100_bases
GGCGATGAGCGGGGAAAAGCGCCCCTTTGGGGAAACCCCTCCTGATCCTTCACGCAAGGACCGGGAACGCGAAGCCGCTG
TCGGCGTCCTTCAAAGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MAKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVAFISDRSISKTGWLCVGGLNL
AGAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVGWLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTE
VKQGAEEAVAEFMRRGRVTDFAEPRKSAAQPPRRG

Sequences:

>Translated_195_residues
MAKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVAFISDRSISKTGWLCVGGLNL
AGAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVGWLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTE
VKQGAEEAVAEFMRRGRVTDFAEPRKSAAQPPRRG
>Mature_194_residues
AKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVAFISDRSISKTGWLCVGGLNLA
GAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVGWLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTEV
KQGAEEAVAEFMRRGRVTDFAEPRKSAAQPPRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20528; Mature: 20396

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISDRSISKTGWLCVGGLNLAGAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVG
HHCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
WLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTEVKQGAEEAVAEFMRRGRVTD
HHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FAEPRKSAAQPPRRG
CHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISDRSISKTGWLCVGGLNLAGAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVG
HHCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
WLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTEVKQGAEEAVAEFMRRGRVTD
HHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FAEPRKSAAQPPRRG
CHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA