| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592444
Identifier: 83592444
GI number: 83592444
Start: 1302568
End: 1303155
Strand: Direct
Name: 83592444
Synonym: Rru_A1108
Alternate gene names: NA
Gene position: 1302568-1303155 (Clockwise)
Preceding gene: 83592443
Following gene: 83592448
Centisome position: 29.92
GC content: 67.18
Gene sequence:
>588_bases ATGGCCAAGAAATCCGCCGCGCCCGCCAAGGGCAAACCCGCCGCCCCCGCCCCGGCCAAGGGAGAGGGGATGGGCTGGGG CATGCGTATCGGCCTGCTGCTGGTGGCGATCCCGGCCGTCGTCTTCATGGGGCCGACGGTGTTGTTGGTCTGTATCGCCC TGCTGCCGACCGGTGTCGCCTTCATTTCCGACCGCTCGATCAGCAAGACGGGGTGGCTGTGCGTCGGCGGCCTCAATCTC GCCGGCGCCGTTCCCTTCATCGCCACCTTGTGGGAGAAGGGCAACACGGTTGAAGCGGCGCTGCGGCTGCTGACCGATGT GCTGACCATCCTCATCATCTATGGCTCGGCCGGTGTCGGCTGGCTGCTCTATATCTCGATCCCCCAGCTTCTCGGAGCGT TCATGGCGATGACCGCCGGCCACAGGGTGGCGACGATGAAGGCCCAGCAGGACTCGTTGATCGAGGAATGGGGCACAGAG GTCAAGCAGGGCGCCGAAGAGGCGGTGGCCGAATTCATGCGGCGCGGCCGGGTGACCGACTTCGCCGAACCGAGGAAGTC CGCCGCCCAGCCGCCGCGTCGGGGGTAG
Upstream 100 bases:
>100_bases CGAGACCTCGGAGCGCCTGGGCCAGCAAACGGCGGCGTCGGTTTCCGTGGCCATCGCCATCGTCACCATCGTGTTCGTCT CTATTTCCAGGCTGATTTAG
Downstream 100 bases:
>100_bases GGCGATGAGCGGGGAAAAGCGCCCCTTTGGGGAAACCCCTCCTGATCCTTCACGCAAGGACCGGGAACGCGAAGCCGCTG TCGGCGTCCTTCAAAGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVAFISDRSISKTGWLCVGGLNL AGAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVGWLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTE VKQGAEEAVAEFMRRGRVTDFAEPRKSAAQPPRRG
Sequences:
>Translated_195_residues MAKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVAFISDRSISKTGWLCVGGLNL AGAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVGWLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTE VKQGAEEAVAEFMRRGRVTDFAEPRKSAAQPPRRG >Mature_194_residues AKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVAFISDRSISKTGWLCVGGLNLA GAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVGWLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTEV KQGAEEAVAEFMRRGRVTDFAEPRKSAAQPPRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20528; Mature: 20396
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FISDRSISKTGWLCVGGLNLAGAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVG HHCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCH WLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTEVKQGAEEAVAEFMRRGRVTD HHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FAEPRKSAAQPPRRG CHHHHHHHCCCCCCC >Mature Secondary Structure AKKSAAPAKGKPAAPAPAKGEGMGWGMRIGLLLVAIPAVVFMGPTVLLVCIALLPTGVA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FISDRSISKTGWLCVGGLNLAGAVPFIATLWEKGNTVEAALRLLTDVLTILIIYGSAGVG HHCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCH WLLYISIPQLLGAFMAMTAGHRVATMKAQQDSLIEEWGTEVKQGAEEAVAEFMRRGRVTD HHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FAEPRKSAAQPPRRG CHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA