| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592443
Identifier: 83592443
GI number: 83592443
Start: 1300534
End: 1302567
Strand: Direct
Name: 83592443
Synonym: Rru_A1107
Alternate gene names: NA
Gene position: 1300534-1302567 (Clockwise)
Preceding gene: 83592442
Following gene: 83592444
Centisome position: 29.88
GC content: 65.44
Gene sequence:
>2034_bases ATGGCCCAGGAACCGGAGGTGGCGGCGACGGCGAGCGGTGGTGGCGAACCACCGGTCTTGCGCGACCGCTATGAGATCGA CCCCGCCAAGCCCCTGCCGGGGCTGGATATGCCCAATGCCCACGCCTTCCGCGTGACCGACAAGCGCAACGGCCAGCGCG CGCTCTATGCGCTGGTCTGCGACGGGCCGCTGCCACCGCGCACCAGCGCCATGCGCACGCTGCGCGGCGTCAGCGCCCCC GGGCTGGTGCCCTTGGTCGAATGGGGCGTGGTCGATTGGCCGCCGATCGACGGGCGCTGCGTCGCCGTGGTTTACGAACG CCCCCTGGGCGGCCGGCTGATGAAAAGCGAGGACGAGGTTTTCCAGCCCGTTCCCGATCAATCCTTCGCCAAAATCATCT GGCGGCCGCTGATCGCCGGGCTGACCGAGCTGCAGGGGCGCTCCATCGCCCACCGGGCGATTCGGCCGACCAATCTTTAC TGGATGGACCGCGAGCAGACGCGGATCGCCTTGGGCGACTGCACCACCTCGCCCCCGGCCTATGACCAGCCGGTGGGCTG TGAAACCATCGAAAGCGGCATGGCCAGCCGGGAAGGGCGGGGCGGCGGCTATTATCCCGATGACATGTACGCGCTAGGCG CCACCTTGGTGATCGCCTCGGTCGGCAACGACCCTTTGGCCGGGGTCGCCCCCGAAGCCATCGTCAGCGCCAAGATCGCC AATGGCTCCTATTCCACCGTGGTCGGCGACGAACGGGTGCCGCTGGGCGTCATCGAACTGGTGCGCGGTCTTTTGGTCGA CGATCAGGAACAACGCTGGTCGCTGGAAACCATCGAGCTGTGGACCAACGGCCGGCGGATGAACCCGATGCAGACCCGCC AGGAAAAGCGGGCCCAGCGGCCCTTCGTGTTCCGGGGGGCGGAATATTACACCCGCCGCGCCCTGGCCCACGCCCTGTCG CAGGATTGGGAAACGGGCGTTCAGCCGATCATGGAAGGCAAGGTGGAAACCTGGCTGCGTCGCGGCCTGGAACTGGGCGA TCTGGCCGATAGCGTTGGCAATGTGGTGCGGGCGGCCAATGTCACGGCCAAGGATGTCGGGCCGGTTCGCGATATGGCGG TGGCCGCCGTCCTTACCCTGATGGATCCGCGCGCGCCGATCCGCTATGGCAAGGTGCGCGTCCATATGGAGGCCTTCGGC ACGGCGATGGCCTGCACCCTGGCGATGCGCGGCGATATCCGGCCCTATATCGATCTGATCCAGCGCGATATCACCAAGAC CTGGATCGCCGCCCAAGAGGCCTTTTCCAGCGACTTCGGGCGCTTCGACGCCGAGTTCAAGGATCTGCGGACCTATTTGG TCCAAACGAGCAAGGGCGGCGGCATCGAGCGCTGCCTTTATGAAATGAACGAATCGCTGCCCTGTCGCAGCGCCTTGTTG CGCAATCAATGCGTTCTGGAGATCGGCGATCTGCTGCCCGCCCTGGAATGGGTGGCGGCCAAGGCCGATCAAAAGCAATC GCCCGCCGATCGCCACGTCGTCGCCTTTGTCGCCGCCCGCTATCCCAAGGACACCATGGGGCAGATCCATGCCTTGAACG ACGAGGATCCGCGCAAGGCGGCGCTGGGCGTGCTCAGCCTGTTGGCCGTTTTGCAATGGAAGCTTGGTCCCGAGTCCCTT CCTGGTCTGGCCGCTTGGCTGGGGAGCCAGATGGCGCCGGCGATCAACAGCTACCACAGCCGCGAAAGGCGCAAGCGCAT CGAAAAGGAACTGCCCAAGGTGGTGCGCAAGGGCAGCCTTCCCGATCTCTATTTCCTGCTCGACGACTCAAAGGAGCGCC AGCTTGATCTTGACGGCTTCCTGGCCGCCCGCCAGCAATACGCCCAGGCCGCCCAACAGGTGGCGGCCTTGGAAAGCGGC AATTACCGGGTGAGCGAGACCTCGGAGCGCCTGGGCCAGCAAACGGCGGCGTCGGTTTCCGTGGCCATCGCCATCGTCAC CATCGTGTTCGTCTCTATTTCCAGGCTGATTTAG
Upstream 100 bases:
>100_bases TTCGGCTGCGGGCGGGGTCAAAAGACTTCTGAACCGGCGTGCTGTCCGTTAGTCTGGGTCGGGAGCGGGAACCCGTCCCG CTTCTGAGCAGGGAGACGGC
Downstream 100 bases:
>100_bases ATGGCCAAGAAATCCGCCGCGCCCGCCAAGGGCAAACCCGCCGCCCCCGCCCCGGCCAAGGGAGAGGGGATGGGCTGGGG CATGCGTATCGGCCTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 677; Mature: 676
Protein sequence:
>677_residues MAQEPEVAATASGGGEPPVLRDRYEIDPAKPLPGLDMPNAHAFRVTDKRNGQRALYALVCDGPLPPRTSAMRTLRGVSAP GLVPLVEWGVVDWPPIDGRCVAVVYERPLGGRLMKSEDEVFQPVPDQSFAKIIWRPLIAGLTELQGRSIAHRAIRPTNLY WMDREQTRIALGDCTTSPPAYDQPVGCETIESGMASREGRGGGYYPDDMYALGATLVIASVGNDPLAGVAPEAIVSAKIA NGSYSTVVGDERVPLGVIELVRGLLVDDQEQRWSLETIELWTNGRRMNPMQTRQEKRAQRPFVFRGAEYYTRRALAHALS QDWETGVQPIMEGKVETWLRRGLELGDLADSVGNVVRAANVTAKDVGPVRDMAVAAVLTLMDPRAPIRYGKVRVHMEAFG TAMACTLAMRGDIRPYIDLIQRDITKTWIAAQEAFSSDFGRFDAEFKDLRTYLVQTSKGGGIERCLYEMNESLPCRSALL RNQCVLEIGDLLPALEWVAAKADQKQSPADRHVVAFVAARYPKDTMGQIHALNDEDPRKAALGVLSLLAVLQWKLGPESL PGLAAWLGSQMAPAINSYHSRERRKRIEKELPKVVRKGSLPDLYFLLDDSKERQLDLDGFLAARQQYAQAAQQVAALESG NYRVSETSERLGQQTAASVSVAIAIVTIVFVSISRLI
Sequences:
>Translated_677_residues MAQEPEVAATASGGGEPPVLRDRYEIDPAKPLPGLDMPNAHAFRVTDKRNGQRALYALVCDGPLPPRTSAMRTLRGVSAP GLVPLVEWGVVDWPPIDGRCVAVVYERPLGGRLMKSEDEVFQPVPDQSFAKIIWRPLIAGLTELQGRSIAHRAIRPTNLY WMDREQTRIALGDCTTSPPAYDQPVGCETIESGMASREGRGGGYYPDDMYALGATLVIASVGNDPLAGVAPEAIVSAKIA NGSYSTVVGDERVPLGVIELVRGLLVDDQEQRWSLETIELWTNGRRMNPMQTRQEKRAQRPFVFRGAEYYTRRALAHALS QDWETGVQPIMEGKVETWLRRGLELGDLADSVGNVVRAANVTAKDVGPVRDMAVAAVLTLMDPRAPIRYGKVRVHMEAFG TAMACTLAMRGDIRPYIDLIQRDITKTWIAAQEAFSSDFGRFDAEFKDLRTYLVQTSKGGGIERCLYEMNESLPCRSALL RNQCVLEIGDLLPALEWVAAKADQKQSPADRHVVAFVAARYPKDTMGQIHALNDEDPRKAALGVLSLLAVLQWKLGPESL PGLAAWLGSQMAPAINSYHSRERRKRIEKELPKVVRKGSLPDLYFLLDDSKERQLDLDGFLAARQQYAQAAQQVAALESG NYRVSETSERLGQQTAASVSVAIAIVTIVFVSISRLI >Mature_676_residues AQEPEVAATASGGGEPPVLRDRYEIDPAKPLPGLDMPNAHAFRVTDKRNGQRALYALVCDGPLPPRTSAMRTLRGVSAPG LVPLVEWGVVDWPPIDGRCVAVVYERPLGGRLMKSEDEVFQPVPDQSFAKIIWRPLIAGLTELQGRSIAHRAIRPTNLYW MDREQTRIALGDCTTSPPAYDQPVGCETIESGMASREGRGGGYYPDDMYALGATLVIASVGNDPLAGVAPEAIVSAKIAN GSYSTVVGDERVPLGVIELVRGLLVDDQEQRWSLETIELWTNGRRMNPMQTRQEKRAQRPFVFRGAEYYTRRALAHALSQ DWETGVQPIMEGKVETWLRRGLELGDLADSVGNVVRAANVTAKDVGPVRDMAVAAVLTLMDPRAPIRYGKVRVHMEAFGT AMACTLAMRGDIRPYIDLIQRDITKTWIAAQEAFSSDFGRFDAEFKDLRTYLVQTSKGGGIERCLYEMNESLPCRSALLR NQCVLEIGDLLPALEWVAAKADQKQSPADRHVVAFVAARYPKDTMGQIHALNDEDPRKAALGVLSLLAVLQWKLGPESLP GLAAWLGSQMAPAINSYHSRERRKRIEKELPKVVRKGSLPDLYFLLDDSKERQLDLDGFLAARQQYAQAAQQVAALESGN YRVSETSERLGQQTAASVSVAIAIVTIVFVSISRLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74512; Mature: 74381
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQEPEVAATASGGGEPPVLRDRYEIDPAKPLPGLDMPNAHAFRVTDKRNGQRALYALVC CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEE DGPLPPRTSAMRTLRGVSAPGLVPLVEWGVVDWPPIDGRCVAVVYERPLGGRLMKSEDEV CCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHH FQPVPDQSFAKIIWRPLIAGLTELQGRSIAHRAIRPTNLYWMDREQTRIALGDCTTSPPA HCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCC YDQPVGCETIESGMASREGRGGGYYPDDMYALGATLVIASVGNDPLAGVAPEAIVSAKIA CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHEEEC NGSYSTVVGDERVPLGVIELVRGLLVDDQEQRWSLETIELWTNGRRMNPMQTRQEKRAQR CCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCC PFVFRGAEYYTRRALAHALSQDWETGVQPIMEGKVETWLRRGLELGDLADSVGNVVRAAN CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC VTAKDVGPVRDMAVAAVLTLMDPRAPIRYGKVRVHMEAFGTAMACTLAMRGDIRPYIDLI CCHHHCCHHHHHHHHHHHHHHCCCCCCEECEEEEEHHHHHHHHHHHHHHCCCCHHHHHHH QRDITKTWIAAQEAFSSDFGRFDAEFKDLRTYLVQTSKGGGIERCLYEMNESLPCRSALL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHH RNQCVLEIGDLLPALEWVAAKADQKQSPADRHVVAFVAARYPKDTMGQIHALNDEDPRKA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCEEECCCCCHHHH ALGVLSLLAVLQWKLGPESLPGLAAWLGSQMAPAINSYHSRERRKRIEKELPKVVRKGSL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDLYFLLDDSKERQLDLDGFLAARQQYAQAAQQVAALESGNYRVSETSERLGQQTAASVS CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHH VAIAIVTIVFVSISRLI HHHHHHHHHHHHHHHCC >Mature Secondary Structure AQEPEVAATASGGGEPPVLRDRYEIDPAKPLPGLDMPNAHAFRVTDKRNGQRALYALVC CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEE DGPLPPRTSAMRTLRGVSAPGLVPLVEWGVVDWPPIDGRCVAVVYERPLGGRLMKSEDEV CCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHH FQPVPDQSFAKIIWRPLIAGLTELQGRSIAHRAIRPTNLYWMDREQTRIALGDCTTSPPA HCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCC YDQPVGCETIESGMASREGRGGGYYPDDMYALGATLVIASVGNDPLAGVAPEAIVSAKIA CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHEEEC NGSYSTVVGDERVPLGVIELVRGLLVDDQEQRWSLETIELWTNGRRMNPMQTRQEKRAQR CCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCC PFVFRGAEYYTRRALAHALSQDWETGVQPIMEGKVETWLRRGLELGDLADSVGNVVRAAN CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC VTAKDVGPVRDMAVAAVLTLMDPRAPIRYGKVRVHMEAFGTAMACTLAMRGDIRPYIDLI CCHHHCCHHHHHHHHHHHHHHCCCCCCEECEEEEEHHHHHHHHHHHHHHCCCCHHHHHHH QRDITKTWIAAQEAFSSDFGRFDAEFKDLRTYLVQTSKGGGIERCLYEMNESLPCRSALL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHH RNQCVLEIGDLLPALEWVAAKADQKQSPADRHVVAFVAARYPKDTMGQIHALNDEDPRKA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCEEECCCCCHHHH ALGVLSLLAVLQWKLGPESLPGLAAWLGSQMAPAINSYHSRERRKRIEKELPKVVRKGSL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDLYFLLDDSKERQLDLDGFLAARQQYAQAAQQVAALESGNYRVSETSERLGQQTAASVS CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHH VAIAIVTIVFVSISRLI HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA